../../tmp/servers/virsirnadb/1453275146
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1264 | 1 | ggaaaggacatgtctctat | 19 | |
| AF177911.1 | Coxsackievirus A16 polyprotein gene, complete cds | 4628 | ................... | 4646 | 100 |
| AY790926.1 | Human coxsackievirus A16 strain shzh00-1, complete genome | 4628 | ................... | 4646 | 100 |
| EU262658.1 | Human coxsackievirus A16 strain shzh05-1, complete genome | 4628 | ................... | 4646 | 100 |
| AY421768.1 | Human coxsackievirus A12 strain Texas-12, complete genome | 4622 | ..g................ | 4640 | 94 |
| GQ279368.1 | Human coxsackievirus A16 strain SZ/HK08-3, complete genome | 4628 | ..............a.... | 4646 | 94 |
| GQ279371.1 | Human coxsackievirus A16 strain SZ/HK08-7, complete genome | 4628 | ..............c.... | 4646 | 94 |
| AB575912.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 108 | 4578 | ..............a.... | 4596 | 94 |
| HQ269389.1 | Human coxsackievirus A16 isolate XM-CA16-3560, complete genome | 4629 | ..............c.... | 4647 | 94 |
| HQ423141.1 | Human coxsackievirus A16 strain KMM/08, complete genome | 4628 | ..............a.... | 4646 | 94 |
| GQ141875.1 | Human coxsackievirus B3 strain Beijing0811, complete genome | 4593 | .....a...g......... | 4611 | 89 |
| AY421761.1 | Human coxsackievirus A3 strain Olson, complete genome | 4613 | ..............c..g. | 4631 | 89 |
| AY421763.1 | Human coxsackievirus A5 strain Swartz, complete genome | 4618 | ..t............t... | 4636 | 89 |
| DQ341364.1 | Human enterovirus 71 isolate 5511-SIN-00, complete genome | 4630 | ..t...........a.... | 4648 | 89 |
| FJ172159.1 | Human enterovirus 71 isolate NUH0075/SIN/08, complete genome | 4588 | ..g...........g.... | 4606 | 89 |
| FJ198212.1 | Human coxsackievirus A16 strain GZ08, complete genome | 4628 | ..t............t... | 4646 | 89 |
| FJ461781.1 | Human enterovirus 71 isolate NUH0083/SIN/08, complete genome | 4594 | ..c...........a.... | 4612 | 89 |
| GQ994989.1 | Human enterovirus 71 strain Chongqing1-09-China, complete genome | 4626 | ..c.....t.......... | 4644 | 89 |
| GQ994992.1 | Human enterovirus 71 strain Henan2-09-China, complete genome | 4617 | ..c............t... | 4635 | 89 |
| AB575939.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 365 | 4558 | ..g...........a.... | 4576 | 89 |
| AB575941.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 248 | 4566 | ..g...........a.... | 4584 | 89 |
| AB575942.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 369 | 4561 | ..g...........a.... | 4579 | 89 |
| HQ456305.1 | Human enterovirus A strain GZ2010-156, complete genome | 4625 | ..t............t... | 4643 | 89 |
| AJ577594.1 | Human echovirus 11, isolate ROU-9191, complete virion genome | 4624 | .........g....g..c. | 4642 | 84 |
| AJ849942.1 | Human echovirus 3 gene for polyprotein, genomic RNA, strain PicoBank/ | 4619 | ..g.g....g......... | 4637 | 84 |
| EF634316.1 | Human echovirus 11 strain D207, complete genome | 4625 | .........g....g..c. | 4643 | 84 |
| AY421765.1 | Human coxsackievirus A7 strain Parker, complete genome | 4622 | ..g..a...........g. | 4640 | 84 |
| AY421766.1 | Human coxsackievirus A8 strain Donovan, complete genome | 4614 | ..g...........a..g. | 4632 | 84 |
| U22522.1 | ETU22522 Human enterovirus 71 polyprotein gene, complete cds | 4629 | ..c..........._____ | 4642 | 68 |
| FM955278.1 | Human coxsackievirus A17, complete genome, genomic RNA, isolate cCA17 | 6250 | ...c..ct.........__ | 6266 | 73 |
| FM955278.1 | Human coxsackievirus A17, complete genome, genomic RNA, isolate cCA17 | 2694 | ___..t..........___ | 2682 | 63 |
| AB426611.1 | Human enterovirus 97 genomic RNA, complete genome, strain: DT94-0227 | 870 | _..c..........a.a._ | 886 | 73 |
| AY421762.1 | Human coxsackievirus A4 strain High Point, complete genome | 4670 | ___..t.........t.._ | 4656 | 68 |
| AF499638.1 | Human coxsackievirus A15 strain G9, complete genome | 4053 | ______..........c.. | 4065 | 63 |
| AF465512.1 | Human coxsackievirus A15 strain G-9, complete genome | 4053 | ______..........c.. | 4065 | 63 |