VIRsiRNAdb

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Total number of Results for 19576249 are 4
Results from 0 - 25

siRNA sequence "guuuacaacuggugagaca" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "guuuacaacuggugagaca" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2189 " record
Length: 19
GC Content:42 %
Strain of Virus: 4
GenBank Acc: AY594199
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "guuuacaacuggugagaca" siRNA in Human Genome sequences
See AY594199 at Genbank
Pubmed:19576249
Article:Effective inhibition of hepatitis E virus replication in A549 cells and piglets by RNA interference (RNAi) targeting RNA-dependent RNA polymerase.
Authors:Huang F, Hua X, Yang S, Yuan C, Zhang W.
Journal:Antiviral Res. 2009 Sep;83(3):274-81. Epub 2009 Jul 1.
Entrez:19576249

siRNA sequence "cgugaugugucucggauaa" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "cgugaugugucucggauaa" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2188 " record
Length: 19
GC Content:47 %
Strain of Virus: 4
GenBank Acc: AY594199
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "cgugaugugucucggauaa" siRNA in Human Genome sequences
See AY594199 at Genbank
Pubmed:19576249
Article:Effective inhibition of hepatitis E virus replication in A549 cells and piglets by RNA interference (RNAi) targeting RNA-dependent RNA polymerase.
Authors:Huang F, Hua X, Yang S, Yuan C, Zhang W.
Journal:Antiviral Res. 2009 Sep;83(3):274-81. Epub 2009 Jul 1.
Entrez:19576249

siRNA sequence "ggguuagaguguauaauca" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "ggguuagaguguauaauca" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2190 " record
Length: 19
GC Content:37 %
Strain of Virus: 4
GenBank Acc: AY594199
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "ggguuagaguguauaauca" siRNA in Human Genome sequences
See AY594199 at Genbank
Pubmed:19576249
Article:Effective inhibition of hepatitis E virus replication in A549 cells and piglets by RNA interference (RNAi) targeting RNA-dependent RNA polymerase.
Authors:Huang F, Hua X, Yang S, Yuan C, Zhang W.
Journal:Antiviral Res. 2009 Sep;83(3):274-81. Epub 2009 Jul 1.
Entrez:19576249

siRNA sequence "guuccgugcuauugagaaa" alignment with "Hepatitis E Virus [HEV]" virus reference Genome sequences
siRNA sequence matching with "guuccgugcuauugagaaa" Hepatitis E Virus [HEV]" Virus reference Genome sequences
Browse all the records for "Hepatitis E Virus [HEV]" virus
Browse "virsi2187 " record
Length: 19
GC Content:42 %
Strain of Virus: 4
GenBank Acc: AY594199
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48

Offtargets for "guuccgugcuauugagaaa" siRNA in Human Genome sequences
See AY594199 at Genbank
Pubmed:19576249
Article:Effective inhibition of hepatitis E virus replication in A549 cells and piglets by RNA interference (RNAi) targeting RNA-dependent RNA polymerase.
Authors:Huang F, Hua X, Yang S, Yuan C, Zhang W.
Journal:Antiviral Res. 2009 Sep;83(3):274-81. Epub 2009 Jul 1.
Entrez:19576249


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2189	guuuacaacuggugagaca	Hepatitis E Virus [HEV]	RdRp	A549	mRNA	Medium	19576249	Blast SL	refseqs
virsi2188	cgugaugugucucggauaa	Hepatitis E Virus [HEV]	RdRp	A549	mRNA	Low	19576249	Blast SL	refseqs
virsi2190	ggguuagaguguauaauca	Hepatitis E Virus [HEV]	RdRp	A549	mRNA	Low	19576249	Blast SL	refseqs
virsi2187	guuccgugcuauugagaaa	Hepatitis E Virus [HEV]	RdRp	A549	mRNA	High	19576249	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm