VIRsiRNAdb

Predicted off-targets seeds for siRNA "aacgguuuacgucuacucgcg" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :958.
Total Genes with multiple seed matches: 61.
Genes with at least one seed match: NM_000031 NM_000037 NM_000079 NM_000209 NM_000262 NM_000268 NM_000278 NM_000330 NM_000355 NM_000369 NM_000463 NM_000544 NM_000602 NM_000632 NM_000664 NM_000682 NM_000707 NM_000724 NM_000733 NM_000787 NM_000794 NM_000817 NM_000828 NM_000843 NM_000915 NM_000961 NM_001001329 NM_001001331 NM_001001396 NM_001001412 NM_001001433 NM_001001434 NM_001001687 NM_001001706 NM_001001732 NM_001001788 NM_001001789 NM_001001890 NM_001002233 NM_001002260 NM_001002762 NM_001002814 NM_001003682 NM_001003800 NM_001003945 NM_001004299 NM_001004302 NM_001004327 NM_001004347 NM_001004434 NM_001004707 NM_001004720 NM_001004722 NM_001005290 NM_001005388 NM_001005407 NM_001005502 NM_001005845 NM_001006639 NM_001006640 NM_001006641 NM_001006642 NM_001006643 NM_001007255 NM_001007262 NM_001008211 NM_001008212 NM_001008213 NM_001008707 NM_001009553 NM_001009932 NM_001009933 NM_001009934 NM_001010850 NM_001010864 NM_001010866 NM_001010883 NM_001012267 NM_001012424 NM_001012426 NM_001012427 NM_001012727 NM_001012733 NM_001012734 NM_001012761 NM_001012988 NM_001013031 NM_001013617 NM_001013677 NM_001013693 NM_001013712 NM_001013720 NM_001013723 NM_001014373 NM_001018115 NM_001024226 NM_001024227 NM_001024228 NM_001024808 NM_001025266 NM_001031 NM_001072 NM_001167 NM_001190 NM_001204 NM_001291 NM_001300 NM_001356 NM_001365 NM_001387 NM_001438 NM_001440 NM_001450 NM_001532 NM_001624 NM_001658 NM_001678 NM_001683 NM_001684 NM_001723 NM_001753 NM_001754 NM_001803 NM_001834 NM_001839 NM_001848 NM_001874 NM_001909 NM_001941 NM_001961 NM_001980 NM_001996 NM_002025 NM_002061 NM_002077 NM_002088 NM_002101 NM_002111 NM_002150 NM_002186 NM_002193 NM_002204 NM_002221 NM_002226 NM_002251 NM_002309 NM_002340 NM_002357 NM_002401 NM_002460 NM_002468 NM_002507 NM_002509 NM_002531 NM_002562 NM_002639 NM_002655 NM_002657 NM_002664 NM_002666 NM_002699 NM_002743 NM_002747 NM_002821 NM_002942 NM_002956 NM_002957 NM_003072 NM_003108 NM_003152 NM_003155 NM_003216 NM_003282 NM_003317 NM_003326 NM_003345 NM_003371 NM_003436 NM_003445 NM_003458 NM_003490 NM_003562 NM_003581 NM_003586 NM_003607 NM_003621 NM_003639 NM_003644 NM_003654 NM_003660 NM_003679 NM_003681 NM_003745 NM_003749 NM_003763 NM_003812 NM_003816 NM_003839 NM_003885 NM_003901 NM_003927 NM_003930 NM_003954 NM_003987 NM_003988 NM_003989 NM_003990 NM_004050 NM_004090 NM_004093 NM_004142 NM_004155 NM_004212 NM_004263 NM_004273 NM_004296 NM_004302 NM_004315 NM_004321 NM_004326 NM_004352 NM_004356 NM_004383 NM_004393 NM_004405 NM_004409 NM_004423 NM_004434 NM_004442 NM_004502 NM_004526 NM_004566 NM_004588 NM_004628 NM_004640 NM_004673 NM_004711 NM_004732 NM_004734 NM_004737 NM_004747 NM_004780 NM_004781 NM_004789 NM_004807 NM_004937 NM_004959 NM_004961 NM_005027 NM_005028 NM_005099 NM_005116 NM_005137 NM_005157 NM_005173 NM_005312 NM_005430 NM_005501 NM_005523 NM_005535 NM_005597 NM_005679 NM_005721 NM_005736 NM_005748 NM_005786 NM_005823 NM_005843 NM_005867 NM_005883 NM_005895 NM_005927 NM_005957 NM_005999 NM_006022 NM_006034 NM_006052 NM_006091 NM_006122 NM_006154 NM_006160 NM_006161 NM_006167 NM_006201 NM_006232 NM_006266 NM_006272 NM_006312 NM_006361 NM_006380 NM_006412 NM_006426 NM_006438 NM_006544 NM_006563 NM_006599 NM_006628 NM_006641 NM_006688 NM_006702 NM_006730 NM_006736 NM_006738 NM_006739 NM_006824 NM_006850 NM_006898 NM_006925 NM_006946 NM_006955 NM_007030 NM_007078 NM_007084 NM_007097 NM_007110 NM_007120 NM_007174 NM_007200 NM_007249 NM_007256 NM_007313 NM_007325 NM_007335 NM_007336 NM_007338 NM_007363 NM_012069 NM_012098 NM_012121 NM_012145 NM_012186 NM_012236 NM_012264 NM_012275 NM_012285 NM_012308 NM_012312 NM_012314 NM_012405 NM_012409 NM_013272 NM_013280 NM_013325 NM_013343 NM_013347 NM_013385 NM_013404 NM_014177 NM_014191 NM_014232 NM_014279 NM_014289 NM_014292 NM_014468 NM_014512 NM_014550 NM_014572 NM_014578 NM_014587 NM_014610 NM_014648 NM_014649 NM_014661 NM_014671 NM_014690 NM_014723 NM_014732 NM_014744 NM_014746 NM_014758 NM_014759 NM_014776 NM_014786 NM_014792 NM_014809 NM_014826 NM_014830 NM_014839 NM_014844 NM_014916 NM_014919 NM_014932 NM_014948 NM_014997 NM_015001 NM_015033 NM_015063 NM_015074 NM_015082 NM_015090 NM_015094 NM_015124 NM_015140 NM_015144 NM_015151 NM_015161 NM_015193 NM_015194 NM_015205 NM_015235 NM_015259 NM_015282 NM_015320 NM_015329 NM_015349 NM_015359 NM_015369 NM_015381 NM_015433 NM_015439 NM_015537 NM_015610 NM_015649 NM_015651 NM_015678 NM_015710 NM_016003 NM_016212 NM_016233 NM_016418 NM_016524 NM_016534 NM_016541 NM_016564 NM_016598 NM_016647 NM_016815 NM_017424 NM_017439 NM_017460 NM_017527 NM_017548 NM_017551 NM_017575 NM_017622 NM_017623 NM_017626 NM_017680 NM_017703 NM_017712 NM_017732 NM_017754 NM_017760 NM_017773 NM_017828 NM_017896 NM_017919 NM_017921 NM_017924 NM_017931 NM_017999 NM_018026 NM_018089 NM_018133 NM_018273 NM_018320 NM_018358 NM_018378 NM_018425 NM_018450 NM_018579 NM_018676 NM_018715 NM_018951 NM_018952 NM_019034 NM_019061 NM_019075 NM_019076 NM_019077 NM_019078 NM_019093 NM_019094 NM_020062 NM_020128 NM_020133 NM_020161 NM_020180 NM_020359 NM_020426 NM_020429 NM_020444 NM_020448 NM_020475 NM_020476 NM_020477 NM_020526 NM_020546 NM_020689 NM_020695 NM_020713 NM_020737 NM_020740 NM_020761 NM_020778 NM_020810 NM_020820 NM_020858 NM_020870 NM_020871 NM_020918 NM_020947 NM_020962 NM_020993 NM_021027 NM_021033 NM_021049 NM_021080 NM_021098 NM_021116 NM_021168 NM_021570 NM_021619 NM_021624 NM_021638 NM_021945 NM_021958 NM_021980 NM_021984 NM_021987 NM_021990 NM_022003 NM_022106 NM_022571 NM_022640 NM_022764 NM_022822 NM_022898 NM_023037 NM_023076 NM_023947 NM_024005 NM_024025 NM_024040 NM_024052 NM_024086 NM_024109 NM_024299 NM_024306 NM_024337 NM_024342 NM_024423 NM_024541 NM_024561 NM_024605 NM_024627 NM_024646 NM_024652 NM_024669 NM_024686 NM_024710 NM_024726 NM_024736 NM_024738 NM_024756 NM_024771 NM_024837 NM_024933 NM_024935 NM_024952 NM_024989 NM_025002 NM_025010 NM_025084 NM_025149 NM_025151 NM_025154 NM_025161 NM_025176 NM_025203 NM_025217 NM_025219 NM_025251 NM_025263 NM_030576 NM_030621 NM_030626 NM_030629 NM_030633 NM_030643 NM_030753 NM_030913 NM_030918 NM_030964 NM_030968 NM_031200 NM_031283 NM_031426 NM_031448 NM_031462 NM_031475 NM_031484 NM_032037 NM_032046 NM_032109 NM_032129 NM_032143 NM_032189 NM_032262 NM_032268 NM_032271 NM_032317 NM_032329 NM_032361 NM_032372 NM_032432 NM_032451 NM_032482 NM_032493 NM_032513 NM_032529 NM_032636 NM_032638 NM_032727 NM_032790 NM_032818 NM_032826 NM_032837 NM_032840 NM_032855 NM_032932 NM_032958 NM_032959 NM_032995 NM_033018 NM_033129 NM_033133 NM_033141 NM_033161 NM_033346 NM_033495 NM_033513 NM_033550 NM_033666 NM_052878 NM_052901 NM_052918 NM_052919 NM_052950 NM_052954 NM_052998 NM_053024 NM_053042 NM_057169 NM_057170 NM_058175 NM_058246 NM_078469 NM_079834 NM_080598 NM_080678 NM_080738 NM_080836 NM_130783 NM_133328 NM_133330 NM_133331 NM_133332 NM_133333 NM_133335 NM_133336 NM_133371 NM_133373 NM_133443 NM_133452 NM_133632 NM_133633 NM_133642 NM_134264 NM_138284 NM_138342 NM_138385 NM_138402 NM_138414 NM_138457 NM_138479 NM_138566 NM_138576 NM_138614 NM_138640 NM_138713 NM_138714 NM_138774 NM_138983 NM_139247 NM_139353 NM_144683 NM_144716 NM_144767 NM_144984 NM_145003 NM_145013 NM_145043 NM_145071 NM_145117 NM_145159 NM_145238 NM_145245 NM_145304 NM_145660 NM_145735 NM_145861 NM_145914 NM_147127 NM_152272 NM_152307 NM_152406 NM_152472 NM_152482 NM_152493 NM_152558 NM_152613 NM_152880 NM_152881 NM_152882 NM_152883 NM_153025 NM_153044 NM_153350 NM_153355 NM_153616 NM_153617 NM_153618 NM_153619 NM_153712 NM_153715 NM_156036 NM_156037 NM_170665 NM_170705 NM_171999 NM_173160 NM_173170 NM_173214 NM_173465 NM_173483 NM_173535 NM_173557 NM_173566 NM_173629 NM_173793 NM_173795 NM_173803 NM_173854 NM_174922 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_175901 NM_175922 NM_176786 NM_177405 NM_177427 NM_177438 NM_177550 NM_177924 NM_178125 NM_178228 NM_178326 NM_178514 NM_178526 NM_178536 NM_178816 NM_180989 NM_181339 NM_181349 NM_181670 NM_181784 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181833 NM_181834 NM_181835 NM_182487 NM_182534 NM_182554 NM_182557 NM_182564 NM_182585 NM_182700 NM_182740 NM_182854 NM_182923 NM_182964 NM_183422 NM_194259 NM_194260 NM_194261 NM_194295 NM_194298 NM_194310 NM_194356 NM_194452 NM_194453 NM_198089 NM_198138 NM_198240 NM_198277 NM_198320 NM_198390 NM_198400 NM_198582 NM_198593 NM_198594 NM_198595 NM_198679 NM_198835 NM_198956 NM_199040 NM_199045 NM_199050 NM_199078 NM_199175 NM_199263 NM_199350 NM_199415 NM_199461 NM_201432 NM_201433 NM_201555 NM_201556 NM_201557 NM_201570 NM_201571 NM_201572 NM_201590 NM_201593 NM_201596 NM_201597 NM_203327 NM_203351 NM_203373 NM_203426 NM_203451 NM_203459 NM_205843 NM_205862 NM_206594 NM_206595 NM_206835 NM_206914 NM_206933 NM_207032 NM_207334 NM_207335 NM_207372 NM_207394 NM_207458 NM_207495 XM_032901 XM_032945 XM_032996 XM_041126 XM_048592 XM_097753 XM_113743 XM_208990 XM_211092 XM_297816 XM_370648 XM_370654 XM_371074 XM_371176 XM_371230 XM_371423 XM_371461 XM_371542 XM_372004 XM_373562 XM_373742 XM_373786 XM_373800 XM_373981 XM_374141 XM_374145 XM_374260 XM_374589 XM_374768 XM_375275 XM_375284 XM_375373 XM_376305 XM_376558 XM_376567 XM_376607 XM_376720 XM_376727 XM_378299 XM_378350 XM_378436 XM_378512 XM_378542 XM_378544 XM_378639 XM_378643 XM_378738 XM_378750 XM_378822 XM_378858 XM_378860 XM_378861 XM_378883 XM_378941 XM_379065 XM_379141 XM_379163 XM_379276 XM_379409 XM_379636 XM_379637 XM_379702 XM_379774 XM_379827 XM_379967 XM_379979 XM_380171 XM_495886 XM_495950 XM_496217 XM_496266 XM_496502 XM_496554 XM_496724 XM_496964 XM_497072 XM_498436 XM_498563 XM_498567 XM_498614 XM_498632 XM_498651 XM_498662 XM_498681 XM_498683 XM_498724 XM_498814 XM_498869 XM_498883 XM_498901 XM_498933 XM_498958 XM_499009 XM_499047 XM_499093 XM_499164 XM_499566 XR_000167 XR_000216 XR_000261 XR_000273 XR_000274 XR_000292	Genes with multiple seed matches: NM_001001331 NM_001002762 NM_001008211 NM_001008212 NM_001008213 NM_001012733 NM_001012734 NM_001013693 NM_001013712 NM_001683 NM_002025 NM_003681 NM_005116 NM_005430 NM_005883 NM_006898 NM_007335 NM_007336 NM_007338 NM_012409 NM_014279 NM_014919 NM_014997 NM_015144 NM_015205 NM_015282 NM_015349 NM_017551 NM_017626 NM_018579 NM_018951 NM_020133 NM_020180 NM_020761 NM_021168 NM_021980 NM_030913 NM_032109 NM_033129 NM_130783 NM_133330 NM_133331 NM_133332 NM_133333 NM_133335 NM_145117 NM_153715 NM_173854 NM_175901 NM_182564 NM_182964 NM_194310 NM_203327 NM_207372 XM_297816 XM_371423 XM_375373 XM_378750 XM_378822 XM_379637 XM_499009

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA