VIRsiRNAdb
Database of Viral siRNA / shRNA
Home
Search
Advance Search
Browse
By Family
By Virus
Gene
Pubmed
VIRsiID
EscapeDb
Tools
siTarAlign
siRNAmap
VIRsiblast
Submit
About
Database
Tools
Search
Browse
Team
Contact
Browse BY
Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
virsi2150
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi2150
ggagaugaaggcgaaggcguc
Hepatitis C Virus [HCV]
NS5B
Huh-7
mRNA
High
12594341
Blast
SL
refseqs
     
siRNA sequence "
ggagaugaaggcgaaggcguc
" alignment with "
Hepatitis C Virus [HCV]
" virus reference Genome sequences
siRNA sequence matching with "
ggagaugaaggcgaaggcguc
"
Hepatitis C Virus [HCV]
" Virus reference Genome sequences
Browse all the records for "
Hepatitis C Virus [HCV]
" virus
Browse "
virsi2150
" record
Length:
21
GC Content:
62 %
GenBank Acc:
nM_005922
Transfection Reagent:
Lipofectamine 2000
Incubation Time (Hours):
72
Offtargets for "
ggagaugaaggcgaaggcguc
" siRNA in Human Genome sequences
See
nM_005922
at Genbank
Pubmed:
12594341
Article:
RNA interference blocks gene expression and RNA synthesis from hepatitis C replicons propagated in human liver cells.
Authors:
Wilson JA, Jayasena S, Khvorova A, Sabatinos S, Rodrigue-Gervais IG, Arya S, Sarangi F, Harris-Brandts M, Beaulieu S, Richardson CD.
Journal:
Proc Natl Acad Sci U S A. 2003 Mar 4;100(5):2783-8. Epub 2003 Feb 19.
Entrez:
12594341
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm