VIRsiRNAdb

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Total number of Results for 15681418 are 5
Results from 0 - 25

siRNA sequence "gguccaagagagugaauac" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "gguccaagagagugaauac" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1790 " record
Length: 19
GC Content:47 %
Starting position: 3543
Strain of Virus: CVB3
GenBank Acc: M33854
Transfection Reagent: Oligofectamine

Offtargets for "gguccaagagagugaauac" siRNA in Human Genome sequences
See M33854 at Genbank
Pubmed:15681418
Article:Inhibition of coxsackievirus B3 replication by small interfering RNAs requires perfect sequence match in the central region of the viral positive strand.
Authors:Yuan J, Cheung PK, Zhang HM, Chau D, Yang D.
Journal:J Virol. 2005 Feb;79(4):2151-9.
Entrez:15681418

siRNA sequence "gcaugucaaagcguggaua" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "gcaugucaaagcguggaua" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1789 " record
Length: 19
GC Content:47 %
Starting position: 3171
Strain of Virus: CVB3
GenBank Acc: M33854
Transfection Reagent: Oligofectamine

Offtargets for "gcaugucaaagcguggaua" siRNA in Human Genome sequences
See M33854 at Genbank
Pubmed:15681418
Article:Inhibition of coxsackievirus B3 replication by small interfering RNAs requires perfect sequence match in the central region of the viral positive strand.
Authors:Yuan J, Cheung PK, Zhang HM, Chau D, Yang D.
Journal:J Virol. 2005 Feb;79(4):2151-9.
Entrez:15681418

siRNA sequence "gacuaaggaccuaacaaag" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "gacuaaggaccuaacaaag" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1791 " record
Length: 19
GC Content:42 %
Starting position: 6312
Strain of Virus: CVB3
GenBank Acc: M33854
Transfection Reagent: Oligofectamine

Offtargets for "gacuaaggaccuaacaaag" siRNA in Human Genome sequences
See M33854 at Genbank
Pubmed:15681418
Article:Inhibition of coxsackievirus B3 replication by small interfering RNAs requires perfect sequence match in the central region of the viral positive strand.
Authors:Yuan J, Cheung PK, Zhang HM, Chau D, Yang D.
Journal:J Virol. 2005 Feb;79(4):2151-9.
Entrez:15681418

siRNA sequence "guaacacacaccgaucaac" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "guaacacacaccgaucaac" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1787 " record
Length: 19
GC Content:47 %
Starting position: 115
Strain of Virus: CVB3
GenBank Acc: M33854
Transfection Reagent: Oligofectamine

Offtargets for "guaacacacaccgaucaac" siRNA in Human Genome sequences
See M33854 at Genbank
Pubmed:15681418
Article:Inhibition of coxsackievirus B3 replication by small interfering RNAs requires perfect sequence match in the central region of the viral positive strand.
Authors:Yuan J, Cheung PK, Zhang HM, Chau D, Yang D.
Journal:J Virol. 2005 Feb;79(4):2151-9.
Entrez:15681418

siRNA sequence "uacagcaaaaugggagcuc" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "uacagcaaaaugggagcuc" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1788 " record
Length: 19
GC Content:47 %
Starting position: 733
Strain of Virus: CVB3
GenBank Acc: M33854
Transfection Reagent: Oligofectamine

Offtargets for "uacagcaaaaugggagcuc" siRNA in Human Genome sequences
See M33854 at Genbank
Pubmed:15681418
Article:Inhibition of coxsackievirus B3 replication by small interfering RNAs requires perfect sequence match in the central region of the viral positive strand.
Authors:Yuan J, Cheung PK, Zhang HM, Chau D, Yang D.
Journal:J Virol. 2005 Feb;79(4):2151-9.
Entrez:15681418


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1790	gguccaagagagugaauac	Human Coxsackievirus [CV]	2A	HeLa	Protein	92	15681418	Blast SL	refseqs
virsi1789	gcaugucaaagcguggaua	Human Coxsackievirus [CV]	VP1	HeLa	Protein	85	15681418	Blast SL	refseqs
virsi1791	gacuaaggaccuaacaaag	Human Coxsackievirus [CV]	3D	HeLa	Protein	64	15681418	Blast SL	refseqs
virsi1787	guaacacacaccgaucaac	Human Coxsackievirus [CV]	5'UTR	HeLa	Protein	31	15681418	Blast SL	refseqs
virsi1788	uacagcaaaaugggagcuc	Human Coxsackievirus [CV]	Start Codon Region	HeLa	Protein	18	15681418	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm