VIRsiRNAdb
Database of Viral siRNA / shRNA
Home
Search
Advance Search
Browse
By Family
By Virus
Gene
Pubmed
VIRsiID
EscapeDb
Tools
siTarAlign
siRNAmap
VIRsiblast
Submit
About
Database
Tools
Search
Browse
Team
Contact
Browse BY
Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
virsi1644
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1644
ugggagugcagaugcagcg
Influenza A Virus
M
MDCK
Viral Titer
Low
17719657
Blast
SL
refseqs
     
siRNA sequence "
ugggagugcagaugcagcg
" alignment with "
Influenza A Virus
" virus reference Genome sequences
siRNA sequence matching with "
ugggagugcagaugcagcg
"
Influenza A Virus
" Virus reference Genome sequences
Browse all the records for "
Influenza A Virus
" virus
Browse "
virsi1644
" record
Length:
19
GC Content:
63 %
Starting position:
754
Strain of Virus:
A/Duck/Hubei/W1/2004(H9N2)
GenBank Acc:
DQ465403
Transfection Reagent:
Lipofectamine 2000
Incubation Time (Hours):
48
Offtargets for "
ugggagugcagaugcagcg
" siRNA in Human Genome sequences
See
DQ465403
at Genbank
Pubmed:
17719657
Article:
Effective small interfering RNAs targeting matrix and nucleocapsid protein gene inhibit influenza A virus replication in cells and mice.
Authors:
Zhou H, Jin M, Yu Z, Xu X, Peng Y, Wu H, Liu J, Liu H, Cao S, Chen H.
Journal:
Antiviral Res. 2007 Nov;76(2):186-93. Epub 2007 Aug 10.
Entrez:
17719657
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm