../../tmp/servers/virsirnadb/1583992727
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1736 | 1 | gcaaacaactatacatgata | 20 | |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 160 | .................... | 179 | 100 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 1417 | ___............_____ | 1428 | 60 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 4006 | ___..........a.ca... | 3990 | 70 |
| NC_013237.1 | Canine papillomavirus 6, complete genome | 7545 | _____...........ac.. | 7559 | 65 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 5164 | _______...........__ | 5174 | 55 |
| NC_005134.2 | Human papillomavirus type 96, complete genome | 776 | __..g.........ca..c. | 793 | 70 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 1322 | .g.........c.g..____ | 1337 | 65 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 4326 | ____.........gca..._ | 4340 | 60 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 7314 | .........atc..._____ | 7300 | 60 |
| NC_001605.1 | Mastomys natalensis papillomavirus, complete genome | 1628 | _____.c..........c._ | 1615 | 60 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 1997 | .t..........c.______ | 2010 | 60 |
| NC_014956.1 | Human papillomavirus type 134, complete genome | 123 | _..t.a........._____ | 110 | 60 |
| NC_014954.1 | Human papillomavirus type 131, complete genome | 1975 | _..t.t........._____ | 1962 | 60 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 461 | ____.........t..____ | 450 | 55 |
| NC_001591.1 | Human papillomavirus type 49, complete genome | 7081 | ________..........c. | 7092 | 55 |
| NC_001457.1 | Human papillomavirus type 4, complete genome | 2090 | ___..t........._____ | 2079 | 55 |
| NC_001457.1 | Human papillomavirus type 4, complete genome | 6105 | ___.........._______ | 6114 | 50 |
| NC_001619.1 | Canine oral papillomavirus, complete genome | 1398 | __________.......... | 1389 | 50 |
| NC_009752.1 | Bovine papillomavirus 8, complete genome | 3086 | ..........__________ | 3077 | 50 |
| NC_011531.1 | Chelonia mydas papillomavirus 1, complete genome | 623 | ..........__________ | 614 | 50 |
| NC_013117.1 | Francolinus leucoscepus papillomavirus 1, complete genome | 803 | ..........__________ | 794 | 50 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 6239 | ..........__________ | 6248 | 50 |
| NC_008184.1 | Tursiops truncatus papillomavirus 2, complete genome | 952 | ______..........____ | 943 | 50 |
| NC_001356.1 | Human papillomavirus - 1, complete genome | 7213 | .........a.c.tc..___ | 7229 | 65 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 5172 | _..c.at.g.........__ | 5188 | 65 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 4182 | ____.t.........ca.._ | 4196 | 60 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 3541 | .........a.c._______ | 3553 | 55 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 4826 | __.........cc.c..___ | 4840 | 60 |
| NC_003973.1 | Psittacus erithacus timneh papillomavirus, complete genome | 2674 | __.........gg.c..___ | 2688 | 60 |
| NC_003348.1 | Phocoena spinipinnis papillomavirus, complete genome | 1237 | .g.g.a........._____ | 1251 | 60 |
| NC_008188.1 | Human papillomavirus type 103, complete genome | 3464 | .........at.._______ | 3476 | 55 |
| NC_001587.1 | Human papillomavirus type 34, complete genome | 2270 | __.t.t........._____ | 2258 | 55 |