VIRsiRNAdb

Predicted off-targets seeds for siRNA "agauacaauugucguuacu" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :681.
Total Genes with multiple seed matches: 15.
Genes with at least one seed match: NM_000021 NM_000244 NM_000332 NM_000333 NM_000336 NM_000376 NM_000405 NM_000417 NM_000451 NM_000462 NM_000522 NM_000604 NM_000618 NM_000647 NM_000720 NM_000743 NM_000750 NM_000795 NM_000814 NM_000818 NM_000902 NM_000913 NM_000945 NM_000961 NM_001001132 NM_001001336 NM_001001551 NM_001001690 NM_001001709 NM_001001789 NM_001001791 NM_001002909 NM_001002926 NM_001003800 NM_001004285 NM_001004286 NM_001004303 NM_001004315 NM_001004354 NM_001005375 NM_001005473 NM_001005502 NM_001005785 NM_001005786 NM_001005852 NM_001006113 NM_001006656 NM_001006933 NM_001006935 NM_001006936 NM_001006937 NM_001006938 NM_001006945 NM_001007098 NM_001007535 NM_001008493 NM_001009565 NM_001009877 NM_001009880 NM_001010846 NM_001010866 NM_001010909 NM_001010977 NM_001011537 NM_001011656 NM_001011657 NM_001011666 NM_001013633 NM_001013670 NM_001013676 NM_001013725 NM_001014434 NM_001015053 NM_001015877 NM_001017421 NM_001017535 NM_001017963 NM_001024460 NM_001024676 NM_001024808 NM_001024843 NM_001024948 NM_001101 NM_001174 NM_001280 NM_001390 NM_001414 NM_001415 NM_001490 NM_001534 NM_001613 NM_001616 NM_001650 NM_001742 NM_001874 NM_001891 NM_001934 NM_001949 NM_002020 NM_002065 NM_002074 NM_002099 NM_002103 NM_002253 NM_002259 NM_002334 NM_002340 NM_002376 NM_002424 NM_002442 NM_002617 NM_002639 NM_002670 NM_002857 NM_002938 NM_002956 NM_002972 NM_002998 NM_003030 NM_003037 NM_003052 NM_003091 NM_003108 NM_003188 NM_003200 NM_003288 NM_003369 NM_003392 NM_003412 NM_003479 NM_003506 NM_003574 NM_003629 NM_003672 NM_003913 NM_003945 NM_003983 NM_004028 NM_004081 NM_004096 NM_004237 NM_004272 NM_004342 NM_004373 NM_004402 NM_004430 NM_004450 NM_004473 NM_004475 NM_004575 NM_004621 NM_004711 NM_004745 NM_004758 NM_004804 NM_004904 NM_004955 NM_004965 NM_005020 NM_005124 NM_005207 NM_005348 NM_005354 NM_005437 NM_005474 NM_005475 NM_005491 NM_005536 NM_005539 NM_005559 NM_005563 NM_005575 NM_005647 NM_005663 NM_005670 NM_005883 NM_005986 NM_005999 NM_006054 NM_006055 NM_006096 NM_006177 NM_006386 NM_006492 NM_006517 NM_006609 NM_006614 NM_006665 NM_006775 NM_006822 NM_006857 NM_006868 NM_006876 NM_006884 NM_006926 NM_006931 NM_006999 NM_007014 NM_007030 NM_007052 NM_007123 NM_007129 NM_007236 NM_007249 NM_007260 NM_007275 NM_007287 NM_007288 NM_007289 NM_007306 NM_007328 NM_012151 NM_012156 NM_012227 NM_012306 NM_012310 NM_012325 NM_012343 NM_012384 NM_012408 NM_013261 NM_013385 NM_013423 NM_013427 NM_014001 NM_014012 NM_014015 NM_014016 NM_014034 NM_014065 NM_014112 NM_014147 NM_014155 NM_014211 NM_014212 NM_014246 NM_014268 NM_014300 NM_014333 NM_014354 NM_014550 NM_014569 NM_014613 NM_014647 NM_014667 NM_014677 NM_014747 NM_014755 NM_014760 NM_014859 NM_014919 NM_014937 NM_014947 NM_015009 NM_015025 NM_015044 NM_015063 NM_015074 NM_015088 NM_015129 NM_015137 NM_015140 NM_015227 NM_015250 NM_015254 NM_015264 NM_015265 NM_015278 NM_015428 NM_015457 NM_015470 NM_015651 NM_015692 NM_015719 NM_015833 NM_015834 NM_015850 NM_015886 NM_015947 NM_015978 NM_016002 NM_016067 NM_016121 NM_016133 NM_016170 NM_016224 NM_016240 NM_016271 NM_016332 NM_016410 NM_016467 NM_016574 NM_016613 NM_017425 NM_017555 NM_017694 NM_017737 NM_017799 NM_017809 NM_017858 NM_017896 NM_017927 NM_017933 NM_017936 NM_018023 NM_018024 NM_018098 NM_018141 NM_018181 NM_018182 NM_018212 NM_018227 NM_018324 NM_018366 NM_018372 NM_018479 NM_018482 NM_018590 NM_018639 NM_018700 NM_018711 NM_018847 NM_018951 NM_018995 NM_019044 NM_019081 NM_019094 NM_019594 NM_019618 NM_019842 NM_019894 NM_020177 NM_020204 NM_020208 NM_020310 NM_020342 NM_020348 NM_020363 NM_020364 NM_020398 NM_020420 NM_020424 NM_020462 NM_020673 NM_020774 NM_020828 NM_020866 NM_020921 NM_020940 NM_020993 NM_021127 NM_021192 NM_021729 NM_021813 NM_021912 NM_022053 NM_022085 NM_022346 NM_022405 NM_022469 NM_022493 NM_022663 NM_022736 NM_022756 NM_022780 NM_023105 NM_023106 NM_023109 NM_023111 NM_023924 NM_023936 NM_024076 NM_024334 NM_024563 NM_024593 NM_024636 NM_024685 NM_024704 NM_024742 NM_024745 NM_024772 NM_024795 NM_024836 NM_024863 NM_024913 NM_024940 NM_025154 NM_025208 NM_030574 NM_030766 NM_030767 NM_030786 NM_030791 NM_030810 NM_030815 NM_030881 NM_030913 NM_031451 NM_031910 NM_031954 NM_032041 NM_032121 NM_032131 NM_032144 NM_032276 NM_032288 NM_032296 NM_032389 NM_032441 NM_032445 NM_032446 NM_032458 NM_032714 NM_032818 NM_032843 NM_032844 NM_032926 NM_032932 NM_032946 NM_032975 NM_032980 NM_033100 NM_033135 NM_033138 NM_033139 NM_033140 NM_033152 NM_033153 NM_033154 NM_033155 NM_033157 NM_033224 NM_033389 NM_033397 NM_033658 NM_052842 NM_052847 NM_052851 NM_052875 NM_052879 NM_053029 NM_053046 NM_054111 NM_078483 NM_078625 NM_080625 NM_080657 NM_080725 NM_080732 NM_080832 NM_130446 NM_130799 NM_130800 NM_130801 NM_130802 NM_130803 NM_130804 NM_130838 NM_130839 NM_133330 NM_133331 NM_133332 NM_133333 NM_133335 NM_133336 NM_133634 NM_133635 NM_134444 NM_138281 NM_138350 NM_138450 NM_138479 NM_138619 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138639 NM_138640 NM_138722 NM_138723 NM_138775 NM_139072 NM_139279 NM_144591 NM_144653 NM_144974 NM_145102 NM_145232 NM_145234 NM_145257 NM_145263 NM_145311 NM_145331 NM_145332 NM_145333 NM_145794 NM_145795 NM_145799 NM_146388 NM_152287 NM_152387 NM_152409 NM_152451 NM_152484 NM_152655 NM_152673 NM_152771 NM_152902 NM_153026 NM_153031 NM_153033 NM_153038 NM_153231 NM_153332 NM_153343 NM_153365 NM_153442 NM_153683 NM_153715 NM_153818 NM_153836 NM_156036 NM_172241 NM_173470 NM_173528 NM_173536 NM_173552 NM_173571 NM_173572 NM_173629 NM_173681 NM_175892 NM_175902 NM_175907 NM_175920 NM_177968 NM_177996 NM_178006 NM_178007 NM_178470 NM_178566 NM_178568 NM_178832 NM_181489 NM_181502 NM_181643 NM_181704 NM_181787 NM_181900 NM_182481 NM_182482 NM_182484 NM_182554 NM_182621 NM_182647 NM_182898 NM_182899 NM_183047 NM_183048 NM_183238 NM_183247 NM_194434 NM_198128 NM_198201 NM_198240 NM_198320 NM_198330 NM_198515 NM_198989 NM_198993 NM_199040 NM_199047 NM_199054 NM_199126 NM_199188 NM_199190 NM_199339 NM_199359 NM_199360 NM_199361 NM_199362 NM_199363 NM_199424 NM_201264 NM_201428 NM_201429 NM_203399 NM_203401 NM_203446 NM_203459 NM_207003 NM_207333 NM_207405 NM_207412 NM_207434 NM_207446 NM_207451 NM_207581 NM_213568 NM_213657 NM_213658 XM_027307 XM_031689 XM_037557 XM_041126 XM_058931 XM_069842 XM_087353 XM_113947 XM_117294 XM_173083 XM_290925 XM_294450 XM_294854 XM_294910 XM_370849 XM_371542 XM_371558 XM_371691 XM_371760 XM_372039 XM_372097 XM_372420 XM_373030 XM_373704 XM_373889 XM_374013 XM_374086 XM_375357 XM_375491 XM_375912 XM_376165 XM_376269 XM_376278 XM_376905 XM_377742 XM_378372 XM_378517 XM_378730 XM_378970 XM_379069 XM_379099 XM_379154 XM_379215 XM_379275 XM_379395 XM_379547 XM_380042 XM_495844 XM_495849 XM_495939 XM_496143 XM_496145 XM_496367 XM_496543 XM_497089 XM_498469 XM_498614 XM_498666 XM_498687 XM_498688 XM_498698 XM_498705 XM_498729 XM_498828 XM_498835 XM_498977 XM_498988 XM_499008 XM_499055 XM_499063 XM_499130 XM_499177 XM_499301 XM_499500 XM_499512 XR_000261 XR_000292	Genes with multiple seed matches: NM_001024808 NM_001024843 NM_004745 NM_005539 NM_007249 NM_014947 NM_015088 NM_020774 NM_020993 NM_024913 NM_033389 NM_153031 XM_375357 XM_496143 XM_497089

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA