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- Family of Virus
- Virus Name
- Gene Name
- Pubmed Id
- VsiRNAid
Total number of Results for E2 are 7
Results from 0 - 25
siRNA sequence "cugguucggcuguacaugg" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "cugguucggcuguacaugg" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1399 " record
Length: 21
GC Content:52 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:52 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "cugguucggcuguacaugg" siRNA in Human Genome sequences
See AY587299 at Genbank
Pubmed:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
siRNA sequence "uccagcuugugaauaccaa" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "uccagcuugugaauaccaa" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1402 " record
Length: 21
GC Content:38 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:38 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "uccagcuugugaauaccaa" siRNA in Human Genome sequences
See AY587299 at Genbank
Pubmed:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
siRNA sequence "cauuguggacgugcaguac" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "cauuguggacgugcaguac" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1179 " record
Length: 19
GC Content:53 %
Starting position: 2426
Strain of Virus: Genotype 1a
Incubation Time (Hours):72
Length: 19
GC Content:53 %
Starting position: 2426
Strain of Virus: Genotype 1a
Incubation Time (Hours):72
Offtargets for "cauuguggacgugcaguac" siRNA in Human Genome sequences
Pubmed:15977238
Article:Small interfering RNA effectively inhibits protein expression and negative strand RNA synthesis from a full-length hepatitis C virus clone.
Authors:Prabhu R, Vittal P, Yin Q, Flemington E, Garry R, Robichaux WH, Dash S.
Journal:J Med Virol. 2005 Aug;76(4):511-9.
Entrez:15977238
Article:Small interfering RNA effectively inhibits protein expression and negative strand RNA synthesis from a full-length hepatitis C virus clone.
Authors:Prabhu R, Vittal P, Yin Q, Flemington E, Garry R, Robichaux WH, Dash S.
Journal:J Med Virol. 2005 Aug;76(4):511-9.
Entrez:15977238
siRNA sequence "aaggcacaugguaucgacccu" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "aaggcacaugguaucgacccu" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi2136 " record
Length: 21
GC Content:52 %
Starting position: 7284
Strain of Virus: Isolate Con1
GenBank Acc: AJ238799
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 21
GC Content:52 %
Starting position: 7284
Strain of Virus: Isolate Con1
GenBank Acc: AJ238799
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "aaggcacaugguaucgacccu" siRNA in Human Genome sequences
See AJ238799 at Genbank
Pubmed:16979254
Article:Inhibition of hepatitis C virus gene expression by small interfering RNAs using a tri-cistronic full-length viral replicon and a transient mouse model.
Authors:Kim M, Shin D, Kim SI, Park M.
Journal:Virus Res. 2006 Dec;122(1-2):1-10. Epub 2006 Sep 15.
Entrez:16979254
Article:Inhibition of hepatitis C virus gene expression by small interfering RNAs using a tri-cistronic full-length viral replicon and a transient mouse model.
Authors:Kim M, Shin D, Kim SI, Park M.
Journal:Virus Res. 2006 Dec;122(1-2):1-10. Epub 2006 Sep 15.
Entrez:16979254
siRNA sequence "gguuaggauguaugugggg" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "gguuaggauguaugugggg" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1396 " record
Length: 21
GC Content:48 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:48 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "gguuaggauguaugugggg" siRNA in Human Genome sequences
See AY587299 at Genbank
Pubmed:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
siRNA sequence "ugagacagacgugaugcuc" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "ugagacagacgugaugcuc" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1398 " record
Length: 21
GC Content:48 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:48 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "ugagacagacgugaugcuc" siRNA in Human Genome sequences
See AY587299 at Genbank
Pubmed:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
siRNA sequence "auugcaaugacucccucca" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "auugcaaugacucccucca" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1400 " record
Length: 21
GC Content:43 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 21
GC Content:43 %
GenBank Acc: AY587299
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "auugcaaugacucccucca" siRNA in Human Genome sequences
See AY587299 at Genbank
Pubmed:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
Article:RNA interference effectively inhibits mRNA accumulation and protein expression of hepatitis C virus core and E2 genes in human cells.
Authors:Liu M, Ding H, Zhao P, Qin ZL, Gao J, Cao MM, Luan J, Wu WB, Qi ZT.
Journal:Biosci Biotechnol Biochem. 2006 Sep;70(9):2049-55. Epub 2006 Sep 7.
Entrez:16960393
| VIRsiRNAid | siRNA Sequence |  Virus_Name | Target Region | Cell Line | Test Object | Efficacy | PMID | Offtarget | Align With | ALIGN0 Result |
|---|---|---|---|---|---|---|---|---|---|---|
| virsi1399 | cugguucggcuguacaugg | Hepatitis C Virus [HCV] |  SL | refseqs |  | |||||
| virsi1402 | uccagcuugugaauaccaa | Hepatitis C Virus [HCV] | SL | refseqs |  | |||||
| virsi1179 | cauuguggacgugcaguac | Hepatitis C Virus [HCV] | SL | refseqs |  | |||||
| virsi2136 | aaggcacaugguaucgacccu | Hepatitis C Virus [HCV] | SL | refseqs |  | |||||
| virsi1396 | gguuaggauguaugugggg | Hepatitis C Virus [HCV] | SL | refseqs |  | |||||
| virsi1398 | ugagacagacgugaugcuc | Hepatitis C Virus [HCV] | SL | refseqs |  | |||||
| virsi1400 | auugcaaugacucccucca | Hepatitis C Virus [HCV] | SL | refseqs |  |
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific SL: siRNA seedlocator algorithm