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- Family of Virus
- Virus Name
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- VsiRNAid
Total number of Results for IRES are 3
Results from 0 - 25
siRNA sequence "ggucucguagaccgugcac" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "ggucucguagaccgugcac" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1981 " record
Length: 19
GC Content:63 %
Starting position: 322
Strain of Virus: Genotype 1b
GenBank Acc: AJ242654
Transfection Reagent: RNAiMAX
Incubation Time (Hours):48
Length: 19
GC Content:63 %
Starting position: 322
Strain of Virus: Genotype 1b
GenBank Acc: AJ242654
Transfection Reagent: RNAiMAX
Incubation Time (Hours):48
Offtargets for "ggucucguagaccgugcac" siRNA in Human Genome sequences
See AJ242654 at Genbank
Pubmed:20534349
Article:The efficacy of siRNAs against hepatitis C virus is strongly influenced by structure and target site accessibility.
Authors:Sagan SM, Nasheri N, Luebbert C, Pezacki JP.
Journal:Chem Biol. 2010 May 28;17(5):515-27.
Entrez:20534349
Article:The efficacy of siRNAs against hepatitis C virus is strongly influenced by structure and target site accessibility.
Authors:Sagan SM, Nasheri N, Luebbert C, Pezacki JP.
Journal:Chem Biol. 2010 May 28;17(5):515-27.
Entrez:20534349
siRNA sequence "aggucucguagaccgugca" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "aggucucguagaccgugca" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Offtargets for "aggucucguagaccgugca" siRNA in Human Genome sequences
Pubmed:16872906
Article:Simultaneous targeting of HCV replication and viral binding with a single lentiviral vector containing multiple RNA interference expression cassettes.
Authors:Henry SD, van der Wegen P, Metselaar HJ, Tilanus HW, Scholte BJ, van der Laan LJ.
Journal:Mol Ther. 2006 Oct;14(4):485-93. Epub 2006 Jul 26.
Entrez:16872906
Article:Simultaneous targeting of HCV replication and viral binding with a single lentiviral vector containing multiple RNA interference expression cassettes.
Authors:Henry SD, van der Wegen P, Metselaar HJ, Tilanus HW, Scholte BJ, van der Laan LJ.
Journal:Mol Ther. 2006 Oct;14(4):485-93. Epub 2006 Jul 26.
Entrez:16872906
siRNA sequence "ggaagcaguuccucuggaa" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "ggaagcaguuccucuggaa" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1972 " record
Length: 19
GC Content:53 %
Starting position: 1406
Strain of Virus: Genotype 1b
GenBank Acc: AB237837
Transfection Reagent: TransIT-TKO
Incubation Time (Hours):48
Length: 19
GC Content:53 %
Starting position: 1406
Strain of Virus: Genotype 1b
GenBank Acc: AB237837
Transfection Reagent: TransIT-TKO
Incubation Time (Hours):48
Offtargets for "ggaagcaguuccucuggaa" siRNA in Human Genome sequences
See AB237837 at Genbank
Pubmed:20464448
Article:Comparative analysis of intracellular inhibition of hepatitis C virus replication by small interfering RNAs.
Authors:Chang B, Lee CH, Lee JH, Lee SW.
Journal:Biotechnol Lett. 2010 Sep;32(9):1231-7. Epub 2010 May 13.
Entrez:20464448
Article:Comparative analysis of intracellular inhibition of hepatitis C virus replication by small interfering RNAs.
Authors:Chang B, Lee CH, Lee JH, Lee SW.
Journal:Biotechnol Lett. 2010 Sep;32(9):1231-7. Epub 2010 May 13.
Entrez:20464448
| VIRsiRNAid | siRNA Sequence |  Virus_Name | Target Region | Cell Line | Test Object | Efficacy | PMID | Offtarget | Align With | ALIGN0 Result |
|---|---|---|---|---|---|---|---|---|---|---|
| virsi1981 | ggucucguagaccgugcac | Hepatitis C Virus [HCV] |  SL | refseqs |  | |||||
| virsi1182 | aggucucguagaccgugca | Hepatitis C Virus [HCV] | SL | refseqs |  | |||||
| virsi1972 | ggaagcaguuccucuggaa | Hepatitis C Virus [HCV] |  SL | refseqs |  |
: siRNA specific for both strands: siRNA specific for only one strands
: siRNA Not specific SL: siRNA seedlocator algorithm