VIRsiRNAdb

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Total number of Results for UL38 are 2
Results from 0 - 25

siRNA sequence "gaauguaacucgaucugcu" alignment with "Herpes Simplex Virus [HSV]" virus reference Genome sequences
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Browse all the records for "Herpes Simplex Virus [HSV]" virus
Browse "virsi1909 " record
Length: 19
GC Content:42 %
Starting position: 60467
Strain of Virus: 6B
GenBank Acc: AB021506
Transfection Reagent: Oligofectamine

Offtargets for "gaauguaacucgaucugcu" siRNA in Human Genome sequences
See AB021506 at Genbank
Pubmed:15469723
Article:Inhibition of herpesvirus-6B RNA replication by short interference RNAs.
Authors:Yoon JS, Kim SH, Shin MC, Hong SK, Jung YT, Khang IG, Shin WS, Kim CC, Paik SY.
Journal:J Biochem Mol Biol. 2004 May 31;37(3):383-5.
Entrez:15469723

siRNA sequence "uguuuacgauucgaucga" alignment with "Herpes Simplex Virus [HSV]" virus reference Genome sequences
Sorry unable to load image
Browse all the records for "Herpes Simplex Virus [HSV]" virus
Browse "virsi1910 " record
Length: 18
GC Content:39 %
Starting position: 60244
Strain of Virus: 6B
GenBank Acc: AB021506
Transfection Reagent: Oligofectamine

Offtargets for "uguuuacgauucgaucga" siRNA in Human Genome sequences
See AB021506 at Genbank
Pubmed:15469723
Article:Inhibition of herpesvirus-6B RNA replication by short interference RNAs.
Authors:Yoon JS, Kim SH, Shin MC, Hong SK, Jung YT, Khang IG, Shin WS, Kim CC, Paik SY.
Journal:J Biochem Mol Biol. 2004 May 31;37(3):383-5.
Entrez:15469723


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1909	gaauguaacucgaucugcu	Herpes Simplex Virus [HSV]	UL38	SupT1	Protein	Medium	15469723	Blast SL	refseqs
virsi1910	uguuuacgauucgaucga	Herpes Simplex Virus [HSV]	UL38	SupT1	Protein	Medium	15469723	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm