../../tmp/servers/virsirnadb/1652131321
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1723 | 1 | gcaaagacatctggacaaa | 19 | |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 448 | ................... | 466 | 100 |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 5645 | __.g.........a.a... | 5629 | 73 |
| NC_001678.1 | Rhesus monkey papillomavirus, complete genome | 456 | .........cg.....c.. | 474 | 84 |
| NC_001678.1 | Rhesus monkey papillomavirus, complete genome | 5858 | _..t.........a.a.g. | 5841 | 73 |
| NC_008188.1 | Human papillomavirus type 103, complete genome | 4953 | _............c.a.._ | 4937 | 78 |
| NC_001591.1 | Human papillomavirus type 49, complete genome | 3221 | _____............._ | 3233 | 68 |
| NC_014954.1 | Human papillomavirus type 131, complete genome | 6880 | _____............._ | 6892 | 68 |
| NC_001523.1 | Deer papillomavirus, complete genome | 7338 | _.........g....gg.. | 7355 | 78 |
| NC_008582.1 | Old World harvest mouse papillomavirus, complete genome | 5333 | _..c.........c.a... | 5316 | 78 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 2845 | .........a...c.____ | 2831 | 68 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 6367 | __.g.c..........c._ | 6382 | 68 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 6833 | ..t..c.........____ | 6819 | 68 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 5632 | ___..........c.ag.. | 5617 | 68 |
| NC_014955.1 | Human papillomavirus type 132, complete genome | 5143 | ___..........t.a.._ | 5129 | 68 |
| NC_001595.1 | Human papillomavirus type 7, complete genome | 4700 | ....ta.........____ | 4686 | 68 |
| NC_011531.1 | Chelonia mydas papillomavirus 1, complete genome | 3517 | _______..........._ | 3507 | 57 |
| NC_011765.1 | Erinaceus europaeus papillomavirus, complete genome | 2030 | _..........._______ | 2020 | 57 |
| NC_008189.1 | Human papillomavirus type 101, complete genome | 4925 | _..g.c.........a.c. | 4908 | 73 |
| NC_001531.1 | Human papillomavirus - 5, complete genome | 7054 | _.........g.a..ag.. | 7071 | 73 |
| NC_001531.1 | Human papillomavirus - 5, complete genome | 5287 | _..........ca..____ | 5274 | 63 |
| NC_003348.1 | Phocoena spinipinnis papillomavirus, complete genome | 5027 | _.........a..a.ac.. | 5010 | 73 |
| NC_015267.1 | Camelus dromedarius papillomavirus type 1, complete genome | 6641 | _.........g.t..ag.. | 6658 | 73 |
| NC_004765.1 | Felis domesticus papillomavirus type 1, complete genome | 4675 | ___..........t.ac.. | 4690 | 68 |
| NC_004765.1 | Felis domesticus papillomavirus type 1, complete genome | 747 | ..g.........c._____ | 760 | 63 |
| NC_004765.1 | Felis domesticus papillomavirus type 1, complete genome | 6155 | _.........g.c.c.t._ | 6139 | 68 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 3498 | __..t.t.........___ | 3485 | 63 |
| NC_014143.1 | Bettongia penicillata papillomavirus 1, complete genome | 7518 | _____.........ca... | 7531 | 63 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 6927 | _.........g.a..____ | 6940 | 63 |
| NC_001356.1 | Human papillomavirus - 1, complete genome | 2796 | .........g.._______ | 2807 | 57 |
| NC_001691.1 | Human papillomavirus type 50, complete genome | 3069 | ______.a.........._ | 3080 | 57 |
| NC_003973.1 | Psittacus erithacus timneh papillomavirus, complete genome | 2654 | _______..g......... | 2665 | 57 |
| NC_003973.1 | Psittacus erithacus timneh papillomavirus, complete genome | 1698 | _...t.ggc........._ | 1714 | 68 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 3410 | ___.g..........____ | 3399 | 57 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 6973 | _______..........__ | 6982 | 52 |
| NC_001457.1 | Human papillomavirus type 4, complete genome | 106 | _____.c..........__ | 95 | 57 |
| NC_001524.1 | European elk papillomavirus, complete genome | 1228 | _____..........____ | 1237 | 52 |
| NC_004500.1 | Human papillomavirus type 92, complete genome | 6963 | ________.........._ | 6954 | 52 |
| NC_009752.1 | Bovine papillomavirus 8, complete genome | 3133 | _..........________ | 3124 | 52 |
| NC_012213.1 | Human papillomavirus type 108, complete genome | 4099 | _______..........__ | 4090 | 52 |
| NC_012486.1 | Human papillomavirus type 112, complete genome | 3940 | _______..........__ | 3931 | 52 |
| NC_015268.1 | Camelus dromedarius papillomavirus type 2, complete genome | 5787 | .........._________ | 5796 | 52 |
| NC_007612.1 | Bovine papillomavirus 7, complete genome | 4073 | _____..........____ | 4064 | 52 |
| NC_001619.1 | Canine oral papillomavirus, complete genome | 1205 | .........gg.a..____ | 1219 | 63 |
| NC_001619.1 | Canine oral papillomavirus, complete genome | 7637 | ______.g.........t. | 7625 | 57 |
| NC_001693.1 | Human papillomavirus type 60, complete genome | 6587 | ..t.ga.........____ | 6573 | 63 |
| NC_013117.1 | Francolinus leucoscepus papillomavirus 1, complete genome | 1089 | ____.........cg..__ | 1077 | 57 |
| NC_013117.1 | Francolinus leucoscepus papillomavirus 1, complete genome | 3939 | _.g.g........._____ | 3951 | 57 |
| NC_012485.1 | Human papillomavirus type 109, complete genome | 2551 | ____.........c.g.__ | 2563 | 57 |