VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
17151097
are
2
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi2171
gugauucaacaaugaccaa
Human Respiratory Syncytial Virus [HRSV]
NS1
A549
mRNA
High
17151097
Blast
SL
refseqs
     
siRNA sequence "
gugauucaacaaugaccaa
" alignment with "
Human Respiratory Syncytial Virus [HRSV]
" virus reference Genome sequences
siRNA sequence matching with "
gugauucaacaaugaccaa
"
Human Respiratory Syncytial Virus [HRSV]
" Virus reference Genome sequences
Browse all the records for "
Human Respiratory Syncytial Virus [HRSV]
" virus
Browse "
virsi2171
" record
Length:
19
GC Content:
37 %
GenBank Acc:
U35029
Transfection Reagent:
TransIT-TKO
Incubation Time (Hours):
60
Offtargets for "
gugauucaacaaugaccaa
" siRNA in Human Genome sequences
See
U35029
at Genbank
Pubmed:
17151097
Article:
Nonstructural proteins of respiratory syncytial virus suppress premature apoptosis by an NF-kappaB-dependent, interferon-independent mechanism and facilitate virus growth.
Authors:
Bitko V, Shulyayeva O, Mazumder B, Musiyenko A, Ramaswamy M, Look DC, Barik S.
Journal:
J Virol. 2007 Feb;81(4):1786-95. Epub 2006 Dec 6.
Entrez:
17151097
virsi2172
gacaugagaccguugucac
Human Respiratory Syncytial Virus [HRSV]
NS2
A549
Protein
High
17151097
Blast
SL
refseqs
     
siRNA sequence "
gacaugagaccguugucac
" alignment with "
Human Respiratory Syncytial Virus [HRSV]
" virus reference Genome sequences
siRNA sequence matching with "
gacaugagaccguugucac
"
Human Respiratory Syncytial Virus [HRSV]
" Virus reference Genome sequences
Browse all the records for "
Human Respiratory Syncytial Virus [HRSV]
" virus
Browse "
virsi2172
" record
Length:
19
GC Content:
53 %
GenBank Acc:
U35029
Transfection Reagent:
TransIT-TKO
Incubation Time (Hours):
60
Offtargets for "
gacaugagaccguugucac
" siRNA in Human Genome sequences
See
U35029
at Genbank
Pubmed:
17151097
Article:
Nonstructural proteins of respiratory syncytial virus suppress premature apoptosis by an NF-kappaB-dependent, interferon-independent mechanism and facilitate virus growth.
Authors:
Bitko V, Shulyayeva O, Mazumder B, Musiyenko A, Ramaswamy M, Look DC, Barik S.
Journal:
J Virol. 2007 Feb;81(4):1786-95. Epub 2006 Dec 6.
Entrez:
17151097
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm