../../tmp/servers/virsirnadb/1567784811
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1749 | 1 | gtacaaagcacacacgtag | 19 | |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 766 | ................... | 784 | 100 |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 3915 | ____.........._____ | 3906 | 52 |
| NC_001355.1 | Human papillomavirus type 6b, complete genome | 4418 | _.........t....____ | 4405 | 68 |
| NC_001694.1 | Human papillomavirus - 61, complete genome | 3125 | ............g._____ | 3138 | 68 |
| NC_001694.1 | Human papillomavirus - 61, complete genome | 86 | ___..........t.a.__ | 99 | 63 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 5133 | __...tta........... | 5149 | 73 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 2418 | ___.........t.g.___ | 2406 | 57 |
| NC_001596.1 | Human papillomavirus type 9, complete genome | 5191 | __....tc.g......... | 5207 | 73 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 4410 | ___...t.t........._ | 4396 | 68 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 305 | _____.........t..._ | 293 | 63 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 1974 | ...........________ | 1984 | 57 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 1966 | ___.t.........g.___ | 1954 | 57 |
| NC_014953.1 | Human papillomavirus type 129, complete genome | 272 | __...g.........____ | 260 | 63 |
| NC_014953.1 | Human papillomavirus type 129, complete genome | 652 | ...gc........._____ | 639 | 63 |
| NC_001591.1 | Human papillomavirus type 49, complete genome | 5877 | ...........________ | 5887 | 57 |
| NC_004765.1 | Felis domesticus papillomavirus type 1, complete genome | 7612 | ..........gg..gc.._ | 7629 | 73 |
| NC_008582.1 | Old World harvest mouse papillomavirus, complete genome | 7272 | _.g.c.........g..__ | 7287 | 68 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 795 | .c.t..........g.___ | 780 | 68 |
| NC_010739.1 | Ursus maritimus papillomavirus 1, complete genome | 216 | .c...gt.........___ | 201 | 68 |
| NC_001619.1 | Canine oral papillomavirus, complete genome | 1050 | .........c.g.._____ | 1063 | 63 |
| NC_014956.1 | Human papillomavirus type 134, complete genome | 2866 | .c..........g._____ | 2879 | 63 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 5773 | ____..........a.a._ | 5786 | 63 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 4072 | __..........a.t.___ | 4059 | 63 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 2906 | .........._________ | 2915 | 52 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 4036 | _____..........____ | 4027 | 52 |
| NC_001605.1 | Mastomys natalensis papillomavirus, complete genome | 5291 | _______.........c.. | 5302 | 57 |
| NC_008032.1 | Capra hircus papillomavirus type 1, complete genome | 602 | ______..t........._ | 591 | 57 |
| NC_010817.1 | Bandicoot papillomatosis carcinomatosis virus type 2, complete genome | 3493 | .........c.._______ | 3482 | 57 |
| NC_012123.1 | Equine papillomavirus 2, complete genome | 4080 | ..........a._______ | 4069 | 57 |
| NC_012123.1 | Equine papillomavirus 2, complete genome | 586 | .c.........g.______ | 574 | 57 |
| NC_012123.1 | Equine papillomavirus 2, complete genome | 608 | ___..tc.........___ | 596 | 57 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 114 | __.........g.._____ | 103 | 57 |
| NC_006951.1 | Erethizon dorsatum papillomavirus type 1, complete genome | 1454 | ___.c..........____ | 1465 | 57 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 3964 | ___.........a..____ | 3953 | 57 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 2250 | ___.........att..._ | 2264 | 63 |
| NC_001587.1 | Human papillomavirus type 34, complete genome | 756 | ____.g..........___ | 767 | 57 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 7485 | _______.g.......... | 7474 | 57 |
| NC_001524.1 | European elk papillomavirus, complete genome | 5123 | _____..........____ | 5132 | 52 |
| NC_003973.1 | Psittacus erithacus timneh papillomavirus, complete genome | 3419 | __.........._______ | 3410 | 52 |
| NC_008297.1 | Canine papillomavirus 3, complete genome | 4903 | _________.......... | 4894 | 52 |
| NC_008298.1 | Rousettus aegyptiacus papillomavirus type 1, complete genome | 5439 | ____.........._____ | 5448 | 52 |
| NC_014143.1 | Bettongia penicillata papillomavirus 1, complete genome | 5003 | _________.......... | 4994 | 52 |
| NC_003748.1 | Equus caballus papillomavirus - 1, complete genome | 7162 | __.........ct..c.c. | 7146 | 68 |
| NC_004194.1 | Equinus papillomavirus, complete genome | 7141 | __.........ct..c.c. | 7125 | 68 |
| NC_014954.1 | Human papillomavirus type 131, complete genome | 4345 | ____.........ct..__ | 4357 | 57 |
| NC_014326.1 | Mus musculus papillomavirus type 1, complete genome | 5481 | _____.t.........g._ | 5493 | 57 |