../../tmp/servers/virsirnadb/846494348
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1892 | 1 | ggtacaacatcatcaactt | 19 | |
| Z86099.2 | Herpes simplex virus type 2 (strain HG52), complete genome | 64658 | ................... | 64676 | 100 |
| Z86099.2 | Herpes simplex virus type 2 (strain HG52), complete genome | 90886 | __............c.___ | 90899 | 68 |
| NC_001798.1 | Human herpesvirus 2, complete genome | 64658 | ................... | 64676 | 100 |
| NC_001798.1 | Human herpesvirus 2, complete genome | 90886 | __............c.___ | 90899 | 68 |
| GU734771.1 | Human herpesvirus 1 strain F, complete genome | 64115 | ................... | 64133 | 100 |
| GU734771.1 | Human herpesvirus 1 strain F, complete genome | 90210 | _.............c.___ | 90224 | 73 |
| GU734772.1 | Human herpesvirus 1 strain H129, complete genome | 64146 | ................... | 64164 | 100 |
| GU734772.1 | Human herpesvirus 1 strain H129, complete genome | 90250 | _.............c.___ | 90264 | 73 |
| NC_001806.1 | Human herpesvirus 1, complete genome | 64197 | ................... | 64215 | 100 |
| NC_001806.1 | Human herpesvirus 1, complete genome | 90315 | _.............c.___ | 90329 | 73 |
| U43400.1 | HHU43400 Human herpesvirus-7 (HHV7) JI, complete virion genome | 53323 | .a..............t.. | 53305 | 89 |
| U43400.1 | HHU43400 Human herpesvirus-7 (HHV7) JI, complete virion genome | 92922 | _...t.........c.g._ | 92906 | 73 |
| U43400.1 | HHU43400 Human herpesvirus-7 (HHV7) JI, complete virion genome | 121773 | __.........c...tt.. | 121789 | 73 |
| NC_001716.2 | Human herpesvirus 7, complete genome | 57544 | .a...........a..t.. | 57526 | 84 |
| NC_001716.2 | Human herpesvirus 7, complete genome | 97152 | _...t.........c.g._ | 97136 | 73 |
| NC_001716.2 | Human herpesvirus 7, complete genome | 125999 | __.........c...tt.. | 126015 | 73 |
| NC_007605.1 | Human herpesvirus 4 type 1, complete genome | 82953 | __.t...t........... | 82937 | 78 |
| NC_007605.1 | Human herpesvirus 4 type 1, complete genome | 162072 | _.a..t...........__ | 162057 | 73 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 82791 | __.t...t........... | 82775 | 78 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 82963 | __.t...t........... | 82947 | 78 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 163556 | _.a..t...........__ | 163541 | 73 |
| NC_000898.1 | Human herpesvirus 6B, complete genome | 27839 | _.a.g...........t.. | 27856 | 78 |
| AB021506.1 | Human herpesvirus 6B DNA, complete genome, strain: HST | 27681 | _.a.g...........t.. | 27698 | 78 |
| NC_001664.2 | Human herpesvirus 6A, complete genome | 26768 | _.a.g...........t.. | 26785 | 78 |
| HQ380895.1 | Human herpesvirus 5 strain JHC, complete genome | 3295 | ___............t.__ | 3282 | 68 |
| HQ380895.1 | Human herpesvirus 5 strain JHC, complete genome | 80471 | .t..........a.tc... | 80453 | 78 |
| NC_006273.2 | Human herpesvirus 5, complete genome | 3422 | ___............t.__ | 3409 | 68 |
| GQ994935.1 | Human herpesvirus 8 clone 219BAC, complete genome | 12470 | ..........agca..... | 12488 | 78 |
| GQ994935.1 | Human herpesvirus 8 clone 219BAC, complete genome | 81557 | ..g.a.........c.g.. | 81575 | 78 |
| NC_009333.1 | Human herpesvirus 8, complete genome | 12455 | ..........agca..... | 12473 | 78 |
| NC_009333.1 | Human herpesvirus 8, complete genome | 81840 | ..g.a.........c.g.. | 81858 | 78 |