VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
18685862
are
2
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1675
caucacaucaggauuccua
Hepatitis B Virus [HBV]
S
HepG2.2.15
RNA
81
18685862
Blast
SL
refseqs
     
siRNA sequence "
caucacaucaggauuccua
" alignment with "
Hepatitis B Virus [HBV]
" virus reference Genome sequences
siRNA sequence matching with "
caucacaucaggauuccua
"
Hepatitis B Virus [HBV]
" Virus reference Genome sequences
Browse all the records for "
Hepatitis B Virus [HBV]
" virus
Browse "
virsi1675
" record
Length:
19
GC Content:
42 %
Starting position:
163
GenBank Acc:
FR714498
Transfection Reagent:
Lipofectamine 2000
Incubation Time (Hours):
48
Offtargets for "
caucacaucaggauuccua
" siRNA in Human Genome sequences
See
FR714498
at Genbank
Pubmed:
18685862
Article:
Inhibition of hepatitis B virus replication by small interference RNA induces expression of MICA in HepG2.2.15 cells.
Authors:
Tang KF, Chen M, Xie J, Song GB, Shi YS, Liu Q, Mei ZC, Steinle A, Ren H.
Journal:
Med Microbiol Immunol. 2009 Feb;198(1):27-32. Epub 2008 Aug 7.
Entrez:
18685862
virsi1676
ucucgggaaucucaauguu
Hepatitis B Virus [HBV]
C
HepG2.2.15
RNA
67
18685862
Blast
SL
refseqs
     
siRNA sequence "
ucucgggaaucucaauguu
" alignment with "
Hepatitis B Virus [HBV]
" virus reference Genome sequences
siRNA sequence matching with "
ucucgggaaucucaauguu
"
Hepatitis B Virus [HBV]
" Virus reference Genome sequences
Browse all the records for "
Hepatitis B Virus [HBV]
" virus
Browse "
virsi1676
" record
Length:
19
GC Content:
42 %
Starting position:
2432
GenBank Acc:
FR714498
Transfection Reagent:
Lipofectamine 2000
Incubation Time (Hours):
48
Offtargets for "
ucucgggaaucucaauguu
" siRNA in Human Genome sequences
See
FR714498
at Genbank
Pubmed:
18685862
Article:
Inhibition of hepatitis B virus replication by small interference RNA induces expression of MICA in HepG2.2.15 cells.
Authors:
Tang KF, Chen M, Xie J, Song GB, Shi YS, Liu Q, Mei ZC, Steinle A, Ren H.
Journal:
Med Microbiol Immunol. 2009 Feb;198(1):27-32. Epub 2008 Aug 7.
Entrez:
18685862
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm