VIRsiRNAdb

Predicted off-targets seeds for siRNA "gaacaaacaaacagcgaugaa" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1006.
Total Genes with multiple seed matches: 37.
Genes with at least one seed match: NM_000038 NM_000061 NM_000068 NM_000109 NM_000134 NM_000135 NM_000189 NM_000206 NM_000210 NM_000222 NM_000226 NM_000276 NM_000292 NM_000332 NM_000418 NM_000446 NM_000450 NM_000451 NM_000529 NM_000544 NM_000555 NM_000557 NM_000569 NM_000570 NM_000595 NM_000599 NM_000634 NM_000648 NM_000685 NM_000702 NM_000750 NM_000774 NM_000809 NM_000810 NM_000821 NM_000849 NM_000864 NM_000876 NM_000896 NM_000962 NM_000997 NM_001001331 NM_001001412 NM_001001419 NM_001001420 NM_001001434 NM_001001681 NM_001001686 NM_001001687 NM_001001924 NM_001001925 NM_001001927 NM_001001928 NM_001001929 NM_001001930 NM_001001931 NM_001004054 NM_001004321 NM_001004349 NM_001004416 NM_001005359 NM_001005364 NM_001005388 NM_001005404 NM_001005410 NM_001005411 NM_001007258 NM_001007271 NM_001007274 NM_001007275 NM_001008211 NM_001008212 NM_001008213 NM_001008408 NM_001008410 NM_001008493 NM_001008699 NM_001008800 NM_001008883 NM_001008925 NM_001009551 NM_001009553 NM_001009609 NM_001009610 NM_001009615 NM_001009820 NM_001009922 NM_001009956 NM_001010846 NM_001010866 NM_001010898 NM_001011655 NM_001012267 NM_001012733 NM_001012734 NM_001012958 NM_001012986 NM_001013438 NM_001013649 NM_001013673 NM_001013690 NM_001013697 NM_001013726 NM_001013839 NM_001015883 NM_001017396 NM_001017405 NM_001017970 NM_001018049 NM_001018061 NM_001018062 NM_001024611 NM_001024649 NM_001024676 NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025100 NM_001025101 NM_001037 NM_001066 NM_001080 NM_001082 NM_001105 NM_001131 NM_001132 NM_001204 NM_001222 NM_001256 NM_001271 NM_001310 NM_001334 NM_001340 NM_001398 NM_001419 NM_001491 NM_001518 NM_001537 NM_001548 NM_001587 NM_001606 NM_001609 NM_001659 NM_001660 NM_001677 NM_001683 NM_001718 NM_001744 NM_001746 NM_001802 NM_001830 NM_001879 NM_001945 NM_001963 NM_002019 NM_002025 NM_002055 NM_002200 NM_002239 NM_002268 NM_002357 NM_002384 NM_002385 NM_002390 NM_002408 NM_002414 NM_002507 NM_002522 NM_002571 NM_002609 NM_002623 NM_002634 NM_002676 NM_002714 NM_002731 NM_002744 NM_002775 NM_002789 NM_002833 NM_002857 NM_002898 NM_002956 NM_002998 NM_003020 NM_003025 NM_003155 NM_003185 NM_003217 NM_003238 NM_003247 NM_003455 NM_003492 NM_003502 NM_003588 NM_003612 NM_003629 NM_003633 NM_003644 NM_003657 NM_003722 NM_003764 NM_003799 NM_003808 NM_003862 NM_003885 NM_003930 NM_003981 NM_004006 NM_004007 NM_004009 NM_004010 NM_004011 NM_004012 NM_004013 NM_004014 NM_004015 NM_004016 NM_004017 NM_004018 NM_004020 NM_004021 NM_004022 NM_004023 NM_004117 NM_004137 NM_004233 NM_004235 NM_004293 NM_004382 NM_004523 NM_004535 NM_004580 NM_004588 NM_004593 NM_004621 NM_004711 NM_004737 NM_004745 NM_004772 NM_004776 NM_004805 NM_004834 NM_004835 NM_004863 NM_004905 NM_004913 NM_004914 NM_004936 NM_004941 NM_005010 NM_005036 NM_005046 NM_005096 NM_005188 NM_005197 NM_005206 NM_005264 NM_005276 NM_005324 NM_005426 NM_005430 NM_005431 NM_005434 NM_005506 NM_005570 NM_005596 NM_005634 NM_005647 NM_005650 NM_005665 NM_005687 NM_005716 NM_005736 NM_005756 NM_005776 NM_005882 NM_005883 NM_005902 NM_005903 NM_005907 NM_005910 NM_005965 NM_005998 NM_006037 NM_006043 NM_006065 NM_006122 NM_006198 NM_006262 NM_006306 NM_006323 NM_006361 NM_006389 NM_006465 NM_006504 NM_006538 NM_006549 NM_006624 NM_006628 NM_006643 NM_006669 NM_006670 NM_006688 NM_006711 NM_006773 NM_006780 NM_006788 NM_006868 NM_006876 NM_006887 NM_006888 NM_006930 NM_006936 NM_006989 NM_006999 NM_007050 NM_007055 NM_007066 NM_007069 NM_007117 NM_007148 NM_007203 NM_007208 NM_007227 NM_007243 NM_007249 NM_007257 NM_007321 NM_007323 NM_007350 NM_007353 NM_007371 NM_009585 NM_012137 NM_012156 NM_012232 NM_012296 NM_012388 NM_012413 NM_012463 NM_012479 NM_013286 NM_013345 NM_013351 NM_013361 NM_013382 NM_014043 NM_014220 NM_014235 NM_014279 NM_014310 NM_014331 NM_014344 NM_014386 NM_014397 NM_014399 NM_014427 NM_014488 NM_014507 NM_014636 NM_014644 NM_014656 NM_014667 NM_014724 NM_014728 NM_014732 NM_014758 NM_014765 NM_014792 NM_014804 NM_014805 NM_014807 NM_014821 NM_014829 NM_014851 NM_014867 NM_014910 NM_014912 NM_014923 NM_014934 NM_014936 NM_014940 NM_014948 NM_014964 NM_015035 NM_015064 NM_015082 NM_015090 NM_015113 NM_015124 NM_015155 NM_015191 NM_015213 NM_015219 NM_015254 NM_015299 NM_015310 NM_015367 NM_015409 NM_015419 NM_015436 NM_015488 NM_015545 NM_015554 NM_015610 NM_015683 NM_015691 NM_015696 NM_015844 NM_015846 NM_015847 NM_015865 NM_015909 NM_015922 NM_015928 NM_015949 NM_015954 NM_015981 NM_015994 NM_016003 NM_016018 NM_016023 NM_016118 NM_016138 NM_016235 NM_016263 NM_016270 NM_016389 NM_016390 NM_016399 NM_016474 NM_016526 NM_016538 NM_016559 NM_016570 NM_016589 NM_016592 NM_016647 NM_016834 NM_016835 NM_016841 NM_017542 NM_017575 NM_017588 NM_017590 NM_017594 NM_017631 NM_017644 NM_017656 NM_017704 NM_017723 NM_017732 NM_017766 NM_017770 NM_017787 NM_017873 NM_017927 NM_017939 NM_017970 NM_017991 NM_017999 NM_018008 NM_018010 NM_018091 NM_018110 NM_018166 NM_018185 NM_018193 NM_018212 NM_018224 NM_018234 NM_018235 NM_018265 NM_018273 NM_018332 NM_018584 NM_018658 NM_018952 NM_019009 NM_019087 NM_019094 NM_019110 NM_019555 NM_020038 NM_020119 NM_020170 NM_020182 NM_020203 NM_020219 NM_020223 NM_020315 NM_020326 NM_020335 NM_020429 NM_020440 NM_020462 NM_020640 NM_020654 NM_020661 NM_020713 NM_020724 NM_020738 NM_020742 NM_020749 NM_020774 NM_020777 NM_020800 NM_020808 NM_020914 NM_020957 NM_020997 NM_021036 NM_021088 NM_021090 NM_021116 NM_021255 NM_021257 NM_021267 NM_021612 NM_021927 NM_021945 NM_021961 NM_021964 NM_021977 NM_021980 NM_022042 NM_022062 NM_022083 NM_022114 NM_022128 NM_022166 NM_022369 NM_022437 NM_022449 NM_022473 NM_022557 NM_022572 NM_022754 NM_022755 NM_022836 NM_023032 NM_023938 NM_024029 NM_024052 NM_024072 NM_024076 NM_024419 NM_024625 NM_024627 NM_024630 NM_024646 NM_024653 NM_024666 NM_024667 NM_024779 NM_024800 NM_024835 NM_024865 NM_024889 NM_024933 NM_024935 NM_024974 NM_025080 NM_025132 NM_025161 NM_025197 NM_025203 NM_025218 NM_025219 NM_025225 NM_030569 NM_030576 NM_030634 NM_030763 NM_030766 NM_030796 NM_030809 NM_030964 NM_030965 NM_031211 NM_031265 NM_031453 NM_031476 NM_031478 NM_031850 NM_031890 NM_031912 NM_031961 NM_032049 NM_032208 NM_032239 NM_032255 NM_032289 NM_032294 NM_032317 NM_032329 NM_032352 NM_032505 NM_032529 NM_032569 NM_032622 NM_032643 NM_032646 NM_032689 NM_032727 NM_032728 NM_032780 NM_032817 NM_032826 NM_032839 NM_032853 NM_032861 NM_032878 NM_032898 NM_032976 NM_032999 NM_033000 NM_033001 NM_033103 NM_033111 NM_033282 NM_033346 NM_033357 NM_033364 NM_033389 NM_033393 NM_033397 NM_033420 NM_033426 NM_033514 NM_033649 NM_033661 NM_052821 NM_052861 NM_052869 NM_052896 NM_052904 NM_052957 NM_052962 NM_052966 NM_053023 NM_053025 NM_053026 NM_053027 NM_053028 NM_053029 NM_053030 NM_053031 NM_053032 NM_053055 NM_053056 NM_078483 NM_078487 NM_080491 NM_080591 NM_080594 NM_080605 NM_080625 NM_080656 NM_080928 NM_130435 NM_133170 NM_133460 NM_133642 NM_133646 NM_138278 NM_138295 NM_138390 NM_138399 NM_138415 NM_138440 NM_138499 NM_138608 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138640 NM_138699 NM_138770 NM_139062 NM_139068 NM_139069 NM_139265 NM_139275 NM_139277 NM_139279 NM_144599 NM_144603 NM_144622 NM_144641 NM_144649 NM_144667 NM_144984 NM_145034 NM_145188 NM_145189 NM_145286 NM_145293 NM_145304 NM_145323 NM_145324 NM_145646 NM_145649 NM_145655 NM_145686 NM_145687 NM_145693 NM_145793 NM_145804 NM_145913 NM_147150 NM_148921 NM_152237 NM_152267 NM_152274 NM_152281 NM_152306 NM_152334 NM_152362 NM_152371 NM_152374 NM_152384 NM_152391 NM_152416 NM_152434 NM_152470 NM_152482 NM_152558 NM_152608 NM_152655 NM_152658 NM_152686 NM_152734 NM_152760 NM_153013 NM_153026 NM_153050 NM_153051 NM_153191 NM_153266 NM_153376 NM_153451 NM_153462 NM_153463 NM_153499 NM_153500 NM_153611 NM_153636 NM_153683 NM_153705 NM_153746 NM_153810 NM_156036 NM_156037 NM_170609 NM_170740 NM_170741 NM_170742 NM_171825 NM_172087 NM_172088 NM_172089 NM_172169 NM_172170 NM_172171 NM_172172 NM_172173 NM_172206 NM_172216 NM_172226 NM_173467 NM_173509 NM_173551 NM_173568 NM_173583 NM_173597 NM_173642 NM_173651 NM_173669 NM_173676 NM_173677 NM_173681 NM_173687 NM_174892 NM_175575 NM_175892 NM_175900 NM_176095 NM_176853 NM_177453 NM_177996 NM_177999 NM_178037 NM_178038 NM_178151 NM_178152 NM_178153 NM_178314 NM_178483 NM_178556 NM_178565 NM_178579 NM_178816 NM_178836 NM_181050 NM_181309 NM_181310 NM_181332 NM_181349 NM_181492 NM_181654 NM_181709 NM_181740 NM_181789 NM_181804 NM_181805 NM_182498 NM_182501 NM_182513 NM_182518 NM_182554 NM_182740 NM_182831 NM_182915 NM_182919 NM_182948 NM_183234 NM_183235 NM_183236 NM_194287 NM_194317 NM_197941 NM_198240 NM_198271 NM_198432 NM_198537 NM_198541 NM_198576 NM_198859 NM_198939 NM_198968 NM_199040 NM_199043 NM_199045 NM_199126 NM_199169 NM_199170 NM_199171 NM_199175 NM_199176 NM_199182 NM_199355 NM_199413 NM_199414 NM_199415 NM_199454 NM_199461 NM_201432 NM_201433 NM_201565 NM_201599 NM_201628 NM_201634 NM_202467 NM_202468 NM_202469 NM_202470 NM_202494 NM_203364 NM_203426 NM_203453 NM_206834 NM_206963 NM_207003 NM_207006 NM_207009 NM_207310 NM_207333 NM_207368 NM_207390 NM_207447 NM_207453 NM_207470 NM_207480 NM_207506 NM_207644 NM_212467 NM_212533 NM_212558 NM_213613 XM_039676 XM_047610 XM_057107 XM_059037 XM_059689 XM_061890 XM_062872 XM_085151 XM_114415 XM_117117 XM_168053 XM_173083 XM_208522 XM_290502 XM_290670 XM_291019 XM_291105 XM_292820 XM_295155 XM_371141 XM_371254 XM_371461 XM_371778 XM_371783 XM_371820 XM_371891 XM_371956 XM_372198 XM_372233 XM_372267 XM_372584 XM_373500 XM_373704 XM_373749 XM_373765 XM_373950 XM_374013 XM_374145 XM_374422 XM_374877 XM_374915 XM_375042 XM_375292 XM_375373 XM_376018 XM_376212 XM_376412 XM_376586 XM_376602 XM_376658 XM_378546 XM_378550 XM_378608 XM_378703 XM_378708 XM_378787 XM_378798 XM_378859 XM_378908 XM_378971 XM_379030 XM_379108 XM_379214 XM_379234 XM_379249 XM_379320 XM_379363 XM_379391 XM_379434 XM_379459 XM_379512 XM_379595 XM_379637 XM_379798 XM_379820 XM_379897 XM_379932 XM_380135 XM_495891 XM_496134 XM_496191 XM_496231 XM_496328 XM_496351 XM_496644 XM_498434 XM_498440 XM_498457 XM_498466 XM_498508 XM_498569 XM_498572 XM_498877 XM_498972 XM_498996 XM_499056 XM_499147 XM_499182 XM_499496 XM_499503 XM_499563 XM_499570 XM_499586 XM_499596 XR_000167 XR_000190 XR_000195 XR_000216 XR_000261 XR_000292	Genes with multiple seed matches: NM_000849 NM_001001928 NM_001001929 NM_001001930 NM_001009820 NM_001013726 NM_002522 NM_003247 NM_004745 NM_004913 NM_005036 NM_006306 NM_006888 NM_015310 NM_017999 NM_018110 NM_032689 NM_032826 NM_033357 NM_033426 NM_053029 NM_139275 NM_145293 NM_145304 NM_153462 NM_153463 NM_153683 NM_181740 NM_194287 XM_290670 XM_371891 XM_374422 XM_375373 XM_376586 XM_379798 XM_496191 XM_499182

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA