../../tmp/servers/virsirnadb/550196086
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1799 | 1 | gcatcactacaatgaca | 17 | |
| M33854.1 | CXA3CG Coxsackievirus B3 (CVB3) complete genome | 3272 | ................. | 3288 | 100 |
| M16572.1 | CXA3G Coxsackievirus B3, complete genome | 3271 | ................. | 3287 | 100 |
| M16572.1 | CXA3G Coxsackievirus B3, complete genome | 3917 | _.c..........t.._ | 3903 | 76 |
| M88483.1 | CXAB3CG Coxsackievirus B3 mRNA, complete genome | 3273 | ................. | 3289 | 100 |
| U57056.1 | CXU57056 Coxsackievirus B3 Woodruff variant, complete genome | 3273 | ................. | 3289 | 100 |
| AF231763.1 | Coxsackievirus B3 strain 31-1-93, complete genome | 3273 | ................. | 3289 | 100 |
| AF231764.1 | Coxsackievirus B3 strain P, complete genome | 3273 | ................. | 3289 | 100 |
| AF231765.1 | Coxsackievirus B3 strain PD, complete genome | 3273 | ................. | 3289 | 100 |
| AY752945.1 | Human coxsackievirus B3 strain 0, complete genome | 3273 | ................. | 3289 | 100 |
| AY752946.1 | Human coxsackievirus B3 strain 20, complete genome | 3273 | ................. | 3289 | 100 |
| AY752944.2 | Human coxsackievirus B3 strain 28, complete genome | 3273 | ................. | 3289 | 100 |
| AY896762.1 | Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein | 3253 | .......c......... | 3269 | 94 |
| FJ357838.1 | Human coxsackievirus B3 strain GZ803, complete genome | 3275 | .......c......... | 3291 | 94 |
| GU109481.1 | Human coxsackievirus B3 strain SSM-CVB3, complete genome | 3270 | .......c......... | 3286 | 94 |
| X00595.1 | Poliovirus type 2 genome (strain Sabin 2 (P712, Ch, 2ab)) | 5038 | __.............__ | 5050 | 76 |
| V01148.1 | Genome of human poliovirus type 1 (Mahoney strain). (One of two versi | 5034 | __.............__ | 5046 | 76 |
| V01150.1 | Human poliovirus strain Sabin 1 complete genome, strain Sabin 1 | 5039 | __.............__ | 5051 | 76 |
| AF462418.1 | Human poliovirus 1 99/056-252-14, complete genome | 5039 | __.............__ | 5051 | 76 |
| AF462419.1 | Human poliovirus 1 RUS-1161-96-001, complete genome | 5039 | __.............__ | 5051 | 76 |
| AY184219.1 | Human poliovirus 1 strain Sabin 1, complete genome | 5039 | __.............__ | 5051 | 76 |
| AY184220.1 | Human poliovirus 2 strain Sabin 2, complete genome | 5038 | __.............__ | 5050 | 76 |
| AF541919.1 | Human poliovirus 3 isolate PV3/NOR/01/8 polyprotein mRNA, complete cd | 5020 | __.............__ | 5032 | 76 |
| AY177685.1 | Human poliovirus 2, complete genome | 5038 | __.............__ | 5050 | 76 |
| AY278549.1 | Human poliovirus 2 isolate P2S/Mog65-3 (20120), complete genome | 5038 | __.............__ | 5050 | 76 |
| AY278550.1 | Human poliovirus 2 isolate P2S/Mog65-1 (20003), complete genome | 5038 | __.............__ | 5050 | 76 |
| AY278552.1 | Human poliovirus 2 isolate P2S/Mog65-2 (20077), complete genome | 5038 | __.............__ | 5050 | 76 |
| AF499642.1 | Human coxsackievirus A20 strain IH35, complete genome | 5035 | __.............__ | 5047 | 76 |
| AF465514.1 | Human coxsackievirus A20 strain IH Pool 35, complete genome | 5035 | __.............__ | 5047 | 76 |
| AF538840.1 | Human poliovirus 1 isolate TCDCE01-135, complete genome | 5009 | __.............__ | 5021 | 76 |
| AF538841.1 | Human poliovirus 1 isolate TCDC01-113, complete genome | 5039 | __.............__ | 5051 | 76 |
| AF538842.1 | Human poliovirus 1 isolate TCDC01-330, complete genome | 5031 | __.............__ | 5043 | 76 |
| AF538843.1 | Human poliovirus 1 isolate TCDC01-861, complete genome | 5031 | __.............__ | 5043 | 76 |
| AF111966.2 | Human poliovirus 1 isolate CHN-Hainan/93-2, complete genome | 5043 | __.............__ | 5055 | 76 |
| AY560657.1 | Human poliovirus 1 strain Brunhilde, complete genome | 5043 | __.............__ | 5055 | 76 |
| AY928383.1 | Human poliovirus 1 isolate d261-2002037607 polyprotein gene, complete | 5031 | __.............__ | 5043 | 76 |
| AY928384.1 | Human poliovirus 1 isolate d224-2002037606 polyprotein gene, complete | 5031 | __.............__ | 5043 | 76 |
| AY928385.1 | Human poliovirus 1 isolate d054-2002037604 polyprotein gene, complete | 5031 | __.............__ | 5043 | 76 |
| AY928386.1 | Human poliovirus 1 isolate d179-2002037605 polyprotein gene, complete | 5031 | __.............__ | 5043 | 76 |
| AY928387.1 | Human poliovirus 1 isolate d018-2002037602 polyprotein gene, complete | 5031 | __.............__ | 5043 | 76 |
| AY948201.1 | Human poliovirus 2 isolate CHN1025 polyprotein gene, complete cds | 5039 | __.............__ | 5051 | 76 |
| DQ205099.1 | Human poliovirus 2 clone S2R9, complete genome | 5038 | __.............__ | 5050 | 76 |
| DQ890385.1 | Human poliovirus 2 strain NIE0210766, complete genome | 5038 | __.............__ | 5050 | 76 |
| DQ890386.1 | Human poliovirus 2 strain NIE0110767, complete genome | 5040 | __.............__ | 5052 | 76 |
| DQ890387.1 | Human poliovirus 2 strain USA9810768, complete genome | 5038 | __.............__ | 5050 | 76 |
| EF456707.1 | Human poliovirus 3 isolate K/2002 polyprotein gene, complete cds | 4990 | __.............__ | 5002 | 76 |
| EF555645.1 | Human enterovirus 102, complete genome | 5036 | __.............__ | 5048 | 76 |
| EF682343.1 | Human poliovirus 1 strain USA10774 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682344.1 | Human poliovirus 1 strain USA10775 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682345.1 | Human poliovirus 1 strain USA10773 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682346.1 | Human poliovirus 1 strain USA10780 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682347.1 | Human poliovirus 1 strain USA10781 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682348.1 | Human poliovirus 1 strain USA10782 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682349.1 | Human poliovirus 1 strain USA10771 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682350.1 | Human poliovirus 1 strain USA10772 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682351.1 | Human poliovirus 1 strain USA10778 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682352.1 | Human poliovirus 1 strain USA10770 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682353.1 | Human poliovirus 1 strain USA10777 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682354.1 | Human poliovirus 1 strain USA10779 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682355.1 | Human poliovirus 1 strain USA10776 polyprotein gene, complete cds | 5013 | __.............__ | 5025 | 76 |
| EF682356.1 | Human poliovirus 1 strain USA10784, complete genome | 5039 | __.............__ | 5051 | 76 |
| EF682357.1 | Human poliovirus 1 strain USA10785, complete genome | 5039 | __.............__ | 5051 | 76 |
| EF682358.1 | Human poliovirus 1 strain USA10783, complete genome | 5039 | __.............__ | 5051 | 76 |
| EF682359.1 | Human poliovirus 1 strain USA10786, complete genome | 5039 | __.............__ | 5051 | 76 |
| EU794953.1 | Human poliovirus 1 isolate A21 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794954.1 | Human poliovirus 1 isolate A49 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794955.1 | Human poliovirus 1 isolate A63 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794956.1 | Human poliovirus 1 isolate A84 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794957.1 | Human poliovirus 1 isolate A88 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794958.1 | Human poliovirus 1 isolate A91 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794959.1 | Human poliovirus 1 isolate A102 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794960.1 | Human poliovirus 1 isolate A105 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794961.1 | Human poliovirus 1 isolate A118 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794962.1 | Human poliovirus 1 isolate A199 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794963.1 | Human poliovirus 1 isolate A449 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| EU794964.1 | Human poliovirus 1 isolate A649 polyprotein gene, complete cds | 4991 | __.............__ | 5003 | 76 |
| FJ769378.1 | Human poliovirus 1 strain CHN8184/GZ/CHN/2004, complete genome | 5039 | __.............__ | 5051 | 76 |
| FJ769379.1 | Human poliovirus 1 strain CHN8229-1/GZ/CHN/2004, complete genome | 5039 | __.............__ | 5051 | 76 |
| FJ769380.1 | Human poliovirus 1 strain CHN8229-2/GZ/CHN/2004, complete genome | 5039 | __.............__ | 5051 | 76 |
| FJ769381.1 | Human poliovirus 1 strain CHN8229-3/GZ/CHN/2004, complete genome | 5039 | __.............__ | 5051 | 76 |
| FJ769382.1 | Human poliovirus 1 strain CHN8233c/GZ/CHN/2004, complete genome | 5039 | __.............__ | 5051 | 76 |
| FJ769383.1 | Human poliovirus 1 strain CHN8225c/GZ/CHN/2004, complete genome | 5039 | __.............__ | 5051 | 76 |
| FJ769384.1 | Human poliovirus 1 strain CHN8248c/GZ/CHN/2004, complete genome | 5039 | __.............__ | 5051 | 76 |
| FJ769385.1 | Human poliovirus 1 strain CHN8264c/GZ/CHN/2004, complete genome | 5039 | __.............__ | 5051 | 76 |
| FJ898290.1 | Human poliovirus 2 strain Sabine 2 isolate CHN3024/HN/CHN/1999, compl | 5038 | __.............__ | 5050 | 76 |
| HM107832.1 | Human poliovirus 2 isolate CHN1054, complete genome | 5038 | __.............__ | 5050 | 76 |
| HM107833.1 | Human poliovirus 2 isolate CHN1078, complete genome | 5038 | __.............__ | 5050 | 76 |
| HM107834.1 | Human poliovirus 2 isolate CHN3219, complete genome | 5038 | __.............__ | 5050 | 76 |
| HM107835.1 | Human poliovirus 2 isolate CHN8316, complete genome | 5038 | __.............__ | 5050 | 76 |
| S76772.1 | polyprotein [Coxsackie B4 virus CB4, host=mice, E2, originally derive | 3913 | ___............._ | 3901 | 76 |
| AF311939.1 | Human coxsackievirus B4 strain E2 variant, complete genome | 3913 | ___............._ | 3901 | 76 |
| AB426611.1 | Human enterovirus 97 genomic RNA, complete genome, strain: DT94-0227 | 3929 | ___............._ | 3917 | 76 |
| AF499638.1 | Human coxsackievirus A15 strain G9, complete genome | 5040 | __............___ | 5051 | 70 |
| AF465512.1 | Human coxsackievirus A15 strain G-9, complete genome | 5040 | __............___ | 5051 | 70 |
| AY843298.1 | Human enterovirus 80 strain USA/CA67-10387, complete genome | 1560 | .........t.g..g.. | 1544 | 82 |
| AJ276224.1 | Human echovirus 11 genomic RNA for polyprotein | 3949 | _.c..........a.._ | 3935 | 76 |
| AY302556.1 | Human echovirus 33 strain Toluca-3 complete genome | 3913 | _.c..........t.._ | 3899 | 76 |
| AY843301.1 | Human enterovirus 83 strain USA/CA76-10392, complete genome | 3913 | _.c..........c.._ | 3899 | 76 |
| X00596.1 | Poliovirus type 3 mRNA (vaccine strain Sabin 3 (Leon 12a1b)) | 5032 | __..t..........__ | 5044 | 70 |
| X00925.1 | Poliovirus type 3 leon 12 a1b sequence (P3/Leon 12 a1b) | 5030 | __..t..........__ | 5042 | 70 |
| K01392.1 | POL3L37 Poliovirus P3/Leon/37 (type 3), complete genome | 5030 | __..t..........__ | 5042 | 70 |
| AY184221.1 | Human poliovirus 3 strain Sabin 3, complete genome | 5030 | __..t..........__ | 5042 | 70 |
| AF448783.1 | Human poliovirus 2 strain EGY93-034, complete genome | 5040 | __..t..........__ | 5052 | 70 |
| AF499636.1 | Human coxsackievirus A11 strain Belgium-1, complete genome | 2381 | ____...c......... | 2393 | 70 |
| FJ859058.1 | Human poliovirus 1 isolate 10050, complete genome | 5039 | __..t..........__ | 5051 | 70 |
| FJ859059.1 | Human poliovirus 1 isolate 10086c, complete genome | 5039 | __..t..........__ | 5051 | 70 |
| FJ859060.1 | Human poliovirus 1 isolate 10091c, complete genome | 5039 | __..t..........__ | 5051 | 70 |
| FJ859061.1 | Human poliovirus 1 isolate 10092c, complete genome | 5039 | __..t..........__ | 5051 | 70 |
| FJ859062.1 | Human poliovirus 1 isolate 10094c, complete genome | 5039 | __..t..........__ | 5051 | 70 |
| FJ859063.1 | Human poliovirus 1 isolate 10095c, complete genome | 5039 | __..t..........__ | 5051 | 70 |
| FJ859064.1 | Human poliovirus 1 isolate 10097c, complete genome | 5039 | __..t..........__ | 5051 | 70 |
| AY302547.1 | Human echovirus 21 strain Farina complete genome | 3943 | ___..........t.._ | 3931 | 70 |
| AY875692.1 | Human coxsackievirus B5 isolate 2000/CSF/KOR, complete genome | 3920 | ___..........t.._ | 3908 | 70 |
| HM031191.1 | Human echovirus 25 strain HN-2, complete genome | 3945 | ___..........t.._ | 3933 | 70 |