VIRsiRNAdb

Predicted off-targets seeds for siRNA "aaggccaaaacagcgccgacc" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :968.
Total Genes with multiple seed matches: 71.
Genes with at least one seed match: NM_000046 NM_000114 NM_000155 NM_000214 NM_000216 NM_000243 NM_000278 NM_000299 NM_000302 NM_000303 NM_000337 NM_000351 NM_000376 NM_000411 NM_000455 NM_000460 NM_000539 NM_000595 NM_000598 NM_000599 NM_000611 NM_000620 NM_000663 NM_000759 NM_000841 NM_000897 NM_000923 NM_000960 NM_000964 NM_001001336 NM_001001418 NM_001001549 NM_001001550 NM_001001555 NM_001001665 NM_001001675 NM_001001691 NM_001001698 NM_001001938 NM_001001995 NM_001002296 NM_001002860 NM_001002861 NM_001003786 NM_001003787 NM_001003788 NM_001003800 NM_001003891 NM_001004299 NM_001004307 NM_001004325 NM_001004326 NM_001004349 NM_001004419 NM_001004420 NM_001005271 NM_001005273 NM_001005337 NM_001005366 NM_001005377 NM_001005404 NM_001005405 NM_001005407 NM_001005414 NM_001005611 NM_001005914 NM_001006616 NM_001006636 NM_001007224 NM_001007278 NM_001007543 NM_001008404 NM_001008408 NM_001008409 NM_001008529 NM_001008535 NM_001008925 NM_001009553 NM_001009880 NM_001009905 NM_001009922 NM_001010910 NM_001011667 NM_001011668 NM_001011669 NM_001011670 NM_001011671 NM_001012715 NM_001012733 NM_001012734 NM_001013031 NM_001013398 NM_001013404 NM_001013617 NM_001013642 NM_001013667 NM_001013672 NM_001013712 NM_001013713 NM_001013726 NM_001014374 NM_001014440 NM_001015891 NM_001017368 NM_001017535 NM_001018029 NM_001023582 NM_001024592 NM_001024596 NM_001024608 NM_001024843 NM_001024845 NM_001024858 NM_001024948 NM_001025076 NM_001025077 NM_001025091 NM_001025109 NM_001025158 NM_001025159 NM_001025231 NM_001025242 NM_001025243 NM_001037 NM_001049 NM_001065 NM_001090 NM_001190 NM_001194 NM_001224 NM_001242 NM_001246 NM_001299 NM_001312 NM_001347 NM_001383 NM_001391 NM_001408 NM_001424 NM_001430 NM_001440 NM_001441 NM_001458 NM_001491 NM_001535 NM_001543 NM_001569 NM_001616 NM_001627 NM_001670 NM_001709 NM_001773 NM_001821 NM_001835 NM_001853 NM_001955 NM_002038 NM_002061 NM_002070 NM_002071 NM_002105 NM_002111 NM_002188 NM_002190 NM_002204 NM_002221 NM_002247 NM_002359 NM_002375 NM_002417 NM_002501 NM_002506 NM_002507 NM_002565 NM_002654 NM_002659 NM_002737 NM_002751 NM_002840 NM_002847 NM_002857 NM_002969 NM_002978 NM_003004 NM_003021 NM_003036 NM_003038 NM_003045 NM_003086 NM_003088 NM_003106 NM_003119 NM_003131 NM_003185 NM_003189 NM_003204 NM_003216 NM_003347 NM_003382 NM_003474 NM_003486 NM_003498 NM_003548 NM_003565 NM_003684 NM_003724 NM_003748 NM_003766 NM_003825 NM_003840 NM_003873 NM_003889 NM_003936 NM_003945 NM_003950 NM_003954 NM_003957 NM_003987 NM_003988 NM_004076 NM_004104 NM_004129 NM_004159 NM_004171 NM_004227 NM_004276 NM_004311 NM_004321 NM_004355 NM_004359 NM_004393 NM_004430 NM_004431 NM_004443 NM_004455 NM_004472 NM_004494 NM_004513 NM_004518 NM_004564 NM_004614 NM_004636 NM_004660 NM_004745 NM_004895 NM_004936 NM_004992 NM_004996 NM_005049 NM_005054 NM_005065 NM_005069 NM_005077 NM_005144 NM_005157 NM_005170 NM_005185 NM_005186 NM_005187 NM_005188 NM_005239 NM_005279 NM_005311 NM_005386 NM_005399 NM_005412 NM_005491 NM_005500 NM_005501 NM_005521 NM_005597 NM_005618 NM_005668 NM_005741 NM_005755 NM_005798 NM_005806 NM_005819 NM_005851 NM_005852 NM_005873 NM_005883 NM_005986 NM_005993 NM_006023 NM_006056 NM_006086 NM_006087 NM_006162 NM_006298 NM_006306 NM_006312 NM_006340 NM_006361 NM_006367 NM_006371 NM_006393 NM_006409 NM_006421 NM_006465 NM_006504 NM_006561 NM_006640 NM_006653 NM_006668 NM_006732 NM_006763 NM_006801 NM_006803 NM_006848 NM_006869 NM_006892 NM_006934 NM_006936 NM_006946 NM_007024 NM_007050 NM_007098 NM_007135 NM_007169 NM_007174 NM_007219 NM_007245 NM_007270 NM_007313 NM_007321 NM_012083 NM_012121 NM_012164 NM_012193 NM_012197 NM_012202 NM_012218 NM_012231 NM_012259 NM_012282 NM_012288 NM_012398 NM_012425 NM_012445 NM_013252 NM_013269 NM_013301 NM_013336 NM_013363 NM_013401 NM_013435 NM_014005 NM_014007 NM_014187 NM_014190 NM_014223 NM_014286 NM_014319 NM_014347 NM_014388 NM_014392 NM_014553 NM_014555 NM_014564 NM_014587 NM_014601 NM_014616 NM_014690 NM_014700 NM_014738 NM_014801 NM_014844 NM_014870 NM_014901 NM_014912 NM_014930 NM_014960 NM_015047 NM_015050 NM_015071 NM_015082 NM_015088 NM_015097 NM_015124 NM_015133 NM_015162 NM_015192 NM_015206 NM_015229 NM_015236 NM_015250 NM_015264 NM_015282 NM_015310 NM_015318 NM_015330 NM_015371 NM_015378 NM_015381 NM_015436 NM_015481 NM_015542 NM_015557 NM_015568 NM_015575 NM_015584 NM_015621 NM_015689 NM_015855 NM_015889 NM_015896 NM_015913 NM_015931 NM_015956 NM_015995 NM_016022 NM_016099 NM_016111 NM_016176 NM_016216 NM_016219 NM_016222 NM_016224 NM_016240 NM_016283 NM_016358 NM_016547 NM_016577 NM_016605 NM_016819 NM_016932 NM_016941 NM_017415 NM_017565 NM_017617 NM_017721 NM_017730 NM_017770 NM_017820 NM_017873 NM_017891 NM_017904 NM_017991 NM_018043 NM_018045 NM_018059 NM_018069 NM_018089 NM_018097 NM_018156 NM_018174 NM_018241 NM_018271 NM_018280 NM_018312 NM_018360 NM_018394 NM_018557 NM_018641 NM_018644 NM_018667 NM_018702 NM_018711 NM_018957 NM_018964 NM_018996 NM_019009 NM_019011 NM_019058 NM_019089 NM_019862 NM_019898 NM_019899 NM_019900 NM_019901 NM_019902 NM_020133 NM_020144 NM_020180 NM_020184 NM_020211 NM_020318 NM_020429 NM_020443 NM_020445 NM_020467 NM_020655 NM_020686 NM_020713 NM_020714 NM_020746 NM_020770 NM_020796 NM_020854 NM_020895 NM_020956 NM_020960 NM_020999 NM_021012 NM_021020 NM_021025 NM_021044 NM_021070 NM_021079 NM_021098 NM_021198 NM_021216 NM_021267 NM_021638 NM_021646 NM_021794 NM_021907 NM_021922 NM_021945 NM_021959 NM_021977 NM_022002 NM_022006 NM_022060 NM_022081 NM_022114 NM_022138 NM_022363 NM_022436 NM_022467 NM_022737 NM_022753 NM_022772 NM_022822 NM_022872 NM_022873 NM_022895 NM_022898 NM_022905 NM_023004 NM_023037 NM_023067 NM_023109 NM_023934 NM_024034 NM_024300 NM_024329 NM_024334 NM_024335 NM_024510 NM_024544 NM_024627 NM_024645 NM_024654 NM_024659 NM_024676 NM_024711 NM_024746 NM_024761 NM_024866 NM_024871 NM_024886 NM_024894 NM_024907 NM_024910 NM_024919 NM_024935 NM_024939 NM_025078 NM_025126 NM_025204 NM_025224 NM_025245 NM_030569 NM_030630 NM_030796 NM_030821 NM_030884 NM_030914 NM_030927 NM_030966 NM_031205 NM_031265 NM_031448 NM_031475 NM_031890 NM_031912 NM_032023 NM_032041 NM_032108 NM_032213 NM_032242 NM_032271 NM_032289 NM_032294 NM_032303 NM_032317 NM_032371 NM_032420 NM_032510 NM_032536 NM_032546 NM_032590 NM_032638 NM_032711 NM_032727 NM_032737 NM_032788 NM_032789 NM_032808 NM_032817 NM_032831 NM_032853 NM_032910 NM_032920 NM_032976 NM_032978 NM_032979 NM_032981 NM_032983 NM_032984 NM_033013 NM_033086 NM_033131 NM_033147 NM_033148 NM_033212 NM_033296 NM_033387 NM_033392 NM_033409 NM_033656 NM_033661 NM_048368 NM_052811 NM_052813 NM_052828 NM_052854 NM_052861 NM_052918 NM_052947 NM_052988 NM_054025 NM_057178 NM_058167 NM_058175 NM_058182 NM_058197 NM_078487 NM_078628 NM_080429 NM_080546 NM_080599 NM_080625 NM_080647 NM_080670 NM_080738 NM_080865 NM_130435 NM_130440 NM_130773 NM_130798 NM_130842 NM_130843 NM_130847 NM_133170 NM_133443 NM_133463 NM_134422 NM_134423 NM_134424 NM_134425 NM_134434 NM_138418 NM_138423 NM_138567 NM_138576 NM_138768 NM_138934 NM_139016 NM_139021 NM_139214 NM_144579 NM_144617 NM_144640 NM_144683 NM_145065 NM_145201 NM_145257 NM_145306 NM_145313 NM_145348 NM_145649 NM_145655 NM_145861 NM_145867 NM_146387 NM_146388 NM_147159 NM_147160 NM_147202 NM_148169 NM_148172 NM_148173 NM_148919 NM_148957 NM_148980 NM_152235 NM_152253 NM_152264 NM_152271 NM_152280 NM_152362 NM_152378 NM_152383 NM_152554 NM_152558 NM_152595 NM_152608 NM_152724 NM_152757 NM_152760 NM_152776 NM_152840 NM_152841 NM_152842 NM_153029 NM_153335 NM_153350 NM_153367 NM_153442 NM_153482 NM_153701 NM_170731 NM_170732 NM_170733 NM_170734 NM_170735 NM_170781 NM_171982 NM_172020 NM_172106 NM_172107 NM_172206 NM_172217 NM_172219 NM_172220 NM_172234 NM_172387 NM_172388 NM_172389 NM_173065 NM_173473 NM_173477 NM_173509 NM_173532 NM_173547 NM_173565 NM_173590 NM_173689 NM_173833 NM_173851 NM_174917 NM_175053 NM_175062 NM_175848 NM_175849 NM_175850 NM_175923 NM_175931 NM_176799 NM_176801 NM_177403 NM_177427 NM_177974 NM_177999 NM_178033 NM_178120 NM_178129 NM_178138 NM_178145 NM_178172 NM_178225 NM_178226 NM_178353 NM_178422 NM_178502 NM_178519 NM_178569 NM_181349 NM_181484 NM_181552 NM_181689 NM_181782 NM_181862 NM_181863 NM_182470 NM_182471 NM_182484 NM_182518 NM_182534 NM_182540 NM_182568 NM_182612 NM_182632 NM_182637 NM_182640 NM_182734 NM_182832 NM_182978 NM_183360 NM_183361 NM_183373 NM_183395 NM_187841 NM_194271 NM_194288 NM_194298 NM_194303 NM_194309 NM_194315 NM_194316 NM_194317 NM_194352 NM_194457 NM_194458 NM_198157 NM_198207 NM_198266 NM_198478 NM_198492 NM_198493 NM_198530 NM_198553 NM_198595 NM_198880 NM_199072 NM_199228 NM_199356 NM_199367 NM_199454 NM_199461 NM_201649 NM_203306 NM_203329 NM_203330 NM_203331 NM_203374 NM_203394 NM_203434 NM_203456 NM_203468 NM_205843 NM_206835 NM_206962 NM_207032 NM_207033 NM_207034 NM_207111 NM_207112 NM_207116 NM_207125 NM_207126 NM_207127 NM_207129 NM_207368 NM_207395 NM_207432 NM_207442 NM_207451 NM_207470 NM_207473 NM_207483 NM_207577 NM_207644 NM_213590 NM_213720 NM_213723 NM_214462 XM_028810 XM_032278 XM_038150 XM_042936 XM_047610 XM_048898 XM_067585 XM_088768 XM_097580 XM_167044 XM_211174 XM_290401 XM_293380 XM_370607 XM_370696 XM_370849 XM_371074 XM_371488 XM_372273 XM_372716 XM_372774 XM_373491 XM_374110 XM_374186 XM_374286 XM_374343 XM_375359 XM_375378 XM_375669 XM_376018 XM_376334 XM_376558 XM_376652 XM_377076 XM_378329 XM_378390 XM_378456 XM_378517 XM_378625 XM_378631 XM_378777 XM_378822 XM_378883 XM_378993 XM_379114 XM_379118 XM_379136 XM_379214 XM_379391 XM_379483 XM_379530 XM_379534 XM_379595 XM_379637 XM_379651 XM_379877 XM_379892 XM_380099 XM_380154 XM_380159 XM_496134 XM_496223 XM_496328 XM_496519 XM_496581 XM_496876 XM_496895 XM_497080 XM_498491 XM_498532 XM_498534 XM_498557 XM_498582 XM_498715 XM_498741 XM_498825 XM_498828 XM_498849 XM_498852 XM_498907 XM_498912 XM_498917 XM_499003 XM_499047 XM_499056 XM_499088 XM_499095 XM_499106 XM_499110 XM_499293 XM_499323 XM_499503 XM_499543 XM_499558 XR_000190 XR_000194 XR_000227 XR_000268	Genes with multiple seed matches: NM_000539 NM_000611 NM_001001549 NM_001001550 NM_001001555 NM_001004325 NM_001004349 NM_001009880 NM_001543 NM_002501 NM_003565 NM_004129 NM_004321 NM_004992 NM_005144 NM_005311 NM_005597 NM_005986 NM_006312 NM_007321 NM_012231 NM_012398 NM_014286 NM_014347 NM_014870 NM_015264 NM_015381 NM_016547 NM_017873 NM_018097 NM_019009 NM_019089 NM_021638 NM_021945 NM_023067 NM_024866 NM_025204 NM_030630 NM_030927 NM_031265 NM_032737 NM_032920 NM_144579 NM_171982 NM_175062 NM_176799 NM_177999 NM_178225 NM_178226 NM_182534 NM_198207 NM_198595 NM_203329 NM_203330 NM_203331 NM_205843 NM_206835 NM_207470 NM_207483 XM_047610 XM_371074 XM_372273 XM_377076 XM_378883 XM_379391 XM_379637 XM_498741 XM_498825 XM_499056 XM_499503 XR_000268

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA