VIRsiRNAdb

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Total number of Results for 15120607 are 6
Results from 0 - 25

siRNA sequence "gguugaaguuaaaccugcu" alignment with "Hepatitis A Virus [HAV]" virus reference Genome sequences
siRNA sequence matching with "gguugaaguuaaaccugcu" Hepatitis A Virus [HAV]" Virus reference Genome sequences
Browse all the records for "Hepatitis A Virus [HAV]" virus
Browse "virsi1010 " record
Length: 19
GC Content:42 %
Starting position: 4765
Strain of Virus: HM175
GenBank Acc: M59808
Transfection Reagent: TransMessenger
Incubation Time (Hours):48

Offtargets for "gguugaaguuaaaccugcu" siRNA in Human Genome sequences
See M59808 at Genbank
Pubmed:15120607
Article:Interference of hepatitis A virus replication by small interfering RNAs.
Authors:Kanda T, Kusov Y, Yokosuka O, Gauss-MÃŒller V.
Journal:Biochem Biophys Res Commun. 2004 May 28;318(2):341-5.
Entrez:15120607

siRNA sequence "agcugaaauugauccaaug" alignment with "Hepatitis A Virus [HAV]" virus reference Genome sequences
siRNA sequence matching with "agcugaaauugauccaaug" Hepatitis A Virus [HAV]" Virus reference Genome sequences
Browse all the records for "Hepatitis A Virus [HAV]" virus
Browse "virsi1014 " record
Length: 19
GC Content:37 %
Starting position: 6058
Strain of Virus: HM175
GenBank Acc: M59808
Transfection Reagent: TransMessenger
Incubation Time (Hours):48

Offtargets for "agcugaaauugauccaaug" siRNA in Human Genome sequences
See M59808 at Genbank
Pubmed:15120607
Article:Interference of hepatitis A virus replication by small interfering RNAs.
Authors:Kanda T, Kusov Y, Yokosuka O, Gauss-MÃŒller V.
Journal:Biochem Biophys Res Commun. 2004 May 28;318(2):341-5.
Entrez:15120607

siRNA sequence "gaaacuuggcaugacagcu" alignment with "Hepatitis A Virus [HAV]" virus reference Genome sequences
siRNA sequence matching with "gaaacuuggcaugacagcu" Hepatitis A Virus [HAV]" Virus reference Genome sequences
Browse all the records for "Hepatitis A Virus [HAV]" virus
Browse "virsi1015 " record
Length: 19
GC Content:47 %
Starting position: 7042
Strain of Virus: HM175
GenBank Acc: M59808
Transfection Reagent: TransMessenger
Incubation Time (Hours):48

Offtargets for "gaaacuuggcaugacagcu" siRNA in Human Genome sequences
See M59808 at Genbank
Pubmed:15120607
Article:Interference of hepatitis A virus replication by small interfering RNAs.
Authors:Kanda T, Kusov Y, Yokosuka O, Gauss-MÃŒller V.
Journal:Biochem Biophys Res Commun. 2004 May 28;318(2):341-5.
Entrez:15120607

siRNA sequence "uagagguggaacuuacuau" alignment with "Hepatitis A Virus [HAV]" virus reference Genome sequences
siRNA sequence matching with "uagagguggaacuuacuau" Hepatitis A Virus [HAV]" Virus reference Genome sequences
Browse all the records for "Hepatitis A Virus [HAV]" virus
Browse "virsi1013 " record
Length: 19
GC Content:37 %
Starting position: 5449
Strain of Virus: HM175
GenBank Acc: M59808
Transfection Reagent: TransMessenger
Incubation Time (Hours):48

Offtargets for "uagagguggaacuuacuau" siRNA in Human Genome sequences
See M59808 at Genbank
Pubmed:15120607
Article:Interference of hepatitis A virus replication by small interfering RNAs.
Authors:Kanda T, Kusov Y, Yokosuka O, Gauss-MÃŒller V.
Journal:Biochem Biophys Res Commun. 2004 May 28;318(2):341-5.
Entrez:15120607

siRNA sequence "ugauauguugaauguuaau" alignment with "Hepatitis A Virus [HAV]" virus reference Genome sequences
siRNA sequence matching with "ugauauguugaauguuaau" Hepatitis A Virus [HAV]" Virus reference Genome sequences
Browse all the records for "Hepatitis A Virus [HAV]" virus
Browse "virsi1011 " record
Length: 19
GC Content:21 %
Starting position: 4807
Strain of Virus: HM175
GenBank Acc: M59808
Transfection Reagent: TransMessenger
Incubation Time (Hours):48

Offtargets for "ugauauguugaauguuaau" siRNA in Human Genome sequences
See M59808 at Genbank
Pubmed:15120607
Article:Interference of hepatitis A virus replication by small interfering RNAs.
Authors:Kanda T, Kusov Y, Yokosuka O, Gauss-MÃŒller V.
Journal:Biochem Biophys Res Commun. 2004 May 28;318(2):341-5.
Entrez:15120607

siRNA sequence "ugauagugcaguagcugag" alignment with "Hepatitis A Virus [HAV]" virus reference Genome sequences
siRNA sequence matching with "ugauagugcaguagcugag" Hepatitis A Virus [HAV]" Virus reference Genome sequences
Browse all the records for "Hepatitis A Virus [HAV]" virus
Browse "virsi1012 " record
Length: 19
GC Content:47 %
Starting position: 4999
Strain of Virus: HM175
GenBank Acc: M59808
Transfection Reagent: TransMessenger
Incubation Time (Hours):48

Offtargets for "ugauagugcaguagcugag" siRNA in Human Genome sequences
See M59808 at Genbank
Pubmed:15120607
Article:Interference of hepatitis A virus replication by small interfering RNAs.
Authors:Kanda T, Kusov Y, Yokosuka O, Gauss-MÃŒller V.
Journal:Biochem Biophys Res Commun. 2004 May 28;318(2):341-5.
Entrez:15120607


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1010	gguugaaguuaaaccugcu	Hepatitis A Virus [HAV]	2C	Huh-T7	Protein	75	15120607	Blast SL	refseqs
virsi1014	agcugaaauugauccaaug	Hepatitis A Virus [HAV]	3D	Huh-T7	Protein	66	15120607	Blast SL	refseqs
virsi1015	gaaacuuggcaugacagcu	Hepatitis A Virus [HAV]	3D	Huh-T7	Protein	49	15120607	Blast SL	refseqs
virsi1013	uagagguggaacuuacuau	Hepatitis A Virus [HAV]	3C	Huh-T7	Protein	22	15120607	Blast SL	refseqs
virsi1011	ugauauguugaauguuaau	Hepatitis A Virus [HAV]	2C	Huh-T7	Protein	0	15120607	Blast SL	refseqs
virsi1012	ugauagugcaguagcugag	Hepatitis A Virus [HAV]	3A	Huh-T7	Protein	0	15120607	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm