../../tmp/servers/virsirnadb/657851357
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2047 | 1 | gggattttcgtcctctatc | 19 | |
| M21012.1 | HPDGEN Hepatitis delta virus RNA, complete genome | 1452 | ................... | 1470 | 100 |
| AJ000558.1 | Hepatitis D Virus complete genome | 1451 | ................... | 1469 | 100 |
| AF098261.1 | AF098261 Hepatitis D virus from Canada, complete genome | 1445 | ................... | 1463 | 100 |
| AJ307077.1 | Hepatitis delta virus complete genome, isolate W5 | 1452 | ................... | 1470 | 100 |
| HM046802.1 | Hepatitis delta virus isolate JN, complete genome | 1450 | ................... | 1468 | 100 |
| X04451.1 | Hepatitis delta virus (HDV) RNA genome | 1451 | ...............a... | 1469 | 94 |
| M55042.1 | HPDAG Hepatitis D virus delta antigen (HDAg) mRNA, complete cds | 1452 | ...............a... | 1470 | 94 |
| AM902175.1 | Hepatitis delta virus dFr2406 LHD gene for large HD antigen, genomic | 1454 | .................g. | 1472 | 94 |
| AM779593.1 | Hepatitis delta virus dTk13 LHD gene for large HD antigen, genomic RN | 1447 | ......k..........a. | 1465 | 89 |
| X85253.1 | Hepatitis D virus complete genome containing delta antigen ORF | 1449 | ......g..........a. | 1467 | 89 |
| AM779584.1 | Hepatitis delta virus dTk4 LHD gene for large HD antigen, genomic RNA | 1453 | ......g..........g. | 1471 | 89 |
| AM902181.1 | Hepatitis delta virus dFr2210 LHD gene for large HD antigen, genomic | 1453 | ...g.....t......... | 1471 | 89 |
| HQ005365.1 | Hepatitis delta virus isolate 7, complete genome | 1227 | .........t.......g. | 1245 | 89 |
| M58629.1 | HPDHDAGA Hepatitis delta virus large and small antigens (HDAg) gene, c | 1450 | .........t.......__ | 1466 | 84 |
| M58629.1 | HPDHDAGA Hepatitis delta virus large and small antigens (HDAg) gene, c | 834 | _...cg.........ct.. | 851 | 73 |
| X77627.1 | Hepatitis D virus genomic RNA for HDAg | 1447 | ...............a.__ | 1463 | 84 |
| X77627.1 | Hepatitis D virus genomic RNA for HDAg | 350 | ______.........____ | 342 | 47 |
| AF104263.1 | Hepatitis D virus strain TW2667, complete genome | 1449 | ...............a.__ | 1465 | 84 |
| AF425644.1 | Hepatitis D virus isolate TWD2577-66 genotype I, complete genome | 1447 | ...............a.__ | 1463 | 84 |
| AB118848.1 | Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N1) | 1451 | ...............a.__ | 1467 | 84 |
| AJ584846.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-73 | 1462 | ...............g.__ | 1478 | 84 |
| AY648958.1 | Hepatitis delta virus isolate TW1573#4, complete genome | 1447 | ...............a.__ | 1463 | 84 |
| AM183329.1 | Hepatitis delta virus complete virion genome, strain dFr2627 | 1451 | .........t.......__ | 1467 | 84 |
| AM183332.1 | Hepatitis delta virus complete virion genome, strain dFr2139 | 1446 | .........t.......__ | 1462 | 84 |
| AM779581.1 | Hepatitis delta virus dTk1 LHD gene for large HD antigen, genomic RNA | 1450 | ...............a.__ | 1466 | 84 |
| AM779585.1 | Hepatitis delta virus dTk6 LHD gene for large HD antigen, genomic RNA | 1454 | ...............a.__ | 1470 | 84 |
| AM779586.1 | Hepatitis delta virus dTk28 LHD gene for large HD antigen, genomic RN | 1451 | .........a.......__ | 1467 | 84 |
| AM779596.1 | Hepatitis delta virus dTk21 LHD gene for large HD antigen, genomic RN | 1454 | ...............a.__ | 1470 | 84 |
| AM779596.1 | Hepatitis delta virus dTk21 LHD gene for large HD antigen, genomic RN | 53 | _____.c.........___ | 43 | 52 |
| AM902169.1 | Hepatitis delta virus dFr2236 LHD gene for large HD antigen, genomic | 1455 | .........t.......__ | 1471 | 84 |
| AM902172.1 | Hepatitis delta virus dFr2264 LHD gene for large HD antigen, genomic | 1455 | ...............a.__ | 1471 | 84 |
| AM902172.1 | Hepatitis delta virus dFr2264 LHD gene for large HD antigen, genomic | 839 | _...cg.........ct.. | 856 | 73 |
| AM902177.1 | Hepatitis delta virus dFr2012 LHD gene for large HD antigen, genomic | 1454 | ...............a.__ | 1470 | 84 |
| AM183333.1 | Hepatitis delta virus complete virion genome, strain dFr2158 | 1444 | .....wg..........g. | 1462 | 84 |
| AM183333.1 | Hepatitis delta virus complete virion genome, strain dFr2158 | 840 | ______.........ct.. | 852 | 57 |
| L22066.1 | HPDAGA Hepatitis delta virus antigen gene, complete cds, and autocleav | 1454 | .........t.....a.g. | 1472 | 84 |
| AM902170.1 | Hepatitis delta virus dFr2244 LHD gene for large HD antigen, genomic | 1450 | .........t.....g.g. | 1468 | 84 |
| U81988.1 | HDU81988 Hepatitis delta virus from Somalia genotype IC, complete geno | 1447 | .........c.....a.__ | 1463 | 78 |
| AF104264.1 | Hepatitis D virus strain TW2476, complete genome | 1451 | .........a.....g.__ | 1467 | 78 |
| AF104264.1 | Hepatitis D virus strain TW2476, complete genome | 840 | .t..cg.........____ | 854 | 63 |
| AF425645.1 | Hepatitis D virus isolate TWD2476-38 genotype IIa, complete genome | 1448 | .........a.....g.__ | 1464 | 78 |
| AF425645.1 | Hepatitis D virus isolate TWD2476-38 genotype IIa, complete genome | 838 | _...cg.........____ | 851 | 63 |
| AY261457.1 | Hepatitis D virus isolate TW2479-12s, complete genome | 1446 | .........c.....g.__ | 1462 | 78 |
| AY261457.1 | Hepatitis D virus isolate TW2479-12s, complete genome | 837 | _...cg.........____ | 850 | 63 |
| AY261458.1 | Hepatitis D virus isolate TW2479-53, complete genome | 1390 | .........c.....a.__ | 1406 | 78 |
| AY261458.1 | Hepatitis D virus isolate TW2479-53, complete genome | 837 | _...cg.........____ | 850 | 63 |
| AY261459.1 | Hepatitis D virus isolate TW2479-13, complete genome | 1448 | .........c.....a.__ | 1464 | 78 |
| AY261459.1 | Hepatitis D virus isolate TW2479-13, complete genome | 837 | _...cg.........____ | 850 | 63 |
| AY261460.1 | Hepatitis D virus isolate TW2479-18, complete genome | 1447 | .........c.....a.__ | 1463 | 78 |
| AY261460.1 | Hepatitis D virus isolate TW2479-18, complete genome | 837 | _...cg.........____ | 850 | 63 |
| AB118849.1 | Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N2) | 1448 | .....a.........a.__ | 1464 | 78 |
| AJ584848.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-91 | 1464 | .........a.....g.__ | 1480 | 78 |
| AJ584849.1 | Hepatitis D virus mRNA for small HD antigen (sHD gene), strain dFr-64 | 1448 | .........a.....g.__ | 1464 | 78 |
| AY633627.1 | Hepatitis delta virus isolate IR-1, complete genome | 1448 | ..........a....a.__ | 1464 | 78 |
| AY648959.1 | Hepatitis delta virus isolate TW3678#25, complete genome | 1447 | .....g.........a.__ | 1463 | 78 |
| AM183327.1 | Hepatitis delta virus complete virion genome, strain dFr2736 | 1449 | .........a.....g.__ | 1465 | 78 |
| AM183328.1 | Hepatitis delta virus complete virion genome, strain dFr2703 | 1455 | .........a.....g.__ | 1471 | 78 |
| AM183328.1 | Hepatitis delta virus complete virion genome, strain dFr2703 | 848 | _____..........ct.. | 861 | 63 |
| AM779575.1 | Hepatitis delta virus dFr2119 LHD gene for large HD antigen, genomic | 1447 | .........t.....a.__ | 1463 | 78 |
| AM779575.1 | Hepatitis delta virus dFr2119 LHD gene for large HD antigen, genomic | 830 | _...cg.........ct.. | 847 | 73 |
| AM779576.1 | Hepatitis delta virus dFr2544 LHD gene for large HD antigen, genomic | 1447 | .........t.....g.__ | 1463 | 78 |
| AM779579.1 | Hepatitis delta virus dFr2395 LHD gene for large HD antigen, genomic | 1453 | .........a.....a.__ | 1469 | 78 |
| AM902163.1 | Hepatitis delta virus dFr2067 LHD gene for large HD antigen, genomic | 1454 | .........t.....a.__ | 1470 | 78 |
| AM902178.1 | Hepatitis delta virus dFr2040 LHD gene for large HD antigen, genomic | 1453 | .....kw..a.....g.__ | 1469 | 68 |
| AB118820.1 | Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M4) | 840 | _...cg.........ct.. | 857 | 73 |
| AB118832.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M17) | 841 | _...cg.........ct.. | 858 | 73 |
| AB118840.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M29) | 836 | _...cg.........ct.. | 853 | 73 |
| AJ584844.1 | Hepatitis D virus mRNA for small HD antigen (sHD gene), strain dFr-45 | 835 | _...cg.........ct.. | 852 | 73 |
| AM902166.1 | Hepatitis delta virus dFr2189 LHD gene for large HD antigen, genomic | 833 | _...cg.........ct.. | 850 | 73 |
| AM902174.1 | Hepatitis delta virus dFr2404 LHD gene for large HD antigen, genomic | 825 | _...cg.........ct.. | 842 | 73 |
| AB118846.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M37) | 838 | _...cg.........____ | 851 | 63 |
| HQ005367.1 | Hepatitis delta virus isolate 8, complete genome | 1510 | ____..c.........___ | 1499 | 57 |
| GU177114.1 | Hepatitis delta virus isolate HDV-DN79, complete genome | 112 | _____.c.........___ | 102 | 52 |
| U81989.1 | HDU81989 Hepatitis delta virus from Ethiopia genotype IC, complete gen | 1513 | __________......... | 1521 | 47 |
| AB037947.1 | Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8375 | 133 | __________......... | 125 | 47 |
| AB037948.1 | Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8349 | 133 | __________......... | 125 | 47 |
| AB037949.1 | Hepatitis D virus genomic RNA, complete genome, isolate:VnzD8624 | 133 | __________......... | 125 | 47 |