../../tmp/servers/virsirnadb/2051617980
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2352 | 1 | taacctgtgtatattgcaa | 19 | |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 193 | ................... | 211 | 100 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 4046 | _____...........___ | 4056 | 57 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 184 | _____.............. | 197 | 73 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 4094 | _____..........____ | 4103 | 52 |
| NC_001356.1 | Human papillomavirus - 1, complete genome | 85 | .t..........t..____ | 71 | 68 |
| NC_001356.1 | Human papillomavirus - 1, complete genome | 1474 | _____..........____ | 1483 | 52 |
| NC_001524.1 | European elk papillomavirus, complete genome | 5353 | __...........g.____ | 5341 | 63 |
| NC_001524.1 | European elk papillomavirus, complete genome | 4015 | ...ata..........___ | 4030 | 68 |
| NC_001524.1 | European elk papillomavirus, complete genome | 6688 | ___...t.ag......... | 6703 | 68 |
| NC_010329.1 | Human papillomavirus type 88, complete genome | 1374 | ____.........a...__ | 1386 | 63 |
| NC_009752.1 | Bovine papillomavirus 8, complete genome | 4826 | _.........g..a.a.__ | 4811 | 68 |
| NC_011531.1 | Chelonia mydas papillomavirus 1, complete genome | 2544 | _...ag.........a.__ | 2559 | 68 |
| NC_004197.1 | Bovine papillomavirus 3, complete genome | 6489 | __.a.........g..g._ | 6504 | 68 |
| NC_003348.1 | Phocoena spinipinnis papillomavirus, complete genome | 6944 | ___.t..........tt.. | 6929 | 68 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 5128 | _.........g..g.____ | 5115 | 63 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 1517 | _____..........____ | 1526 | 52 |
| NC_014955.1 | Human papillomavirus type 132, complete genome | 2324 | _.t..........a.____ | 2337 | 63 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 399 | .c.g.........._____ | 386 | 63 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 3307 | ___.t.........g.___ | 3319 | 57 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 1589 | .t..a........._____ | 1576 | 63 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 1189 | ____.........aa..__ | 1177 | 57 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 5218 | ___.........t..____ | 5207 | 57 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 3889 | .g.........._______ | 3900 | 57 |
| NC_014185.1 | Human papillomavirus 121, complete genome | 2399 | _.t..........______ | 2410 | 57 |
| NC_001541.1 | Cottontail rabbit papillomavirus, complete genome | 3017 | __.........._______ | 3026 | 52 |
| NC_008188.1 | Human papillomavirus type 103, complete genome | 6099 | _________.......... | 6108 | 52 |
| NC_011765.1 | Erinaceus europaeus papillomavirus, complete genome | 1863 | _________.......... | 1872 | 52 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 721 | _________.......... | 712 | 52 |
| NC_013236.1 | Canine papillomavirus 5, complete genome | 3357 | ________.........._ | 3348 | 52 |
| NC_004765.1 | Felis domesticus papillomavirus type 1, complete genome | 801 | .g.........a.______ | 813 | 57 |
| NC_004104.1 | Human papillomavirus type 90, complete genome | 4257 | ..ca.........______ | 4245 | 57 |