VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
16865275
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1860
ccucuccucuuccauaggc
Epstein-Barr Virus [EBV]
LMP1
C666-1
RNA
High
16865275
Blast
SL
refseqs
     
siRNA sequence "
ccucuccucuuccauaggc
" alignment with "
Epstein-Barr Virus [EBV]
" virus reference Genome sequences
siRNA sequence matching with "
ccucuccucuuccauaggc
"
Epstein-Barr Virus [EBV]
" Virus reference Genome sequences
Browse all the records for "
Epstein-Barr Virus [EBV]
" virus
Browse "
virsi1860
" record
Length:
19
GC Content:
58 %
Starting position:
612
GenBank Acc:
X66863
Incubation Time (Hours):
60
Offtargets for "
ccucuccucuuccauaggc
" siRNA in Human Genome sequences
See
X66863
at Genbank
Pubmed:
16865275
Article:
Recombinant adeno-associated virus mediated RNA interference inhibits metastasis of nasopharyngeal cancer cells in vivo and in vitro by suppression of Epstein-Barr virus encoded LMP-1.
Authors:
Li X, Liu X, Li CY, Ding Y, Chau D, Li G, Kung HF, Lin MC, Peng Y.
Journal:
Int J Oncol. 2006 Sep;29(3):595-603.
Entrez:
16865275
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm