../../tmp/servers/virsirnadb/1047256916
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1732 | 1 | tgtgtgtactgcaagcaac | 19 | |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 191 | ................... | 209 | 100 |
| NC_010739.1 | Ursus maritimus papillomavirus 1, complete genome | 106 | ...............a.._ | 123 | 89 |
| NC_001690.1 | Human papillomavirus type 48, complete genome | 329 | ...c.........._____ | 342 | 68 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 2422 | ____............___ | 2411 | 63 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 4681 | ____.........c..g.. | 4667 | 68 |
| NC_014952.1 | Human papillomavirus type 128, complete genome | 6287 | ____.a..........g._ | 6300 | 63 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 7269 | _..t.t..........___ | 7283 | 68 |
| NC_001586.1 | Human papillomavirus type 32, complete genome | 1436 | _________.......... | 1445 | 52 |
| NC_001691.1 | Human papillomavirus type 50, complete genome | 135 | ______..t.......... | 147 | 63 |
| NC_004195.1 | Bovine papillomavirus type 5, complete genome | 55 | ____..c..........__ | 43 | 63 |
| NC_004195.1 | Bovine papillomavirus type 5, complete genome | 4178 | __.........._______ | 4169 | 52 |
| NC_006564.1 | Canine papillomavirus 2, complete genome | 2586 | ____...........a.__ | 2598 | 63 |
| NC_006564.1 | Canine papillomavirus 2, complete genome | 5703 | .........c..t._____ | 5690 | 63 |
| NC_013117.1 | Francolinus leucoscepus papillomavirus 1, complete genome | 6304 | ____.........g...__ | 6316 | 63 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 7445 | _...........c._____ | 7457 | 63 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 856 | ...a..cgta......... | 874 | 73 |
| NC_015325.1 | Zalophus californianus papillomavirus 1, complete genome | 584 | ..c.g.........a.___ | 599 | 68 |
| NC_001356.1 | Human papillomavirus - 1, complete genome | 3235 | _.a..........g.____ | 3222 | 63 |
| NC_008032.1 | Capra hircus papillomavirus type 1, complete genome | 594 | _.........a.t..____ | 607 | 63 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 1434 | __...ac.........___ | 1447 | 63 |
| NC_001605.1 | Mastomys natalensis papillomavirus, complete genome | 1271 | _______..a......... | 1260 | 57 |
| NC_002232.1 | Rabbit oral papillomavirus, complete genome | 617 | ______.t.........._ | 606 | 57 |
| NC_002232.1 | Rabbit oral papillomavirus, complete genome | 2193 | ________.........._ | 2184 | 52 |
| NC_004104.1 | Human papillomavirus type 90, complete genome | 1440 | _.c..........______ | 1451 | 57 |
| NC_001587.1 | Human papillomavirus type 34, complete genome | 3895 | _______.........g.. | 3884 | 57 |
| NC_001587.1 | Human papillomavirus type 34, complete genome | 83 | ___..........______ | 74 | 52 |
| NC_015268.1 | Camelus dromedarius papillomavirus type 2, complete genome | 5684 | _..........a.______ | 5695 | 57 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 3965 | ___.g..........____ | 3954 | 57 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 5222 | __.........t.._____ | 5211 | 57 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 220 | _____.a.g........._ | 232 | 57 |
| NC_001693.1 | Human papillomavirus type 60, complete genome | 4027 | _____..........____ | 4036 | 52 |
| NC_011765.1 | Erinaceus europaeus papillomavirus, complete genome | 2604 | _______..........__ | 2613 | 52 |
| NC_012213.1 | Human papillomavirus type 108, complete genome | 639 | .........._________ | 648 | 52 |
| NC_007150.1 | Procyon lotor papillomavirus 1, complete genome | 2945 | __.........._______ | 2936 | 52 |
| NC_014835.1 | Human papillomavirus type 148, complete genome | 1775 | ____.........._____ | 1766 | 52 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 4070 | .........._________ | 4079 | 52 |
| NC_011531.1 | Chelonia mydas papillomavirus 1, complete genome | 1696 | _..ac.c.g........._ | 1680 | 68 |
| NC_008297.1 | Canine papillomavirus 3, complete genome | 4273 | ____..c.aa......... | 4287 | 63 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 2031 | ____.a..ag......... | 2045 | 63 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 600 | ____.........g.g.g. | 614 | 63 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 7654 | _____..ta........._ | 7642 | 57 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 2975 | _____.a.a........._ | 2987 | 57 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 2508 | ______.........tt.. | 2520 | 57 |