VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
17575104
are
2
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1764
ccguugugugauuuguuaa
Human Papillomavirus [HPV]
E6
CaSki
mRNA
60
17575104
Blast
SL
refseqs
     
siRNA sequence "
ccguugugugauuuguuaa
" alignment with "
Human Papillomavirus [HPV]
" virus reference Genome sequences
siRNA sequence matching with "
ccguugugugauuuguuaa
"
Human Papillomavirus [HPV]
" Virus reference Genome sequences
Browse all the records for "
Human Papillomavirus [HPV]
" virus
Browse "
virsi1764
" record
Length:
19
GC Content:
37 %
Starting position:
386
Strain of Virus:
HPV16
GenBank Acc:
NC_001526
Transfection Reagent:
Hiperfect
Incubation Time (Hours):
48
Offtargets for "
ccguugugugauuuguuaa
" siRNA in Human Genome sequences
See
NC_001526
at Genbank
Pubmed:
17575104
Article:
Suppression of cervical carcinoma cell growth by intracytoplasmic codelivery of anti-oncoprotein E6 antibody and small interfering RNA.
Authors:
Courtête J, Sibler AP, Zeder-Lutz G, Dalkara D, Oulad-Abdelghani M, Zuber G, Weiss E.
Journal:
Mol Cancer Ther. 2007 Jun;6(6):1728-35.
Entrez:
17575104
virsi1765
cuaacuaacacuggguuau
Human Papillomavirus [HPV]
E6
CaSki
mRNA
60
17575104
Blast
SL
refseqs
     
siRNA sequence "
cuaacuaacacuggguuau
" alignment with "
Human Papillomavirus [HPV]
" virus reference Genome sequences
siRNA sequence matching with "
cuaacuaacacuggguuau
"
Human Papillomavirus [HPV]
" Virus reference Genome sequences
Browse all the records for "
Human Papillomavirus [HPV]
" virus
Browse "
virsi1765
" record
Length:
19
GC Content:
37 %
Starting position:
381
Strain of Virus:
HPV16
GenBank Acc:
NC_001357
Transfection Reagent:
Hiperfect
Incubation Time (Hours):
48
Offtargets for "
cuaacuaacacuggguuau
" siRNA in Human Genome sequences
See
NC_001357
at Genbank
Pubmed:
17575104
Article:
Suppression of cervical carcinoma cell growth by intracytoplasmic codelivery of anti-oncoprotein E6 antibody and small interfering RNA.
Authors:
Courtête J, Sibler AP, Zeder-Lutz G, Dalkara D, Oulad-Abdelghani M, Zuber G, Weiss E.
Journal:
Mol Cancer Ther. 2007 Jun;6(6):1728-35.
Entrez:
17575104
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm