VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
virsi1284
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1284
ugcaucaacgcauguagaa
SARS Coronavirus
3A
FRhK-4
Protein
90
16894145
Blast
SL
refseqs
     
siRNA sequence "
ugcaucaacgcauguagaa
" alignment with "
SARS Coronavirus
" virus reference Genome sequences
siRNA sequence matching with "
ugcaucaacgcauguagaa
"
SARS Coronavirus
" Virus reference Genome sequences
Browse all the records for "
SARS Coronavirus
" virus
Browse "
virsi1284
" record
Length:
19
GC Content:
42 %
Starting position:
25600
Strain of Virus:
BJ04
GenBank Acc:
AY279354
Transfection Reagent:
Lipofectamine 2000
Incubation Time (Hours):
72
Offtargets for "
ugcaucaacgcauguagaa
" siRNA in Human Genome sequences
See
AY279354
at Genbank
Pubmed:
16894145
Article:
Severe acute respiratory syndrome-associated coronavirus 3a protein forms an ion channel and modulates virus release.
Authors:
Lu W, Zheng BJ, Xu K, Schwarz W, Du L, Wong CK, Chen J, Duan S, Deubel V, Sun B.
Journal:
Proc Natl Acad Sci U S A. 2006 Aug 15;103(33):12540-5. Epub 2006 Aug 7.
Entrez:
16894145
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm