VIRsiRNAdb

Predicted off-targets seeds for siRNA "aucuguucucuaaacgaac" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1365.
Total Genes with multiple seed matches: 125.
Genes with at least one seed match: NM_000026 NM_000048 NM_000092 NM_000104 NM_000109 NM_000147 NM_000216 NM_000223 NM_000243 NM_000276 NM_000301 NM_000303 NM_000330 NM_000361 NM_000406 NM_000411 NM_000415 NM_000430 NM_000436 NM_000450 NM_000480 NM_000539 NM_000579 NM_000599 NM_000611 NM_000621 NM_000634 NM_000635 NM_000680 NM_000682 NM_000693 NM_000724 NM_000782 NM_000786 NM_000834 NM_000841 NM_000878 NM_000885 NM_000901 NM_000916 NM_000935 NM_000963 NM_000996 NM_001001323 NM_001001419 NM_001001420 NM_001001502 NM_001001701 NM_001001702 NM_001001704 NM_001001707 NM_001001870 NM_001002014 NM_001002015 NM_001002034 NM_001002257 NM_001002762 NM_001002881 NM_001003399 NM_001003676 NM_001003677 NM_001003891 NM_001004054 NM_001004125 NM_001004297 NM_001004299 NM_001004322 NM_001004441 NM_001005303 NM_001005359 NM_001005364 NM_001005473 NM_001006633 NM_001006639 NM_001006640 NM_001006657 NM_001006666 NM_001006932 NM_001007024 NM_001007025 NM_001007088 NM_001007538 NM_001008211 NM_001008212 NM_001008213 NM_001008228 NM_001008229 NM_001008529 NM_001008539 NM_001008541 NM_001008568 NM_001008569 NM_001008570 NM_001008571 NM_001008572 NM_001008660 NM_001008701 NM_001008710 NM_001008711 NM_001008777 NM_001009554 NM_001009883 NM_001010862 NM_001010934 NM_001010977 NM_001011514 NM_001011515 NM_001011516 NM_001012339 NM_001012393 NM_001012424 NM_001012651 NM_001012659 NM_001012733 NM_001012734 NM_001012750 NM_001012751 NM_001012752 NM_001012756 NM_001012763 NM_001012957 NM_001013031 NM_001013656 NM_001013678 NM_001013682 NM_001013696 NM_001013719 NM_001013724 NM_001013743 NM_001014797 NM_001015051 NM_001015877 NM_001015886 NM_001017371 NM_001017924 NM_001017970 NM_001018058 NM_001018065 NM_001018066 NM_001018090 NM_001018091 NM_001018092 NM_001018093 NM_001018094 NM_001018097 NM_001018098 NM_001018100 NM_001018101 NM_001018102 NM_001023567 NM_001024630 NM_001024843 NM_001024855 NM_001024943 NM_001024944 NM_001024946 NM_001025076 NM_001025077 NM_001025233 NM_001031 NM_001094 NM_001114 NM_001125 NM_001165 NM_001195 NM_001206 NM_001219 NM_001230 NM_001248 NM_001290 NM_001303 NM_001380 NM_001391 NM_001432 NM_001449 NM_001557 NM_001587 NM_001609 NM_001682 NM_001688 NM_001690 NM_001694 NM_001699 NM_001709 NM_001718 NM_001719 NM_001766 NM_001771 NM_001829 NM_001830 NM_001845 NM_001870 NM_001886 NM_001902 NM_001949 NM_001950 NM_001964 NM_001973 NM_001981 NM_001988 NM_001992 NM_001993 NM_002017 NM_002031 NM_002077 NM_002112 NM_002133 NM_002190 NM_002214 NM_002228 NM_002243 NM_002254 NM_002290 NM_002318 NM_002420 NM_002427 NM_002429 NM_002430 NM_002433 NM_002441 NM_002463 NM_002500 NM_002501 NM_002545 NM_002577 NM_002581 NM_002602 NM_002612 NM_002718 NM_002730 NM_002754 NM_002816 NM_002890 NM_002938 NM_002942 NM_002959 NM_003003 NM_003017 NM_003027 NM_003036 NM_003043 NM_003046 NM_003051 NM_003069 NM_003085 NM_003101 NM_003107 NM_003108 NM_003111 NM_003144 NM_003168 NM_003178 NM_003201 NM_003222 NM_003223 NM_003226 NM_003247 NM_003262 NM_003269 NM_003296 NM_003319 NM_003372 NM_003385 NM_003431 NM_003435 NM_003439 NM_003462 NM_003479 NM_003483 NM_003486 NM_003501 NM_003507 NM_003528 NM_003574 NM_003626 NM_003644 NM_003672 NM_003716 NM_003722 NM_003774 NM_003790 NM_003825 NM_003838 NM_003861 NM_003890 NM_003922 NM_003939 NM_003953 NM_003959 NM_003983 NM_004006 NM_004007 NM_004009 NM_004010 NM_004011 NM_004012 NM_004013 NM_004014 NM_004015 NM_004016 NM_004017 NM_004018 NM_004020 NM_004021 NM_004022 NM_004023 NM_004061 NM_004080 NM_004095 NM_004133 NM_004233 NM_004262 NM_004272 NM_004302 NM_004311 NM_004316 NM_004331 NM_004348 NM_004370 NM_004392 NM_004411 NM_004426 NM_004437 NM_004438 NM_004446 NM_004454 NM_004464 NM_004473 NM_004501 NM_004504 NM_004507 NM_004513 NM_004566 NM_004615 NM_004657 NM_004709 NM_004745 NM_004759 NM_004772 NM_004780 NM_004840 NM_004849 NM_004859 NM_004862 NM_004863 NM_004871 NM_004951 NM_005057 NM_005063 NM_005065 NM_005068 NM_005082 NM_005093 NM_005130 NM_005239 NM_005245 NM_005254 NM_005277 NM_005284 NM_005332 NM_005333 NM_005361 NM_005470 NM_005494 NM_005500 NM_005503 NM_005506 NM_005560 NM_005575 NM_005577 NM_005578 NM_005596 NM_005602 NM_005618 NM_005630 NM_005714 NM_005748 NM_005779 NM_005805 NM_005813 NM_005862 NM_005883 NM_005896 NM_005898 NM_005903 NM_005957 NM_005962 NM_005977 NM_005986 NM_005989 NM_005994 NM_005996 NM_006037 NM_006052 NM_006105 NM_006134 NM_006191 NM_006197 NM_006202 NM_006206 NM_006214 NM_006237 NM_006265 NM_006270 NM_006276 NM_006310 NM_006321 NM_006338 NM_006373 NM_006393 NM_006398 NM_006411 NM_006413 NM_006416 NM_006517 NM_006529 NM_006544 NM_006546 NM_006547 NM_006557 NM_006561 NM_006565 NM_006593 NM_006613 NM_006640 NM_006701 NM_006707 NM_006726 NM_006729 NM_006827 NM_006830 NM_006838 NM_006867 NM_006873 NM_006888 NM_006962 NM_007006 NM_007008 NM_007030 NM_007048 NM_007050 NM_007083 NM_007166 NM_007171 NM_007198 NM_007203 NM_007249 NM_007306 NM_007362 NM_012068 NM_012080 NM_012104 NM_012106 NM_012108 NM_012128 NM_012137 NM_012156 NM_012180 NM_012215 NM_012252 NM_012263 NM_012271 NM_012275 NM_012304 NM_012328 NM_012329 NM_012425 NM_012429 NM_012436 NM_013235 NM_013261 NM_013308 NM_013325 NM_013372 NM_013384 NM_013386 NM_013943 NM_013995 NM_014061 NM_014077 NM_014242 NM_014243 NM_014249 NM_014286 NM_014322 NM_014324 NM_014335 NM_014339 NM_014349 NM_014354 NM_014363 NM_014383 NM_014386 NM_014405 NM_014445 NM_014468 NM_014469 NM_014521 NM_014572 NM_014615 NM_014636 NM_014646 NM_014720 NM_014730 NM_014757 NM_014779 NM_014787 NM_014805 NM_014810 NM_014812 NM_014820 NM_014834 NM_014838 NM_014841 NM_014844 NM_014854 NM_014901 NM_014909 NM_014917 NM_014921 NM_014930 NM_014932 NM_014940 NM_014946 NM_014947 NM_015003 NM_015024 NM_015027 NM_015040 NM_015087 NM_015088 NM_015111 NM_015113 NM_015115 NM_015129 NM_015162 NM_015178 NM_015191 NM_015200 NM_015210 NM_015215 NM_015245 NM_015275 NM_015355 NM_015367 NM_015409 NM_015446 NM_015458 NM_015532 NM_015542 NM_015550 NM_015555 NM_015565 NM_015595 NM_015604 NM_015654 NM_015657 NM_015691 NM_015703 NM_015836 NM_015879 NM_015885 NM_015889 NM_015995 NM_016018 NM_016024 NM_016028 NM_016061 NM_016101 NM_016114 NM_016131 NM_016138 NM_016173 NM_016176 NM_016206 NM_016256 NM_016264 NM_016269 NM_016308 NM_016340 NM_016341 NM_016410 NM_016424 NM_016427 NM_016463 NM_016510 NM_016534 NM_016538 NM_016547 NM_016557 NM_016569 NM_016575 NM_016613 NM_016614 NM_016622 NM_016626 NM_016653 NM_016654 NM_016930 NM_017437 NM_017523 NM_017554 NM_017563 NM_017577 NM_017626 NM_017664 NM_017671 NM_017705 NM_017811 NM_017831 NM_017835 NM_017890 NM_017911 NM_017927 NM_017936 NM_018013 NM_018066 NM_018069 NM_018075 NM_018084 NM_018115 NM_018121 NM_018122 NM_018127 NM_018181 NM_018227 NM_018243 NM_018293 NM_018308 NM_018320 NM_018330 NM_018340 NM_018342 NM_018361 NM_018363 NM_018427 NM_018440 NM_018445 NM_018479 NM_018602 NM_018607 NM_018662 NM_018702 NM_018710 NM_018833 NM_018847 NM_018953 NM_018999 NM_019044 NM_019079 NM_019088 NM_019098 NM_019590 NM_019607 NM_020056 NM_020116 NM_020119 NM_020132 NM_020133 NM_020139 NM_020163 NM_020178 NM_020227 NM_020311 NM_020341 NM_020379 NM_020416 NM_020443 NM_020448 NM_020463 NM_020474 NM_020532 NM_020552 NM_020553 NM_020639 NM_020648 NM_020674 NM_020715 NM_020727 NM_020779 NM_020781 NM_020782 NM_020783 NM_020792 NM_020809 NM_020813 NM_020824 NM_020825 NM_020844 NM_020918 NM_020927 NM_020933 NM_020935 NM_020936 NM_020947 NM_020959 NM_020960 NM_020970 NM_021033 NM_021101 NM_021109 NM_021116 NM_021135 NM_021155 NM_021167 NM_021240 NM_021638 NM_021728 NM_021815 NM_021913 NM_021930 NM_021931 NM_021945 NM_021946 NM_021960 NM_021961 NM_021980 NM_022049 NM_022051 NM_022059 NM_022070 NM_022071 NM_022075 NM_022080 NM_022102 NM_022103 NM_022143 NM_022308 NM_022336 NM_022346 NM_022351 NM_022371 NM_022463 NM_022468 NM_022552 NM_022650 NM_022748 NM_022776 NM_022791 NM_022792 NM_022832 NM_022893 NM_022912 NM_024026 NM_024035 NM_024113 NM_024312 NM_024313 NM_024334 NM_024342 NM_024496 NM_024557 NM_024558 NM_024569 NM_024594 NM_024630 NM_024669 NM_024674 NM_024727 NM_024796 NM_024818 NM_024874 NM_024877 NM_024924 NM_024941 NM_024952 NM_024963 NM_024997 NM_025042 NM_025104 NM_025149 NM_025202 NM_025235 NM_025259 NM_030629 NM_030634 NM_030644 NM_030762 NM_030783 NM_030788 NM_030802 NM_030878 NM_030914 NM_030918 NM_030945 NM_030952 NM_030966 NM_031212 NM_031445 NM_031844 NM_031911 NM_031933 NM_031935 NM_031959 NM_032019 NM_032042 NM_032047 NM_032121 NM_032148 NM_032179 NM_032236 NM_032291 NM_032294 NM_032300 NM_032328 NM_032349 NM_032358 NM_032368 NM_032458 NM_032491 NM_032510 NM_032511 NM_032594 NM_032738 NM_032741 NM_032784 NM_032829 NM_032869 NM_032883 NM_032895 NM_032900 NM_032906 NM_032910 NM_032960 NM_032976 NM_032977 NM_032978 NM_032979 NM_032981 NM_033030 NM_033049 NM_033106 NM_033133 NM_033143 NM_033160 NM_033195 NM_033239 NM_033240 NM_033242 NM_033244 NM_033245 NM_033247 NM_033250 NM_033262 NM_033288 NM_033326 NM_033347 NM_033348 NM_033400 NM_033401 NM_033411 NM_033455 NM_033456 NM_033540 NM_033637 NM_052832 NM_052848 NM_052884 NM_052906 NM_052918 NM_053029 NM_054027 NM_057177 NM_058181 NM_058193 NM_058240 NM_058244 NM_079420 NM_079422 NM_080391 NM_080392 NM_080551 NM_080552 NM_080599 NM_080626 NM_080645 NM_080759 NM_080760 NM_080862 NM_080915 NM_080917 NM_101395 NM_130437 NM_130438 NM_130439 NM_130786 NM_130798 NM_130830 NM_133170 NM_133334 NM_133378 NM_133432 NM_133437 NM_133445 NM_133460 NM_133468 NM_133474 NM_134433 NM_138294 NM_138298 NM_138299 NM_138337 NM_138369 NM_138428 NM_138694 NM_138704 NM_138788 NM_138971 NM_138972 NM_138973 NM_138983 NM_139035 NM_139072 NM_139162 NM_139245 NM_139248 NM_139264 NM_139275 NM_144623 NM_144657 NM_144712 NM_144736 NM_144975 NM_145011 NM_145051 NM_145166 NM_145170 NM_145234 NM_145253 NM_145260 NM_145301 NM_145320 NM_145321 NM_145322 NM_145323 NM_145324 NM_145639 NM_145640 NM_145641 NM_145642 NM_145796 NM_145799 NM_147129 NM_147134 NM_147150 NM_148886 NM_148894 NM_148965 NM_148966 NM_148967 NM_148968 NM_148969 NM_148970 NM_148971 NM_148972 NM_148973 NM_148974 NM_152255 NM_152275 NM_152317 NM_152330 NM_152411 NM_152420 NM_152423 NM_152429 NM_152439 NM_152461 NM_152484 NM_152531 NM_152540 NM_152551 NM_152564 NM_152599 NM_152624 NM_152630 NM_152643 NM_152684 NM_152724 NM_152774 NM_152793 NM_152828 NM_152945 NM_152995 NM_153038 NM_153183 NM_153191 NM_153343 NM_153355 NM_153367 NM_153371 NM_153448 NM_153488 NM_153683 NM_153742 NM_153746 NM_153759 NM_153828 NM_153837 NM_170686 NM_170731 NM_170732 NM_170733 NM_170734 NM_170735 NM_170736 NM_170737 NM_171999 NM_172165 NM_172166 NM_172206 NM_172217 NM_172239 NM_172312 NM_172337 NM_172346 NM_173076 NM_173082 NM_173170 NM_173354 NM_173362 NM_173460 NM_173464 NM_173508 NM_173509 NM_173529 NM_173536 NM_173597 NM_173644 NM_173797 NM_173800 NM_173805 NM_173808 NM_173872 NM_174871 NM_174890 NM_174892 NM_174918 NM_174921 NM_174950 NM_175607 NM_175612 NM_175629 NM_175742 NM_175743 NM_175767 NM_175854 NM_175864 NM_175920 NM_177427 NM_177986 NM_177990 NM_177996 NM_178120 NM_178135 NM_178326 NM_178445 NM_178562 NM_178812 NM_178861 NM_181076 NM_181077 NM_181340 NM_181341 NM_181351 NM_181435 NM_181504 NM_181523 NM_181524 NM_181704 NM_181746 NM_181826 NM_181827 NM_181876 NM_181897 NM_182481 NM_182482 NM_182484 NM_182530 NM_182540 NM_182551 NM_182568 NM_182609 NM_182631 NM_182691 NM_182692 NM_182755 NM_182763 NM_182775 NM_182832 NM_182932 NM_182933 NM_182936 NM_182943 NM_182962 NM_183002 NM_183043 NM_183044 NM_183049 NM_183075 NM_183376 NM_183377 NM_183393 NM_183394 NM_194283 NM_194286 NM_194295 NM_194434 NM_194439 NM_194452 NM_194453 NM_197941 NM_197970 NM_197975 NM_198041 NM_198076 NM_198151 NM_198256 NM_198257 NM_198258 NM_198287 NM_198315 NM_198325 NM_198329 NM_198390 NM_198392 NM_198432 NM_198442 NM_198461 NM_198463 NM_198503 NM_198510 NM_198537 NM_198554 NM_198568 NM_198595 NM_198893 NM_198904 NM_198935 NM_198973 NM_198995 NM_199000 NM_199047 NM_199133 NM_199139 NM_199436 NM_201263 NM_201397 NM_201432 NM_201433 NM_201565 NM_201570 NM_201571 NM_201572 NM_201590 NM_201591 NM_201592 NM_201593 NM_201596 NM_201597 NM_201623 NM_201625 NM_201630 NM_203329 NM_203330 NM_203331 NM_203342 NM_203343 NM_203382 NM_203408 NM_203411 NM_203436 NM_203463 NM_203481 NM_206809 NM_206810 NM_206811 NM_206812 NM_206813 NM_206814 NM_206854 NM_206855 NM_206887 NM_207320 NM_207325 NM_207331 NM_207379 NM_207422 NM_207429 NM_207445 NM_207446 NM_207480 NM_207500 NM_207518 NM_207520 NM_207521 NM_207577 NM_207646 NM_212556 NM_212559 NM_213568 NM_213594 NM_213598 NM_213609 NM_213651 XM_027236 XM_027307 XM_037557 XM_047550 XM_047554 XM_047995 XM_048898 XM_058628 XM_059689 XM_064190 XM_067585 XM_071712 XM_117294 XM_166164 XM_208990 XM_291095 XM_350880 XM_370634 XM_370665 XM_370756 XM_370838 XM_370839 XM_371074 XM_371116 XM_371369 XM_371423 XM_371486 XM_371488 XM_371717 XM_371761 XM_371848 XM_373498 XM_373500 XM_373985 XM_374185 XM_374767 XM_374902 XM_375029 XM_375697 XM_375838 XM_375935 XM_376305 XM_376412 XM_376560 XM_376586 XM_376588 XM_376679 XM_376784 XM_376841 XM_376846 XM_378203 XM_378208 XM_378372 XM_378389 XM_378392 XM_378399 XM_378460 XM_378512 XM_378545 XM_378625 XM_378692 XM_378698 XM_378706 XM_378777 XM_378787 XM_378925 XM_379029 XM_379079 XM_379145 XM_379189 XM_379280 XM_379322 XM_379432 XM_379433 XM_379458 XM_379484 XM_379543 XM_379547 XM_379582 XM_379597 XM_379622 XM_379656 XM_379694 XM_379704 XM_379736 XM_379798 XM_379800 XM_379933 XM_380100 XM_495798 XM_495801 XM_495886 XM_495939 XM_496050 XM_496061 XM_496129 XM_496134 XM_496299 XM_496360 XM_496436 XM_496467 XM_496547 XM_496690 XM_496705 XM_496749 XM_496849 XM_496976 XM_496981 XM_496982 XM_496983 XM_496984 XM_496985 XM_498427 XM_498457 XM_498535 XM_498557 XM_498563 XM_498727 XM_498757 XM_498758 XM_498760 XM_498761 XM_498765 XM_498766 XM_498767 XM_498768 XM_498769 XM_498770 XM_498771 XM_498772 XM_498773 XM_498774 XM_498777 XM_498778 XM_498779 XM_498780 XM_498781 XM_498782 XM_498783 XM_498784 XM_498785 XM_498786 XM_498789 XM_498801 XM_498802 XM_498804 XM_498814 XM_498825 XM_498884 XM_498894 XM_499056 XM_499093 XM_499102 XM_499257 XM_499501 XM_499503 XM_499514 XM_499552 XM_499586 XR_000182 XR_000195	Genes with multiple seed matches: NM_000611 NM_000635 NM_001001419 NM_001001420 NM_001001704 NM_001008539 NM_001009554 NM_001009883 NM_001012733 NM_001012734 NM_001013696 NM_001014797 NM_001024843 NM_002254 NM_002501 NM_003046 NM_003107 NM_003178 NM_003222 NM_003247 NM_003439 NM_003953 NM_004437 NM_004657 NM_004849 NM_005130 NM_005903 NM_006037 NM_006546 NM_006726 NM_007030 NM_007306 NM_012215 NM_013995 NM_014720 NM_014757 NM_014854 NM_015088 NM_015178 NM_015215 NM_015542 NM_015550 NM_016028 NM_018361 NM_020133 NM_020163 NM_020311 NM_020727 NM_020844 NM_021815 NM_021960 NM_024569 NM_030966 NM_031445 NM_033288 NM_080551 NM_080599 NM_134433 NM_138704 NM_145260 NM_145301 NM_145320 NM_145321 NM_145322 NM_145323 NM_145324 NM_148894 NM_153183 NM_173808 NM_174921 NM_178812 NM_182763 NM_194286 NM_194295 NM_198893 NM_203329 NM_203330 NM_203331 NM_203342 NM_203343 NM_207445 NM_207577 XM_047995 XM_059689 XM_350880 XM_371423 XM_375029 XM_375697 XM_376412 XM_378460 XM_378625 XM_378925 XM_495886 XM_496134 XM_496690 XM_498757 XM_498758 XM_498760 XM_498761 XM_498765 XM_498766 XM_498767 XM_498768 XM_498769 XM_498770 XM_498771 XM_498772 XM_498773 XM_498777 XM_498778 XM_498779 XM_498780 XM_498781 XM_498782 XM_498783 XM_498784 XM_498785 XM_498786 XM_498789 XM_498801 XM_498802 XM_498804 XM_498814 XM_498825 XR_000195

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA