../../tmp/servers/virsirnadb/1519858908
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2162 | 1 | gtggttggactctttctaa | 19 | |
| D00627.1 | CXA9CG Human coxsackievirus A9 genomic RNA, complete genome, strain: G | 7331 | ................... | 7349 | 100 |
| U57056.1 | CXU57056 Coxsackievirus B3 Woodruff variant, complete genome | 7282 | ................... | 7300 | 100 |
| AF114383.1 | Coxsackievirus B5 strain Faulkner, complete genome | 7282 | ................... | 7300 | 100 |
| AY302541.1 | Human echovirus 15 strain CH 96-51 complete genome | 7319 | ................... | 7337 | 100 |
| AY302547.1 | Human echovirus 21 strain Farina complete genome | 7308 | ................... | 7326 | 100 |
| AY302548.1 | Human echovirus 24 strain DeCamp complete genome | 7315 | ................... | 7333 | 100 |
| AY302544.1 | Human echovirus 19 strain Burke complete genome | 7316 | _.................. | 7333 | 94 |
| AY302552.1 | Human echovirus 29 strain JV-10 complete genome | 7310 | _.................. | 7327 | 94 |
| X80059.1 | Echo Virus 11 genomic DNA | 7321 | ...............t... | 7339 | 94 |
| X84981.1 | Echovirus 9 (strain Hill), complete genome | 7303 | ............c...... | 7321 | 94 |
| AF085363.1 | Coxsackievirus B2 strain Ohio-1 polyprotein gene, complete cds | 7288 | ...............t... | 7306 | 94 |
| AF081485.1 | Coxsackievirus B2 strain Ohio, complete genome | 7288 | ...............t... | 7306 | 94 |
| AF029859.2 | Echovirus 1 (strain Farouk / ATCC VR-1038) polyprotein precursor, gen | 7280 | ............c...... | 7298 | 94 |
| AY036579.1 | Human echovirus 7 strain Wallace polyprotein gene, complete cds | 7309 | ...............t... | 7327 | 94 |
| AF317694.1 | Human echovirus 18 strain Metcalf polyprotein gene, complete cds | 7292 | ............c...... | 7310 | 94 |
| AF328683.1 | Human coxsackievirus B4 polyprotein-like gene, complete sequence | 7274 | ............c...... | 7292 | 94 |
| AY186745.1 | Human coxsackievirus B1 clone pMP1.24 polyprotein gene, complete cds | 7253 | ...............t... | 7271 | 94 |
| AY186746.1 | Human coxsackievirus B1 clone pMP1.23 polyprotein gene, complete cds | 7253 | ...............t... | 7271 | 94 |
| AY186747.1 | Human coxsackievirus B1 clone pAMP2.17 polyprotein gene, complete cds | 7253 | ...............t... | 7271 | 94 |
| AY186748.1 | Human coxsackievirus B1 clone pAMP2.22 polyprotein gene, complete cds | 7253 | ...............t... | 7271 | 94 |
| AF465516.1 | Human echovirus 7 strain Wallace, complete genome | 7309 | ...............t... | 7327 | 94 |
| AY302553.1 | Human echovirus 3 strain Morrisey complete genome | 7310 | ......a............ | 7328 | 94 |
| AY302557.1 | Human echovirus 4 strain Pesacek complete genome | 7276 | ............c...... | 7294 | 94 |
| AY302559.1 | Human echovirus 7 strain Wallace complete genome | 7309 | ...............t... | 7327 | 94 |
| AY843298.1 | Human enterovirus 80 strain USA/CA67-10387, complete genome | 7310 | ............c...... | 7328 | 94 |
| AY843299.1 | Human enterovirus 81 strain USA/CA68-10389, complete genome | 7297 | ............c...... | 7315 | 94 |
| AY843301.1 | Human enterovirus 83 strain USA/CA76-10392, complete genome | 7276 | ............c...... | 7294 | 94 |
| EU147493.1 | Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds | 7275 | ...............t... | 7293 | 94 |
| AF083069.1 | Echovirus 5, complete genome | 7316 | _................g. | 7333 | 89 |
| AF241359.1 | Enterovirus CA55-1988, complete genome | 7294 | _..............t... | 7311 | 89 |
| AF524867.1 | Human echovirus 9 isolate DM, complete genome | 7337 | _..............t... | 7354 | 89 |
| AF465518.1 | Human echovirus 2 strain Cornelis, complete genome | 7318 | _..............t... | 7335 | 89 |
| AY302543.1 | Human echovirus 17 strain CHHE-29 complete genome | 7299 | _..............t... | 7316 | 89 |
| AY302545.1 | Human echovirus 2 strain Cornelis complete genome | 7318 | _..............t... | 7335 | 89 |
| AY302546.1 | Human echovirus 20 strain JV-1 complete genome | 7277 | _...........c...... | 7294 | 89 |
| AY302555.1 | Human echovirus 32 strain PR-10 complete genome | 7303 | _..............t... | 7320 | 89 |
| AY302556.1 | Human echovirus 33 strain Toluca-3 complete genome | 7277 | _...........c...... | 7294 | 89 |
| AY302560.1 | Enterovirus 69 strain Toluca-1 complete genome | 7294 | _...........c...... | 7311 | 89 |
| AY673831.1 | Human coxsackievirus B3 strain GA, complete genome | 7284 | _........t......... | 7301 | 89 |
| AY843297.1 | Human enterovirus 79 strain USA/CA79-10384, complete genome | 7313 | _...........c...... | 7330 | 89 |
| AY843300.1 | Human enterovirus 82 strain USA/CA64-10390, complete genome | 7316 | _...........c...... | 7333 | 89 |
| X54521.1 | Swine vesicular disease virus complete genomic RNA | 7282 | ............c..t... | 7300 | 89 |
| D16364.1 | SVDMPS Swine vesicular disease virus gene for polyprotein, complete cd | 7283 | ............c..t... | 7301 | 89 |
| U16283.1 | E6U16283 Echovirus 6 lytic strain, complete genome | 7299 | ......a..t......... | 7317 | 89 |
| D00435.1 | SVDG Swine vesicular disease virus (STRAIN H/3 '76) genomic RNA, compl | 7283 | ............c..t... | 7301 | 89 |
| AF039205.1 | Coxsackievirus B6 strain Schmitt, complete genome | 7280 | .........t..c...... | 7298 | 89 |
| AF105342.1 | Coxsackievirus B6 strain Schmitt, complete genome | 7280 | .........t..c...... | 7298 | 89 |
| AF114384.1 | Coxsackievirus B6 strain Schmitt, complete genome | 7279 | .........t..c...... | 7297 | 89 |
| AF465517.1 | Human echovirus 6 strain Charles, complete genome | 7300 | ......a..t......... | 7318 | 89 |
| AY302551.1 | Human echovirus 27 strain Bacon complete genome | 7293 | ............c..t... | 7311 | 89 |
| AY302558.1 | Human echovirus 6 strain D'Amori complete genome | 7300 | ......a..t......... | 7318 | 89 |
| AY556057.1 | Enterovirus 74 strain USA/CA75-10213, complete genome | 7291 | ....c..........t... | 7309 | 89 |
| DQ534205.1 | Human echovirus 30 isolate 14916net87, complete genome | 7311 | ............c..t... | 7329 | 89 |
| EF174468.1 | Human coxsackievirus B2 isolate KOR 04-243, complete genome | 7288 | .........t..c...... | 7306 | 89 |
| EF634316.1 | Human echovirus 11 strain D207, complete genome | 7315 | .........t..c...... | 7333 | 89 |
| EU887278.1 | Swine vesicular disease virus SVDV01, complete genome | 7283 | ............c..t... | 7301 | 89 |
| EU887279.1 | Swine vesicular disease virus SVDV02, complete genome | 7283 | ............c..t... | 7301 | 89 |
| EU887280.1 | Swine vesicular disease virus SVDV03, complete genome | 7283 | ............c..t... | 7301 | 89 |
| HM775882.1 | Human echovirus 5 isolate Kor06-ECV5-253cn, complete genome | 7311 | ............c..t... | 7329 | 89 |
| HM777023.1 | Human echovirus 18 isolate Kor05-ECV18-054cn, complete genome | 7295 | ............c..t... | 7313 | 89 |
| AF230973.1 | AF230973 Enterovirus Yanbian 96-83csf, complete genome | 7290 | _..............t.._ | 7306 | 84 |
| AY896762.1 | Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein | 7263 | _...c............._ | 7279 | 84 |
| M33854.1 | CXA3CG Coxsackievirus B3 (CVB3) complete genome | 7281 | ............c..t.._ | 7298 | 84 |
| M16572.1 | CXA3G Coxsackievirus B3, complete genome | 7280 | ............c..t.._ | 7297 | 84 |
| M88483.1 | CXAB3CG Coxsackievirus B3 mRNA, complete genome | 7282 | ............c..t.._ | 7299 | 84 |
| X92886.1 | Echovirus 9 (strain Barty), complete genome | 7335 | _...........c..t... | 7352 | 84 |
| AF231763.1 | Coxsackievirus B3 strain 31-1-93, complete genome | 7282 | ............c..t.._ | 7299 | 84 |
| AF231764.1 | Coxsackievirus B3 strain P, complete genome | 7282 | ............c..t.._ | 7299 | 84 |
| AF231765.1 | Coxsackievirus B3 strain PD, complete genome | 7282 | ............c..t.._ | 7299 | 84 |
| AF524866.1 | Human echovirus 9 strain Barty, complete genome | 7337 | _...........c..t... | 7354 | 84 |
| AY302539.1 | Human echovirus 13 strain Del Carmen complete genome | 7292 | _...........c..t... | 7309 | 84 |
| AY752945.1 | Human coxsackievirus B3 strain 0, complete genome | 7282 | ............c..t.._ | 7299 | 84 |
| AY752946.1 | Human coxsackievirus B3 strain 20, complete genome | 7282 | ............c..t.._ | 7299 | 84 |
| AY875692.1 | Human coxsackievirus B5 isolate 2000/CSF/KOR, complete genome | 7286 | _.........g.c...... | 7303 | 84 |
| AY843308.1 | Human enterovirus 101 strain CIV03-10361, complete genome | 7327 | ............c..t.._ | 7344 | 84 |
| FJ000001.1 | Human coxsackievirus B3 strain Fuyang19, complete genome | 7282 | _...c..........t... | 7299 | 84 |
| AY752944.2 | Human coxsackievirus B3 strain 28, complete genome | 7282 | ............c..t.._ | 7299 | 84 |
| AJ849942.1 | Human echovirus 3 gene for polyprotein, genomic RNA, strain PicoBank/ | 7309 | ............c..t.g. | 7327 | 84 |
| DQ246620.1 | Human echovirus 30 strain Echo30/Zhejiang/17/03/CSF, complete genome | 7310 | .........t..c..t... | 7328 | 84 |
| X67706.1 | Coxsackievirus B5 complete genome | 7284 | _...........c..t.._ | 7300 | 78 |
| EF667343.1 | Simian enterovirus 46 strain RNM5, complete genome | 7277 | _...c.t..a......... | 7294 | 78 |
| EF667344.1 | Human enterovirus 92 strain RJG7, complete genome | 7261 | _...c.t..a......... | 7278 | 78 |
| AY036578.1 | Human echovirus 7 strain UMMC polyprotein gene, complete cds | 7308 | .........t..c..t.g. | 7326 | 78 |
| AY843302.1 | Human enterovirus 77 strain USA/TX97-10394, complete genome | 7304 | .........t..c..t.g. | 7322 | 78 |
| EF555645.1 | Human enterovirus 102, complete genome | 2190 | .........gg....____ | 2176 | 68 |
| AY421763.1 | Human coxsackievirus A5 strain Swartz, complete genome | 1175 | ____..t..........__ | 1163 | 63 |
| FJ914252.2 | Human poliovirus 3 strain SWI10947, complete genome | 1180 | ____...........____ | 1170 | 57 |