VIRsiRNAdb

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Total number of Results for 16120770 are 3
Results from 0 - 25

siRNA sequence "agguauuugaauuugcau" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "agguauuugaauuugcau" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1726 " record
Length: 18
GC Content:28 %
Starting position: 232
Strain of Virus: HPV18
GenBank Acc: NC_001357
Transfection Reagent: Oligofectamine
Incubation Time (Hours):24

Offtargets for "agguauuugaauuugcau" siRNA in Human Genome sequences
See NC_001357 at Genbank
Pubmed:16120770
Article:RNA interference against human papillomavirus oncogenes in cervical cancer cells results in increased sensitivity to cisplatin.
Authors:Putral LN, Bywater MJ, Gu W, Saunders NA, Gabrielli BG, Leggatt GR, McMillan NA.
Journal:Mol Pharmacol. 2005 Nov;68(5):1311-9. Epub 2005 Aug 24.
Entrez:16120770

siRNA sequence "gcaacaguuacugcgacgu" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "gcaacaguuacugcgacgu" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1724 " record
Length: 19
GC Content:53 %
Starting position: 205
Strain of Virus: HPV16
GenBank Acc: NC_001526
Transfection Reagent: Oligofectamine
Incubation Time (Hours):24

Offtargets for "gcaacaguuacugcgacgu" siRNA in Human Genome sequences
See NC_001526 at Genbank
Pubmed:16120770
Article:RNA interference against human papillomavirus oncogenes in cervical cancer cells results in increased sensitivity to cisplatin.
Authors:Putral LN, Bywater MJ, Gu W, Saunders NA, Gabrielli BG, Leggatt GR, McMillan NA.
Journal:Mol Pharmacol. 2005 Nov;68(5):1311-9. Epub 2005 Aug 24.
Entrez:16120770

siRNA sequence "cacguagagaaacccagcu" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "cacguagagaaacccagcu" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1725 " record
Length: 19
GC Content:53 %
Starting position: 537
Strain of Virus: HPV16
GenBank Acc: NC_001526
Transfection Reagent: Oligofectamine
Incubation Time (Hours):24

Offtargets for "cacguagagaaacccagcu" siRNA in Human Genome sequences
See NC_001526 at Genbank
Pubmed:16120770
Article:RNA interference against human papillomavirus oncogenes in cervical cancer cells results in increased sensitivity to cisplatin.
Authors:Putral LN, Bywater MJ, Gu W, Saunders NA, Gabrielli BG, Leggatt GR, McMillan NA.
Journal:Mol Pharmacol. 2005 Nov;68(5):1311-9. Epub 2005 Aug 24.
Entrez:16120770


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1726	agguauuugaauuugcau	Human Papillomavirus [HPV]	E6	CaSki	Protein	90	16120770	Blast SL	refseqs
virsi1724	gcaacaguuacugcgacgu	Human Papillomavirus [HPV]	E6	CaSki	Protein	81	16120770	Blast SL	refseqs
virsi1725	cacguagagaaacccagcu	Human Papillomavirus [HPV]	E6	CaSki	Protein	79	16120770	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm