VIRsiRNAdb

Predicted off-targets seeds for siRNA "gugaacgcccaccgaaugu" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1021.
Total Genes with multiple seed matches: 53.
Genes with at least one seed match: NM_000081 NM_000104 NM_000131 NM_000135 NM_000163 NM_000192 NM_000220 NM_000275 NM_000303 NM_000335 NM_000406 NM_000410 NM_000439 NM_000441 NM_000450 NM_000476 NM_000577 NM_000603 NM_000633 NM_000640 NM_000663 NM_000692 NM_000734 NM_000744 NM_000749 NM_000761 NM_000821 NM_000844 NM_000867 NM_000870 NM_000887 NM_000891 NM_000907 NM_000910 NM_000963 NM_001001323 NM_001001331 NM_001001419 NM_001001420 NM_001001557 NM_001001671 NM_001001677 NM_001001891 NM_001001928 NM_001001929 NM_001001930 NM_001001991 NM_001002762 NM_001002847 NM_001003652 NM_001003937 NM_001004106 NM_001004298 NM_001004306 NM_001004330 NM_001004345 NM_001005387 NM_001006633 NM_001006657 NM_001006932 NM_001007075 NM_001007262 NM_001007269 NM_001007270 NM_001008226 NM_001008234 NM_001008272 NM_001008273 NM_001008392 NM_001008541 NM_001008777 NM_001008860 NM_001008892 NM_001008894 NM_001008895 NM_001009909 NM_001009938 NM_001009956 NM_001009960 NM_001010861 NM_001010911 NM_001010913 NM_001010915 NM_001012264 NM_001012320 NM_001012715 NM_001012733 NM_001012734 NM_001012763 NM_001012958 NM_001012969 NM_001013640 NM_001013652 NM_001013677 NM_001013682 NM_001013698 NM_001014283 NM_001014380 NM_001014797 NM_001015047 NM_001015051 NM_001017371 NM_001018065 NM_001018066 NM_001018100 NM_001018101 NM_001023563 NM_001023565 NM_001024630 NM_001024843 NM_001024855 NM_001025233 NM_001036 NM_001044 NM_001046 NM_001049 NM_001080 NM_001112 NM_001125 NM_001127 NM_001148 NM_001177 NM_001248 NM_001260 NM_001279 NM_001348 NM_001364 NM_001400 NM_001415 NM_001432 NM_001440 NM_001465 NM_001481 NM_001491 NM_001512 NM_001532 NM_001537 NM_001547 NM_001682 NM_001683 NM_001696 NM_001709 NM_001719 NM_001734 NM_001896 NM_001901 NM_001902 NM_001950 NM_001969 NM_001993 NM_002052 NM_002082 NM_002103 NM_002128 NM_002130 NM_002180 NM_002193 NM_002239 NM_002265 NM_002304 NM_002318 NM_002376 NM_002402 NM_002417 NM_002463 NM_002531 NM_002581 NM_002628 NM_002629 NM_002666 NM_002716 NM_002725 NM_002799 NM_002829 NM_002843 NM_002852 NM_002866 NM_002941 NM_002957 NM_002960 NM_002975 NM_003015 NM_003027 NM_003029 NM_003044 NM_003108 NM_003111 NM_003113 NM_003204 NM_003217 NM_003223 NM_003256 NM_003262 NM_003304 NM_003347 NM_003373 NM_003420 NM_003431 NM_003435 NM_003466 NM_003564 NM_003589 NM_003590 NM_003602 NM_003605 NM_003644 NM_003685 NM_003734 NM_003789 NM_003790 NM_003803 NM_003855 NM_003877 NM_003899 NM_003916 NM_003953 NM_003959 NM_004035 NM_004095 NM_004098 NM_004107 NM_004132 NM_004136 NM_004208 NM_004237 NM_004271 NM_004311 NM_004316 NM_004348 NM_004385 NM_004388 NM_004392 NM_004463 NM_004529 NM_004545 NM_004561 NM_004599 NM_004612 NM_004619 NM_004624 NM_004663 NM_004697 NM_004707 NM_004717 NM_004745 NM_004772 NM_004791 NM_004796 NM_004874 NM_004921 NM_004947 NM_004948 NM_004995 NM_005003 NM_005036 NM_005054 NM_005063 NM_005072 NM_005088 NM_005093 NM_005142 NM_005157 NM_005191 NM_005228 NM_005245 NM_005277 NM_005312 NM_005347 NM_005399 NM_005416 NM_005436 NM_005467 NM_005475 NM_005482 NM_005494 NM_005540 NM_005555 NM_005582 NM_005593 NM_005618 NM_005627 NM_005658 NM_005669 NM_005682 NM_005730 NM_005737 NM_005765 NM_005808 NM_005844 NM_005876 NM_005901 NM_005902 NM_005903 NM_005962 NM_005966 NM_006007 NM_006011 NM_006021 NM_006054 NM_006096 NM_006105 NM_006141 NM_006148 NM_006206 NM_006210 NM_006306 NM_006312 NM_006313 NM_006322 NM_006375 NM_006424 NM_006465 NM_006526 NM_006546 NM_006555 NM_006563 NM_006593 NM_006608 NM_006622 NM_006669 NM_006695 NM_006707 NM_006729 NM_006738 NM_006748 NM_006762 NM_006772 NM_006822 NM_006852 NM_006873 NM_006888 NM_006908 NM_006931 NM_006990 NM_006997 NM_007036 NM_007083 NM_007145 NM_007148 NM_007175 NM_007200 NM_007292 NM_007313 NM_007315 NM_007353 NM_007375 NM_012097 NM_012137 NM_012180 NM_012215 NM_012247 NM_012266 NM_012301 NM_012309 NM_012323 NM_012464 NM_013259 NM_013261 NM_013286 NM_013302 NM_013308 NM_013374 NM_013377 NM_013386 NM_013951 NM_013952 NM_013953 NM_013992 NM_014000 NM_014023 NM_014112 NM_014285 NM_014286 NM_014333 NM_014351 NM_014480 NM_014521 NM_014570 NM_014615 NM_014629 NM_014635 NM_014661 NM_014690 NM_014761 NM_014792 NM_014850 NM_014860 NM_014864 NM_014879 NM_014906 NM_014910 NM_014919 NM_014926 NM_014935 NM_014954 NM_015045 NM_015047 NM_015066 NM_015088 NM_015124 NM_015141 NM_015192 NM_015199 NM_015216 NM_015224 NM_015226 NM_015233 NM_015252 NM_015278 NM_015409 NM_015426 NM_015430 NM_015458 NM_015550 NM_015560 NM_015635 NM_015655 NM_015683 NM_015686 NM_015833 NM_015855 NM_015990 NM_015995 NM_016002 NM_016024 NM_016047 NM_016074 NM_016166 NM_016206 NM_016218 NM_016224 NM_016279 NM_016285 NM_016335 NM_016348 NM_016376 NM_016389 NM_016412 NM_016426 NM_016442 NM_016463 NM_016564 NM_016571 NM_016626 NM_016936 NM_017410 NM_017577 NM_017637 NM_017644 NM_017664 NM_017705 NM_017728 NM_017776 NM_017799 NM_017804 NM_017877 NM_017953 NM_017968 NM_018029 NM_018059 NM_018084 NM_018108 NM_018115 NM_018130 NM_018153 NM_018185 NM_018227 NM_018243 NM_018246 NM_018247 NM_018316 NM_018325 NM_018332 NM_018340 NM_018381 NM_018416 NM_018440 NM_018443 NM_018660 NM_018669 NM_018890 NM_018941 NM_018976 NM_018984 NM_019001 NM_019069 NM_019072 NM_019094 NM_019106 NM_019607 NM_019616 NM_020037 NM_020038 NM_020123 NM_020133 NM_020178 NM_020310 NM_020374 NM_020416 NM_020546 NM_020639 NM_020648 NM_020686 NM_020714 NM_020727 NM_020762 NM_020777 NM_020779 NM_020781 NM_020802 NM_020824 NM_020850 NM_020859 NM_020888 NM_020909 NM_020927 NM_020947 NM_020956 NM_020977 NM_021008 NM_021076 NM_021116 NM_021135 NM_021818 NM_021931 NM_021943 NM_022102 NM_022103 NM_022131 NM_022336 NM_022373 NM_022468 NM_022473 NM_022753 NM_022770 NM_022779 NM_022803 NM_022828 NM_022835 NM_022897 NM_022898 NM_022912 NM_024017 NM_024034 NM_024421 NM_024569 NM_024594 NM_024638 NM_024646 NM_024656 NM_024674 NM_024691 NM_024707 NM_024738 NM_024749 NM_024773 NM_024785 NM_024803 NM_024807 NM_024893 NM_024902 NM_024909 NM_024910 NM_024911 NM_024917 NM_024958 NM_025059 NM_025195 NM_025208 NM_030569 NM_030621 NM_030627 NM_030641 NM_030772 NM_030781 NM_030914 NM_030922 NM_030961 NM_030964 NM_030971 NM_031423 NM_031448 NM_031483 NM_031886 NM_031898 NM_031905 NM_031911 NM_032012 NM_032116 NM_032153 NM_032221 NM_032255 NM_032276 NM_032294 NM_032302 NM_032329 NM_032354 NM_032369 NM_032372 NM_032385 NM_032486 NM_032492 NM_032510 NM_032538 NM_032554 NM_032770 NM_032783 NM_032813 NM_032817 NM_032822 NM_032869 NM_032876 NM_032906 NM_033100 NM_033116 NM_033120 NM_033135 NM_033161 NM_033211 NM_033239 NM_033240 NM_033242 NM_033244 NM_033245 NM_033247 NM_033250 NM_033262 NM_033389 NM_033397 NM_033401 NM_033426 NM_033631 NM_052831 NM_052832 NM_052851 NM_052861 NM_052876 NM_053024 NM_058170 NM_058181 NM_058197 NM_058219 NM_058240 NM_080551 NM_080574 NM_080661 NM_080671 NM_080678 NM_080717 NM_080737 NM_080759 NM_080760 NM_080836 NM_130439 NM_130446 NM_130469 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837 NM_133266 NM_133330 NM_133331 NM_133332 NM_133333 NM_133335 NM_133336 NM_133474 NM_133631 NM_133646 NM_138333 NM_138450 NM_138473 NM_138494 NM_138576 NM_138620 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138635 NM_138694 NM_138706 NM_138970 NM_139004 NM_139072 NM_139167 NM_139179 NM_139265 NM_144599 NM_144669 NM_144714 NM_144767 NM_145008 NM_145011 NM_145064 NM_145179 NM_145285 NM_145307 NM_145320 NM_145321 NM_145322 NM_145323 NM_145324 NM_145649 NM_145655 NM_145697 NM_145730 NM_145733 NM_145734 NM_145735 NM_145759 NM_145796 NM_145808 NM_145812 NM_145813 NM_148965 NM_148966 NM_148967 NM_148968 NM_148969 NM_148970 NM_148971 NM_148972 NM_148973 NM_148974 NM_152284 NM_152309 NM_152367 NM_152416 NM_152429 NM_152450 NM_152454 NM_152461 NM_152498 NM_152527 NM_152531 NM_152548 NM_152571 NM_152588 NM_152594 NM_152599 NM_152615 NM_152630 NM_152716 NM_152738 NM_152754 NM_152793 NM_152840 NM_152842 NM_152878 NM_153008 NM_153022 NM_153239 NM_153247 NM_153360 NM_153425 NM_153442 NM_153448 NM_153451 NM_153613 NM_153620 NM_153742 NM_153764 NM_153765 NM_153766 NM_153767 NM_153812 NM_170686 NM_170731 NM_170732 NM_170733 NM_170734 NM_170735 NM_170740 NM_171982 NM_172206 NM_172390 NM_173178 NM_173485 NM_173508 NM_173531 NM_173536 NM_173545 NM_173589 NM_173597 NM_173643 NM_173653 NM_173667 NM_173801 NM_173823 NM_173841 NM_173842 NM_173843 NM_174911 NM_175058 NM_175569 NM_175767 NM_175864 NM_175913 NM_176823 NM_176871 NM_176874 NM_177438 NM_177524 NM_177525 NM_177985 NM_178006 NM_178007 NM_178011 NM_178120 NM_178494 NM_178815 NM_181351 NM_181453 NM_181457 NM_181458 NM_181459 NM_181460 NM_181486 NM_181533 NM_181814 NM_181825 NM_181831 NM_181874 NM_181876 NM_182314 NM_182525 NM_182531 NM_182534 NM_182562 NM_182606 NM_182621 NM_182734 NM_182798 NM_182799 NM_182801 NM_182932 NM_182933 NM_182936 NM_183002 NM_183004 NM_183065 NM_183238 NM_183414 NM_194282 NM_194285 NM_194294 NM_194317 NM_194428 NM_194439 NM_197975 NM_198041 NM_198053 NM_198056 NM_198086 NM_198147 NM_198157 NM_198287 NM_198289 NM_198392 NM_198461 NM_198478 NM_198499 NM_198503 NM_198545 NM_198554 NM_198679 NM_198829 NM_198851 NM_198859 NM_199039 NM_199040 NM_199335 NM_199450 NM_199464 NM_199513 NM_201348 NM_201428 NM_201429 NM_201430 NM_201432 NM_201433 NM_201442 NM_201524 NM_201525 NM_201591 NM_201592 NM_201628 NM_203301 NM_203371 NM_203374 NM_203448 NM_203451 NM_205545 NM_205853 NM_206831 NM_206860 NM_206861 NM_206862 NM_206887 NM_206902 NM_207003 NM_207032 NM_207033 NM_207034 NM_207357 NM_207362 NM_207389 NM_207432 NM_207467 NM_207470 NM_207478 NM_213568 NM_213651 XM_032996 XM_035299 XM_039676 XM_046600 XM_047995 XM_055636 XM_117294 XM_166320 XM_208361 XM_209227 XM_209607 XM_211367 XM_212061 XM_291105 XM_291262 XM_294521 XM_351948 XM_370634 XM_370636 XM_370665 XM_371074 XM_371717 XM_371801 XM_372556 XM_373433 XM_373498 XM_374007 XM_374013 XM_374803 XM_375359 XM_375619 XM_375629 XM_375697 XM_376062 XM_376372 XM_376550 XM_376558 XM_376560 XM_376588 XM_376677 XM_376720 XM_376905 XM_378178 XM_378316 XM_378394 XM_378411 XM_378460 XM_378523 XM_378549 XM_378706 XM_378760 XM_378787 XM_378823 XM_378835 XM_378855 XM_378866 XM_378949 XM_378985 XM_379023 XM_379114 XM_379190 XM_379267 XM_379322 XM_379452 XM_379459 XM_379534 XM_379573 XM_379637 XM_379664 XM_379665 XM_379800 XM_379840 XM_379851 XM_379931 XM_379967 XM_380159 XM_495909 XM_495918 XM_496028 XM_496549 XM_496581 XM_496654 XM_496661 XM_496749 XM_498435 XM_498469 XM_498648 XM_498706 XM_498774 XM_498861 XM_498878 XM_498894 XM_498917 XM_499117 XM_499131 XM_499182 XM_499185 XM_499392 XM_499564 XR_000167 XR_000265	Genes with multiple seed matches: NM_001002762 NM_001012320 NM_001012733 NM_001012734 NM_001014283 NM_001024843 NM_001537 NM_003605 NM_004745 NM_005054 NM_006322 NM_006822 NM_006931 NM_013286 NM_014850 NM_014906 NM_014919 NM_015088 NM_015124 NM_015192 NM_016002 NM_018185 NM_018443 NM_018984 NM_020133 NM_020762 NM_020909 NM_022898 NM_024674 NM_024785 NM_030627 NM_031886 NM_032294 NM_032329 NM_080737 NM_133330 NM_133331 NM_133332 NM_133333 NM_133335 NM_138576 NM_152450 NM_152461 NM_153451 NM_172206 NM_173536 NM_181351 NM_182734 NM_183414 NM_194439 XM_166320 XM_498917 XM_499182

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA