VIRsiRNAdb

Browse BY

• Family of Virus


• Virus Name


• Gene Name


• Pubmed Id


• VsiRNAid

Total number of Results for 15747251 are 5
Results from 0 - 25

siRNA sequence "gcugcgugacuaucauguc" alignment with "West Nile Virus [WNV]" virus reference Genome sequences
siRNA sequence matching with "gcugcgugacuaucauguc" West Nile Virus [WNV]" Virus reference Genome sequences
Browse all the records for "West Nile Virus [WNV]" virus
Browse "virsi1491 " record
Length: 19
GC Content:53 %
Starting position: 86
Strain of Virus: WNV Isolate 2471
GenBank Acc: HA063760
Transfection Reagent: siPORT Amine/Lipid
Incubation Time (Hours):24

Offtargets for "gcugcgugacuaucauguc" siRNA in Human Genome sequences
See HA063760 at Genbank
Pubmed:15747251
Article:Use of RNA interference to prevent lethal murine west nile virus infection.
Authors:Bai F, Wang T, Pal U, Bao F, Gould LH, Fikrig E.
Journal:J Infect Dis. 2005 Apr 1;191(7):1148-54. Epub 2005 Feb 23.
Entrez:15747251

siRNA sequence "ugacaaacgugcugaccca" alignment with "West Nile Virus [WNV]" virus reference Genome sequences
siRNA sequence matching with "ugacaaacgugcugaccca" West Nile Virus [WNV]" Virus reference Genome sequences
Browse all the records for "West Nile Virus [WNV]" virus
Browse "virsi1492 " record
Length: 19
GC Content:53 %
Starting position: 246
Strain of Virus: WNV Isolate 2471
GenBank Acc: HA063760
Transfection Reagent: siPORT Amine/Lipid
Incubation Time (Hours):24

Offtargets for "ugacaaacgugcugaccca" siRNA in Human Genome sequences
See HA063760 at Genbank
Pubmed:15747251
Article:Use of RNA interference to prevent lethal murine west nile virus infection.
Authors:Bai F, Wang T, Pal U, Bao F, Gould LH, Fikrig E.
Journal:J Infect Dis. 2005 Apr 1;191(7):1148-54. Epub 2005 Feb 23.
Entrez:15747251

siRNA sequence "uugacacaugcgccaaauu" alignment with "West Nile Virus [WNV]" virus reference Genome sequences
siRNA sequence matching with "uugacacaugcgccaaauu" West Nile Virus [WNV]" Virus reference Genome sequences
Browse all the records for "West Nile Virus [WNV]" virus
Browse "virsi1493 " record
Length: 19
GC Content:42 %
Starting position: 338
Strain of Virus: WNV Isolate 2471
GenBank Acc: HA063760
Transfection Reagent: siPORT Amine/Lipid
Incubation Time (Hours):24

Offtargets for "uugacacaugcgccaaauu" siRNA in Human Genome sequences
See HA063760 at Genbank
Pubmed:15747251
Article:Use of RNA interference to prevent lethal murine west nile virus infection.
Authors:Bai F, Wang T, Pal U, Bao F, Gould LH, Fikrig E.
Journal:J Infect Dis. 2005 Apr 1;191(7):1148-54. Epub 2005 Feb 23.
Entrez:15747251

siRNA sequence "caaccuauggcgucuguuc" alignment with "West Nile Virus [WNV]" virus reference Genome sequences
siRNA sequence matching with "caaccuauggcgucuguuc" West Nile Virus [WNV]" Virus reference Genome sequences
Browse all the records for "West Nile Virus [WNV]" virus
Browse "virsi1494 " record
Length: 19
GC Content:53 %
Starting position: 899
Strain of Virus: WNV Isolate 2471
GenBank Acc: HA063760
Transfection Reagent: siPORT Amine/Lipid
Incubation Time (Hours):24

Offtargets for "caaccuauggcgucuguuc" siRNA in Human Genome sequences
See HA063760 at Genbank
Pubmed:15747251
Article:Use of RNA interference to prevent lethal murine west nile virus infection.
Authors:Bai F, Wang T, Pal U, Bao F, Gould LH, Fikrig E.
Journal:J Infect Dis. 2005 Apr 1;191(7):1148-54. Epub 2005 Feb 23.
Entrez:15747251

siRNA sequence "augcucgugauagguccau" alignment with "West Nile Virus [WNV]" virus reference Genome sequences
siRNA sequence matching with "augcucgugauagguccau" West Nile Virus [WNV]" Virus reference Genome sequences
Browse all the records for "West Nile Virus [WNV]" virus
Browse "virsi1495 " record
Length: 19
GC Content:47 %
Starting position: 1424
Strain of Virus: WNV Isolate 2471
GenBank Acc: HA063760
Transfection Reagent: siPORT Amine/Lipid
Incubation Time (Hours):24

Offtargets for "augcucgugauagguccau" siRNA in Human Genome sequences
See HA063760 at Genbank
Pubmed:15747251
Article:Use of RNA interference to prevent lethal murine west nile virus infection.
Authors:Bai F, Wang T, Pal U, Bao F, Gould LH, Fikrig E.
Journal:J Infect Dis. 2005 Apr 1;191(7):1148-54. Epub 2005 Feb 23.
Entrez:15747251


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1491	gcugcgugacuaucauguc	West Nile Virus [WNV]	E	Vero	Viral Load	76	15747251	Blast SL	refseqs
virsi1492	ugacaaacgugcugaccca	West Nile Virus [WNV]	E	Vero	Viral Load	62	15747251	Blast SL	refseqs
virsi1493	uugacacaugcgccaaauu	West Nile Virus [WNV]	E	Vero	Viral Load	51	15747251	Blast SL	refseqs
virsi1494	caaccuauggcgucuguuc	West Nile Virus [WNV]	E	Vero	Viral Load	48	15747251	Blast SL	refseqs
virsi1495	augcucgugauagguccau	West Nile Virus [WNV]	E	Vero	Viral Load	40	15747251	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm