VIRsiRNAdb
Database of Viral siRNA / shRNA
Home
Search
Advance Search
Browse
By Family
By Virus
Gene
Pubmed
VIRsiID
EscapeDb
Tools
siTarAlign
siRNAmap
VIRsiblast
Submit
About
Database
Tools
Search
Browse
Team
Contact
Browse BY
Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
18172750
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1792
aguccaaaugccguauuga
Human Coxsackievirus [CV]
MET-2C
HeLa
Protein
Low
18172750
Blast
SL
refseqs
     
siRNA sequence "
aguccaaaugccguauuga
" alignment with "
Human Coxsackievirus [CV]
" virus reference Genome sequences
siRNA sequence matching with "
aguccaaaugccguauuga
"
Human Coxsackievirus [CV]
" Virus reference Genome sequences
Browse all the records for "
Human Coxsackievirus [CV]
" virus
Browse "
virsi1792
" record
Length:
19
GC Content:
42 %
Starting position:
4385
Strain of Virus:
CVB Variant, Woodruff Strain (H3 Strain)
GenBank Acc:
M33854
Incubation Time (Hours):
20
Offtargets for "
aguccaaaugccguauuga
" siRNA in Human Genome sequences
See
M33854
at Genbank
Pubmed:
18172750
Article:
Recombinant lentivirus-delivered short hairpin RNAs targeted to conserved coxsackievirus sequences protect against viral myocarditis and improve survival rate in an animal model.
Authors:
Kim YJ, Ahn J, Jeung SY, Kim DS, Na HN, Cho YJ, Yun SH, Jee Y, Jeon ES, Lee H, Nam JH.
Journal:
Virus Genes. 2008 Feb;36(1):141-6. Epub 2008 Jan 3.
Entrez:
18172750
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm