../../tmp/servers/virsirnadb/1842390164
Result for your query siRNA sequence
RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numberStrain nameStartAlignmentEnd% Identity
Queryvirsi20621ggtggatgttgtagacatg19
NC_004280.1 Mammalian orthoreovirus 3 segment M1, complete sequence 895...................913100
AF461683.1 Mammalian orthoreovirus 3 strain Dearing minor core protein mu-2 (M1)895...................913100
AF461684.1 Mammalian orthoreovirus 3 strain Dearing minor core protein mu-2 (M1)895...................913100
AY428878.1 Mammalian orthoreovirus 3 strain tsC447 minor core protein mu2 gene, 895...................913100
AY551083.1 Mammalian orthoreovirus 3 minor core protein mu2 (M1) mRNA, complete 895...................913100
EF494438.1 Mammalian orthoreovirus 3 strain T3D segment M1, complete sequence 895...................913100
HM159616.1 Mammalian orthoreovirus 3 Dearing strain T3D segment M1, complete seq895...................913100
GU991662.1 Mammalian orthoreovirus 3 isolate R124 segment M1, complete sequence 895...................913100
GU991672.1 Mammalian orthoreovirus 3 isolate Q2R segment M1, complete sequence 895...................913100
NC_004280.1 Mammalian orthoreovirus 3 segment M1, complete sequence 895...................913100
X59945.1 Reovirus type 1 Lang gene for mu2 protein, genomic RNA 895................g..91394
AY428870.1 Mammalian orthoreovirus 1 clone 11 minor core protein mu2 gene, compl895................g..91394
AY428871.1 Mammalian orthoreovirus 1 clone 29 minor core protein mu2 gene, compl895................g..91394
AY428873.1 Mammalian orthoreovirus 2 strain Netherlands 84 minor core protein mu895................g..91394
AY428874.1 Mammalian orthoreovirus 2 strain SV59 minor core protein mu2 gene, co895................g..91394
AY428875.1 Mammalian orthoreovirus 3 clone 18 minor core protein mu2 gene, compl895................g..91394
AY428876.1 Mammalian orthoreovirus 3 clone 44 minor core protein mu2 gene, compl895................g..91394
AY428877.1 Mammalian orthoreovirus 3 strain Netherlands 83 minor core protein mu895................g..91394
HQ642772.1 Mammalian orthoreovirus strain MRV-HLJ/2007 mu-2 protein gene, comple895...a............g..91389
GU196309.1 Mammalian orthoreovirus 2 segment M1 u2 protein gene, complete cds 882......c.........g..90089
GU196309.1 Mammalian orthoreovirus 2 segment M1 u2 protein gene, complete cds 912.........g.cc..____92663
GU589580.1 Mammalian orthoreovirus 3 strain Abney segment M1, complete sequence 896_..a............g..91384
DQ396804.2 Mammalian orthoreovirus strain SC-A segment M1 mu-2 protein gene, com895.a.a............g..91384
NC_013227.1 Mammalian orthoreovirus 3 segment M1, complete genome 895.........c...a..g._91278
NC_013227.1 Mammalian orthoreovirus 3 segment M1, complete genome 925.........g.cc..____93963
DQ664187.1 Mammalian orthoreovirus 2 isolate BYD1 segment M1, complete sequence 895.........c..g..tg..91378
DQ664187.1 Mammalian orthoreovirus 2 isolate BYD1 segment M1, complete sequence 925.........g.cc..____93963
NC_004275.1 Mammalian orthoreovirus 3 segment L2, complete sequence 2586_..........g.______259757
NC_013225.1 Mammalian orthoreovirus 3 segment L1, complete genome 131________.........._12252
NC_004282.4 Mammalian orthoreovirus 3 segment L1, complete sequence 155________.........._14652
NC_004274.1 Mammalian orthoreovirus 3 segment L3, complete sequence 1354.........ct.c..g.__137068
M23747.1REOMCPL1A Reovirus type 3 major core protein lambda-1 from L3 genome s1354.........ct.c..g.__137068
DQ664186.1 Mammalian orthoreovirus 2 isolate BYD1 segment L3, complete sequence 1354.........ct.c..g.__137068
EF029088.1 Mammalian orthoreovirus isolate SC-A segment L3, complete sequence 1354.........at.c..g.__137068
EF494437.1 Mammalian orthoreovirus 3 strain T3D segment L3, complete sequence 1354.........ct.c..g.__137068
GU196308.1 Mammalian orthoreovirus 2 segment L3 lambda-1 protein gene, complete 1352.........at.c..g.__136868
GU589579.1 Mammalian orthoreovirus 3 strain Abney segment L3, complete sequence 1354.........ct.c..g.__137068
HM159615.1 Mammalian orthoreovirus 3 Dearing strain T3D segment L3, complete seq1354.........ct.c..g.__137068
GU991661.1 Mammalian orthoreovirus 3 isolate R124 segment L3, complete sequence 1354.........ct.c..g.__137068
GU991671.1 Mammalian orthoreovirus 3 isolate Q2R segment L3, complete sequence 1354.........ct.c..g.__137068
NC_004274.1 Mammalian orthoreovirus 3 segment L3, complete sequence 1354.........ct.c..g.__137068
NC_004281.1 Mammalian orthoreovirus 3 segment M3, complete sequence 619_.........tct...___63363
NC_004281.1 Mammalian orthoreovirus 3 segment M3, complete sequence 619_.........tct...___63363
DQ220020.1 Reovirus sp. T2W segment S2 core nodule protein gene, complete cds 968__.........________96047