VIRsiRNAdb

Predicted off-targets seeds for siRNA "agcaguacgcacacaaucgaa" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :918.
Total Genes with multiple seed matches: 60.
Genes with at least one seed match: NM_000163 NM_000214 NM_000248 NM_000330 NM_000332 NM_000335 NM_000337 NM_000351 NM_000418 NM_000448 NM_000484 NM_000555 NM_000574 NM_000587 NM_000611 NM_000612 NM_000628 NM_000633 NM_000726 NM_000786 NM_000817 NM_000902 NM_000903 NM_000918 NM_000983 NM_000997 NM_001001342 NM_001001419 NM_001001420 NM_001001434 NM_001001436 NM_001001557 NM_001001704 NM_001001732 NM_001001791 NM_001001894 NM_001003789 NM_001003940 NM_001003942 NM_001003943 NM_001004301 NM_001004322 NM_001004328 NM_001004349 NM_001004355 NM_001005375 NM_001005463 NM_001005473 NM_001005743 NM_001005744 NM_001005745 NM_001005746 NM_001005747 NM_001005785 NM_001005786 NM_001006932 NM_001007188 NM_001007247 NM_001007248 NM_001007267 NM_001007471 NM_001008226 NM_001008392 NM_001008493 NM_001008494 NM_001008742 NM_001008745 NM_001008844 NM_001009956 NM_001009960 NM_001010913 NM_001010976 NM_001011713 NM_001012264 NM_001012651 NM_001013619 NM_001013677 NM_001013682 NM_001013707 NM_001013848 NM_001014445 NM_001015051 NM_001017368 NM_001017423 NM_001017987 NM_001017989 NM_001017992 NM_001018061 NM_001018062 NM_001018065 NM_001018066 NM_001024401 NM_001024455 NM_001024599 NM_001024630 NM_001024733 NM_001024858 NM_001024916 NM_001025076 NM_001025077 NM_001025109 NM_001093 NM_001112 NM_001148 NM_001204 NM_001304 NM_001310 NM_001386 NM_001419 NM_001422 NM_001432 NM_001439 NM_001450 NM_001547 NM_001565 NM_001616 NM_001650 NM_001668 NM_001672 NM_001716 NM_001964 NM_001968 NM_001969 NM_002025 NM_002131 NM_002145 NM_002222 NM_002223 NM_002264 NM_002287 NM_002310 NM_002356 NM_002359 NM_002381 NM_002390 NM_002417 NM_002500 NM_002501 NM_002507 NM_002522 NM_002534 NM_002556 NM_002577 NM_002597 NM_002677 NM_002787 NM_002847 NM_002852 NM_002860 NM_002923 NM_002945 NM_002959 NM_003010 NM_003023 NM_003025 NM_003030 NM_003048 NM_003051 NM_003127 NM_003155 NM_003161 NM_003204 NM_003218 NM_003223 NM_003256 NM_003262 NM_003316 NM_003374 NM_003417 NM_003438 NM_003507 NM_003617 NM_003633 NM_003654 NM_003672 NM_003681 NM_003713 NM_003744 NM_003781 NM_003783 NM_003831 NM_003858 NM_003928 NM_003968 NM_004004 NM_004028 NM_004081 NM_004155 NM_004277 NM_004294 NM_004300 NM_004330 NM_004348 NM_004415 NM_004449 NM_004475 NM_004502 NM_004521 NM_004562 NM_004575 NM_004578 NM_004598 NM_004667 NM_004690 NM_004707 NM_004736 NM_004744 NM_004791 NM_004891 NM_004897 NM_004915 NM_004952 NM_004959 NM_004970 NM_004992 NM_005061 NM_005080 NM_005099 NM_005134 NM_005154 NM_005187 NM_005197 NM_005202 NM_005229 NM_005316 NM_005318 NM_005414 NM_005431 NM_005503 NM_005518 NM_005578 NM_005595 NM_005604 NM_005668 NM_005669 NM_005687 NM_005738 NM_005797 NM_005808 NM_005828 NM_005880 NM_005902 NM_005903 NM_005923 NM_005978 NM_006015 NM_006057 NM_006178 NM_006212 NM_006241 NM_006322 NM_006359 NM_006379 NM_006380 NM_006408 NM_006451 NM_006475 NM_006516 NM_006540 NM_006546 NM_006561 NM_006596 NM_006603 NM_006675 NM_006699 NM_006722 NM_006729 NM_006738 NM_006748 NM_006793 NM_006800 NM_006811 NM_006828 NM_006856 NM_006884 NM_006955 NM_006974 NM_006979 NM_007050 NM_007054 NM_007081 NM_007099 NM_007174 NM_007200 NM_007247 NM_007287 NM_007288 NM_007289 NM_007335 NM_007336 NM_007338 NM_012082 NM_012098 NM_012161 NM_012174 NM_012233 NM_012275 NM_012296 NM_012300 NM_012305 NM_012334 NM_012409 NM_012448 NM_013255 NM_013261 NM_013286 NM_013412 NM_013441 NM_013447 NM_013987 NM_013988 NM_014015 NM_014080 NM_014098 NM_014207 NM_014214 NM_014345 NM_014429 NM_014616 NM_014637 NM_014657 NM_014670 NM_014674 NM_014678 NM_014721 NM_014730 NM_014766 NM_014803 NM_014804 NM_014810 NM_014821 NM_014837 NM_014864 NM_014880 NM_014887 NM_015002 NM_015050 NM_015056 NM_015064 NM_015082 NM_015129 NM_015144 NM_015155 NM_015170 NM_015178 NM_015191 NM_015192 NM_015216 NM_015282 NM_015299 NM_015315 NM_015317 NM_015326 NM_015446 NM_015470 NM_015559 NM_015560 NM_015578 NM_015589 NM_015691 NM_015833 NM_015865 NM_015948 NM_016002 NM_016018 NM_016057 NM_016175 NM_016206 NM_016217 NM_016231 NM_016243 NM_016275 NM_016322 NM_016376 NM_016389 NM_016390 NM_016531 NM_016540 NM_016588 NM_016592 NM_016598 NM_016607 NM_016626 NM_016818 NM_016831 NM_017444 NM_017489 NM_017514 NM_017594 NM_017614 NM_017709 NM_017736 NM_017752 NM_017768 NM_017769 NM_017778 NM_017811 NM_017872 NM_017920 NM_017924 NM_017926 NM_017968 NM_017972 NM_017990 NM_018024 NM_018069 NM_018096 NM_018133 NM_018176 NM_018199 NM_018212 NM_018235 NM_018264 NM_018326 NM_018357 NM_018382 NM_018439 NM_018450 NM_018469 NM_018509 NM_018579 NM_018717 NM_018847 NM_018937 NM_018999 NM_019027 NM_019035 NM_019053 NM_019084 NM_019857 NM_019885 NM_020130 NM_020149 NM_020161 NM_020179 NM_020192 NM_020215 NM_020227 NM_020299 NM_020342 NM_020348 NM_020354 NM_020363 NM_020364 NM_020367 NM_020420 NM_020432 NM_020440 NM_020445 NM_020531 NM_020724 NM_020742 NM_020777 NM_020810 NM_020839 NM_020851 NM_020858 NM_020947 NM_020952 NM_020977 NM_021064 NM_021116 NM_021135 NM_021143 NM_021153 NM_021201 NM_021205 NM_021238 NM_021240 NM_021255 NM_021260 NM_021612 NM_021706 NM_021724 NM_021804 NM_021813 NM_021814 NM_021818 NM_021927 NM_022130 NM_022356 NM_022484 NM_022576 NM_022832 NM_022898 NM_023915 NM_023929 NM_024017 NM_024554 NM_024558 NM_024594 NM_024598 NM_024607 NM_024656 NM_024677 NM_024758 NM_024761 NM_024886 NM_024889 NM_024971 NM_025074 NM_025197 NM_025224 NM_030798 NM_030806 NM_030816 NM_030895 NM_031416 NM_031433 NM_031461 NM_031490 NM_031862 NM_031942 NM_032023 NM_032041 NM_032138 NM_032174 NM_032217 NM_032221 NM_032295 NM_032314 NM_032328 NM_032375 NM_032440 NM_032456 NM_032632 NM_032647 NM_032706 NM_032711 NM_032721 NM_032813 NM_032822 NM_032866 NM_032874 NM_032961 NM_032966 NM_032973 NM_033035 NM_033161 NM_033170 NM_033171 NM_033172 NM_033173 NM_033184 NM_033342 NM_033346 NM_033389 NM_033503 NM_033535 NM_033551 NM_033624 NM_033644 NM_033645 NM_052832 NM_052847 NM_052900 NM_052966 NM_052996 NM_053023 NM_053279 NM_054110 NM_057178 NM_078470 NM_078629 NM_078630 NM_080491 NM_080550 NM_080618 NM_080665 NM_080669 NM_080828 NM_080872 NM_130807 NM_130809 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837 NM_130842 NM_130843 NM_133170 NM_133259 NM_134470 NM_138298 NM_138299 NM_138363 NM_138444 NM_138456 NM_138494 NM_138551 NM_138576 NM_138636 NM_138792 NM_138995 NM_138998 NM_139135 NM_139239 NM_139246 NM_139321 NM_144607 NM_144626 NM_144767 NM_144974 NM_144975 NM_145175 NM_145257 NM_145276 NM_145278 NM_145286 NM_145328 NM_145330 NM_145646 NM_145663 NM_145693 NM_145698 NM_145799 NM_145810 NM_145818 NM_145899 NM_145901 NM_145902 NM_145903 NM_145904 NM_145905 NM_145906 NM_152235 NM_152267 NM_152274 NM_152281 NM_152309 NM_152340 NM_152390 NM_152429 NM_152460 NM_152681 NM_152716 NM_152754 NM_152842 NM_152916 NM_152917 NM_152918 NM_152919 NM_152920 NM_152921 NM_152939 NM_152990 NM_152994 NM_153022 NM_153033 NM_153035 NM_153234 NM_153239 NM_153348 NM_153450 NM_153610 NM_153616 NM_153617 NM_153618 NM_153619 NM_153649 NM_153683 NM_170662 NM_170665 NM_171998 NM_172020 NM_172097 NM_172239 NM_173075 NM_173156 NM_173170 NM_173469 NM_173562 NM_173669 NM_173688 NM_173803 NM_173809 NM_173823 NM_174878 NM_175711 NM_175859 NM_175931 NM_176095 NM_176814 NM_176815 NM_177414 NM_177550 NM_177554 NM_177947 NM_177948 NM_178037 NM_178038 NM_178039 NM_178040 NM_178145 NM_178151 NM_178152 NM_178153 NM_178169 NM_178426 NM_178427 NM_178441 NM_178815 NM_178818 NM_178836 NM_181332 NM_181351 NM_181571 NM_181656 NM_181709 NM_181727 NM_181782 NM_181787 NM_181826 NM_181827 NM_182554 NM_182558 NM_182596 NM_182613 NM_182637 NM_182638 NM_182717 NM_182718 NM_182719 NM_182720 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 NM_182734 NM_182769 NM_182770 NM_182771 NM_182772 NM_182789 NM_182850 NM_182853 NM_182918 NM_183004 NM_183010 NM_183011 NM_183012 NM_183013 NM_183060 NM_183323 NM_184042 NM_194252 NM_194295 NM_198056 NM_198123 NM_198124 NM_198158 NM_198159 NM_198177 NM_198178 NM_198195 NM_198197 NM_198256 NM_198257 NM_198258 NM_198325 NM_198381 NM_198461 NM_198480 NM_198485 NM_198490 NM_198493 NM_198499 NM_198554 NM_198889 NM_198991 NM_199000 NM_199045 NM_199131 NM_199343 NM_199420 NM_201413 NM_201414 NM_201555 NM_201556 NM_201557 NM_201568 NM_201569 NM_203329 NM_203330 NM_203331 NM_203395 NM_203463 NM_206938 NM_206939 NM_206940 NM_206944 NM_206945 NM_206946 NM_206947 NM_207113 NM_207174 NM_207333 NM_207483 NM_207517 NM_207627 NM_207628 NM_207629 NM_207630 NM_207645 NM_212460 NM_213612 NM_214677 NM_214678 NM_214679 XM_027307 XM_037557 XM_043493 XM_045290 XM_053966 XM_059399 XM_059832 XM_059929 XM_086761 XM_088680 XM_208361 XM_290342 XM_290401 XM_350880 XM_370928 XM_371024 XM_371369 XM_371759 XM_371769 XM_372723 XM_373472 XM_373575 XM_373660 XM_373691 XM_374270 XM_374435 XM_374880 XM_375090 XM_375307 XM_375838 XM_376303 XM_376560 XM_376784 XM_376986 XM_378236 XM_378312 XM_378316 XM_378329 XM_378388 XM_378389 XM_378390 XM_378412 XM_378421 XM_378434 XM_378701 XM_378708 XM_378760 XM_379069 XM_379145 XM_379146 XM_379267 XM_379273 XM_379276 XM_379322 XM_379438 XM_379619 XM_379637 XM_379851 XM_379877 XM_495841 XM_495937 XM_496134 XM_496268 XM_496408 XM_496436 XM_496467 XM_496690 XM_496692 XM_496777 XM_496895 XM_496959 XM_496964 XM_496966 XM_496981 XM_496982 XM_496983 XM_496984 XM_496985 XM_497080 XM_497160 XM_498442 XM_498443 XM_498451 XM_498454 XM_498491 XM_498506 XM_498525 XM_498546 XM_498596 XM_498614 XM_498666 XM_498823 XM_498946 XM_499093 XM_499147 XM_499164 XM_499182 XM_499323 XM_499572 XM_499573 XM_499581 XM_499583 XR_000195 XR_000216 XR_000217	Genes with multiple seed matches: NM_000484 NM_000611 NM_000902 NM_000983 NM_001001419 NM_001001420 NM_001004328 NM_001008493 NM_001012651 NM_001025076 NM_001025077 NM_001969 NM_002264 NM_003713 NM_004707 NM_005903 NM_006561 NM_006974 NM_007287 NM_007288 NM_007289 NM_007335 NM_007336 NM_007338 NM_012275 NM_012300 NM_013255 NM_015155 NM_015191 NM_016322 NM_016831 NM_017990 NM_018212 NM_020440 NM_020851 NM_031461 NM_031490 NM_032041 NM_032440 NM_033644 NM_033645 NM_052832 NM_052996 NM_145257 NM_152340 NM_153022 NM_173170 NM_177414 NM_183004 NM_199000 NM_201413 NM_201414 NM_203329 NM_203330 NM_203331 NM_203463 XM_370928 XM_379438 XM_495937 XR_000217

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA