VIRsiRNAdb
Database of Viral siRNA / shRNA
Home
Search
Advance Search
Browse
By Family
By Virus
Gene
Pubmed
VIRsiID
EscapeDb
Tools
siTarAlign
siRNAmap
VIRsiblast
Submit
About
Database
Tools
Search
Browse
Team
Contact
Browse BY
Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
virsi1811
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1811
cuaaggaccuaacaaaguu
Human Coxsackievirus [CV]
3D
LLC-MK2
Viral Titer
90
19553393
Blast
SL
refseqs
     
siRNA sequence "
cuaaggaccuaacaaaguu
" alignment with "
Human Coxsackievirus [CV]
" virus reference Genome sequences
siRNA sequence matching with "
cuaaggaccuaacaaaguu
"
Human Coxsackievirus [CV]
" Virus reference Genome sequences
Browse all the records for "
Human Coxsackievirus [CV]
" virus
Browse "
virsi1811
" record
Length:
19
GC Content:
37 %
Starting position:
6314
Strain of Virus:
CBV3
GenBank Acc:
M33854
Transfection Reagent:
Lipofectin
Incubation Time (Hours):
48
Offtargets for "
cuaaggaccuaacaaaguu
" siRNA in Human Genome sequences
See
M33854
at Genbank
Pubmed:
19553393
Article:
Inhibition of coxsackievirus B3 and related enteroviruses by antiviral short interfering RNA pools produced using phi6 RNA-dependent RNA polymerase.
Authors:
Nygårdas M, Vuorinen T, Aalto AP, Bamford DH, Hukkanen V.
Journal:
J Gen Virol. 2009 Oct;90(Pt 10):2468-73. Epub 2009 Jun 24.
Entrez:
19553393
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm