VIRsiRNAdb

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Total number of Results for VP3 are 3
Results from 0 - 25

siRNA sequence "ggacugcaaacacuaccuu" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "ggacugcaaacacuaccuu" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2031 " record
Length: 19
GC Content:47 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ggacugcaaacacuaccuu" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "ccagacacauacuccucag" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "ccagacacauacuccucag" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2032 " record
Length: 19
GC Content:53 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "ccagacacauacuccucag" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593

siRNA sequence "uccaugugcacugccuugg" alignment with "Human Rhinovirus" virus reference Genome sequences
siRNA sequence matching with "uccaugugcacugccuugg" Human Rhinovirus" Virus reference Genome sequences
Browse all the records for "Human Rhinovirus" virus
Browse "virsi2030 " record
Length: 19
GC Content:58 %
GenBank Acc: L24917
Transfection Reagent: Oligofectamine
Incubation Time (Hours):72

Offtargets for "uccaugugcacugccuugg" siRNA in Human Genome sequences
See L24917 at Genbank
Pubmed:14670593
Article:Small interfering RNA molecules as potential anti-human rhinovirus agents: in vitro potency, specificity, and mechanism.
Authors:Phipps KM, Martinez A, Lu J, Heinz BA, Zhao G.
Journal:Antiviral Res. 2004 Jan;61(1):49-55.
Entrez:14670593


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2031	ggacugcaaacacuaccuu	Human Rhinovirus	VP3	HeLa	Plaque Count	93	14670593	Blast SL	refseqs
virsi2032	ccagacacauacuccucag	Human Rhinovirus	VP3	HeLa	Plaque Count	71	14670593	Blast SL	refseqs
virsi2030	uccaugugcacugccuugg	Human Rhinovirus	VP3	HeLa	Plaque Count	0	14670593	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm