VIRsiRNAdb

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Total number of Results for ORF-C are 3
Results from 0 - 25

siRNA sequence "gauccagcaucuagagacc" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "gauccagcaucuagagacc" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi2284 " record
Length: 19
GC Content:53 %
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: siPORT
Incubation Time (Hours):24

Offtargets for "gauccagcaucuagagacc" siRNA in Human Genome sequences
See U95551 at Genbank
Pubmed:17926641
Article:The short hairpin RNA driven by polymerase II suppresses both wild-type and lamivudine-resistant hepatitis B virus strains.
Authors:Ren GL, Fang Y, Ma HH, Lei YF, Wang D, Xu MC, Wang PZ, Huang CX, Nie OH, Sun YT, Bai XF.
Journal:Antivir Ther. 2007;12(6):865-76.
Entrez:17926641

siRNA sequence "ugacucuagcuaccugggu" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "ugacucuagcuaccugggu" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi2285 " record
Length: 19
GC Content:53 %
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: siPORT
Incubation Time (Hours):24

Offtargets for "ugacucuagcuaccugggu" siRNA in Human Genome sequences
See U95551 at Genbank
Pubmed:17926641
Article:The short hairpin RNA driven by polymerase II suppresses both wild-type and lamivudine-resistant hepatitis B virus strains.
Authors:Ren GL, Fang Y, Ma HH, Lei YF, Wang D, Xu MC, Wang PZ, Huang CX, Nie OH, Sun YT, Bai XF.
Journal:Antivir Ther. 2007;12(6):865-76.
Entrez:17926641

siRNA sequence "cuaaugacucuagcuaccu" alignment with "Hepatitis B Virus [HBV]" virus reference Genome sequences
siRNA sequence matching with "cuaaugacucuagcuaccu" Hepatitis B Virus [HBV]" Virus reference Genome sequences
Browse all the records for "Hepatitis B Virus [HBV]" virus
Browse "virsi2286 " record
Length: 19
GC Content:42 %
Strain of Virus: ayw
GenBank Acc: U95551
Transfection Reagent: siPORTxp-1
Incubation Time (Hours):24

Offtargets for "cuaaugacucuagcuaccu" siRNA in Human Genome sequences
See U95551 at Genbank
Pubmed:17926641
Article:The short hairpin RNA driven by polymerase II suppresses both wild-type and lamivudine-resistant hepatitis B virus strains.
Authors:Ren GL, Fang Y, Ma HH, Lei YF, Wang D, Xu MC, Wang PZ, Huang CX, Nie OH, Sun YT, Bai XF.
Journal:Antivir Ther. 2007;12(6):865-76.
Entrez:17926641


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi2284	gauccagcaucuagagacc	Hepatitis B Virus [HBV]	ORF-C	HepG2.2.15	Protein	Medium	17926641	Blast SL	refseqs
virsi2285	ugacucuagcuaccugggu	Hepatitis B Virus [HBV]	ORF-C	HepG2.2.15	Protein	88	17926641	Blast SL	refseqs
virsi2286	cuaaugacucuagcuaccu	Hepatitis B Virus [HBV]	ORF-C	HepG2.2.15	Protein	79	17926641	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm