VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
virsi1837
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1837
uuacucgcugaagcuggua
Human Coxsackievirus [CV]
Rev
COS-7
Protein
59
17112603
Blast
SL
refseqs
     
siRNA sequence "
uuacucgcugaagcuggua
" alignment with "
Human Coxsackievirus [CV]
" virus reference Genome sequences
siRNA sequence matching with "
uuacucgcugaagcuggua
"
Human Coxsackievirus [CV]
" Virus reference Genome sequences
Browse all the records for "
Human Coxsackievirus [CV]
" virus
Browse "
virsi1837
" record
Length:
19
GC Content:
47 %
Starting position:
6937
Strain of Virus:
B3
GenBank Acc:
M33854
Transfection Reagent:
Lipofectamine 2000
Incubation Time (Hours):
24
Offtargets for "
uuacucgcugaagcuggua
" siRNA in Human Genome sequences
See
M33854
at Genbank
Pubmed:
17112603
Article:
Strand-specific silencing of a picornavirus by RNA interference: evidence for the superiority of plus-strand specific siRNAs.
Authors:
Schubert S, Rothe D, Werk D, Grunert HP, Zeichhardt H, Erdmann VA, Kurreck J.
Journal:
Antiviral Res. 2007 Mar;73(3):197-205. Epub 2006 Nov 2.
Entrez:
17112603
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm