VIRsiRNAdb

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Total number of Results for 20005874 are 2
Results from 0 - 25

siRNA sequence "cuaaggaccuaacaaaguu" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "cuaaggaccuaacaaaguu" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1793 " record
Length: 19
GC Content:37 %
Starting position: 6314
Strain of Virus: CVB3
GenBank Acc: M33854
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):19

Offtargets for "cuaaggaccuaacaaaguu" siRNA in Human Genome sequences
See M33854 at Genbank
Pubmed:20005874
Article:Application of small interfering RNAs modified by unlocked nucleic acid (UNA) to inhibit the heart-pathogenic coxsackievirus B3.
Authors:Werk D, Wengel J, Wengel SL, Grunert HP, Zeichhardt H, Kurreck J.
Journal:FEBS Lett. 2010 Feb 5;584(3):591-8. Epub 2010 Jan 13.
Entrez:20005874

siRNA sequence "ucucauagcauuugauuac" alignment with "Human Coxsackievirus [CV]" virus reference Genome sequences
siRNA sequence matching with "ucucauagcauuugauuac" Human Coxsackievirus [CV]" Virus reference Genome sequences
Browse all the records for "Human Coxsackievirus [CV]" virus
Browse "virsi1794 " record
Length: 19
GC Content:32 %
Starting position: 6594
Strain of Virus: CVB3
GenBank Acc: M33854
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):19

Offtargets for "ucucauagcauuugauuac" siRNA in Human Genome sequences
See M33854 at Genbank
Pubmed:20005874
Article:Application of small interfering RNAs modified by unlocked nucleic acid (UNA) to inhibit the heart-pathogenic coxsackievirus B3.
Authors:Werk D, Wengel J, Wengel SL, Grunert HP, Zeichhardt H, Kurreck J.
Journal:FEBS Lett. 2010 Feb 5;584(3):591-8. Epub 2010 Jan 13.
Entrez:20005874


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1793	cuaaggaccuaacaaaguu	Human Coxsackievirus [CV]	3D RdRp	COS-7	Viral Titer	91	20005874	Blast SL	refseqs
virsi1794	ucucauagcauuugauuac	Human Coxsackievirus [CV]	3D Rev	COS-7	Protein	87	20005874	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm