VIRsiRNAdb

Predicted off-targets seeds for siRNA "gcuuggguaaggucaucga" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1120.
Total Genes with multiple seed matches: 73.
Genes with at least one seed match: NM_000021 NM_000050 NM_000060 NM_000113 NM_000148 NM_000151 NM_000176 NM_000268 NM_000276 NM_000322 NM_000330 NM_000337 NM_000376 NM_000391 NM_000444 NM_000458 NM_000530 NM_000533 NM_000536 NM_000555 NM_000663 NM_000664 NM_000668 NM_000786 NM_000793 NM_000801 NM_000814 NM_000864 NM_000875 NM_000887 NM_000899 NM_000905 NM_000910 NM_000926 NM_000933 NM_000961 NM_000997 NM_001001188 NM_001001396 NM_001001419 NM_001001420 NM_001001433 NM_001001434 NM_001001437 NM_001001549 NM_001001550 NM_001001555 NM_001001563 NM_001001693 NM_001001698 NM_001001709 NM_001001928 NM_001001929 NM_001001930 NM_001002811 NM_001002812 NM_001002861 NM_001002881 NM_001003688 NM_001003799 NM_001003806 NM_001003891 NM_001004351 NM_001004360 NM_001004434 NM_001005366 NM_001005387 NM_001005751 NM_001005845 NM_001006636 NM_001006656 NM_001007023 NM_001007271 NM_001007272 NM_001007273 NM_001007274 NM_001007275 NM_001007466 NM_001008401 NM_001008407 NM_001008496 NM_001008539 NM_001008563 NM_001008568 NM_001008569 NM_001008570 NM_001008571 NM_001008781 NM_001008917 NM_001009186 NM_001009610 NM_001010000 NM_001010854 NM_001010897 NM_001010910 NM_001010923 NM_001010925 NM_001011545 NM_001012267 NM_001012270 NM_001012271 NM_001012329 NM_001012503 NM_001012642 NM_001012733 NM_001012734 NM_001012968 NM_001012988 NM_001013619 NM_001013629 NM_001013637 NM_001013666 NM_001013675 NM_001013693 NM_001013708 NM_001013713 NM_001014431 NM_001014432 NM_001014440 NM_001017408 NM_001017535 NM_001017919 NM_001017989 NM_001017992 NM_001017995 NM_001018025 NM_001018050 NM_001018051 NM_001018052 NM_001018065 NM_001018066 NM_001018074 NM_001018075 NM_001018076 NM_001018077 NM_001020825 NM_001023562 NM_001023568 NM_001024094 NM_001024380 NM_001024381 NM_001024592 NM_001024808 NM_001024843 NM_001024956 NM_001025076 NM_001025077 NM_001025100 NM_001025193 NM_001083 NM_001116 NM_001117 NM_001168 NM_001194 NM_001243 NM_001251 NM_001256 NM_001267 NM_001278 NM_001286 NM_001324 NM_001356 NM_001365 NM_001386 NM_001432 NM_001457 NM_001558 NM_001587 NM_001609 NM_001624 NM_001634 NM_001684 NM_001690 NM_001694 NM_001732 NM_001759 NM_001762 NM_001830 NM_001853 NM_001897 NM_001925 NM_001931 NM_001932 NM_001969 NM_001987 NM_002010 NM_002025 NM_002071 NM_002074 NM_002080 NM_002111 NM_002126 NM_002148 NM_002226 NM_002236 NM_002290 NM_002293 NM_002406 NM_002564 NM_002594 NM_002625 NM_002649 NM_002693 NM_002719 NM_002725 NM_002750 NM_002822 NM_002879 NM_002912 NM_002927 NM_002957 NM_003001 NM_003012 NM_003046 NM_003070 NM_003135 NM_003137 NM_003155 NM_003165 NM_003177 NM_003185 NM_003190 NM_003202 NM_003214 NM_003234 NM_003281 NM_003439 NM_003444 NM_003458 NM_003498 NM_003574 NM_003576 NM_003590 NM_003605 NM_003636 NM_003646 NM_003658 NM_003687 NM_003714 NM_003734 NM_003763 NM_003782 NM_003816 NM_003818 NM_003846 NM_003889 NM_003900 NM_003918 NM_003926 NM_003958 NM_003966 NM_003994 NM_004024 NM_004078 NM_004093 NM_004124 NM_004171 NM_004200 NM_004227 NM_004262 NM_004277 NM_004311 NM_004321 NM_004370 NM_004397 NM_004437 NM_004481 NM_004488 NM_004537 NM_004615 NM_004619 NM_004742 NM_004781 NM_004784 NM_004846 NM_004907 NM_004931 NM_004938 NM_004959 NM_004973 NM_004977 NM_004992 NM_005036 NM_005041 NM_005069 NM_005098 NM_005137 NM_005163 NM_005170 NM_005197 NM_005220 NM_005245 NM_005268 NM_005270 NM_005291 NM_005311 NM_005338 NM_005370 NM_005398 NM_005429 NM_005440 NM_005494 NM_005558 NM_005583 NM_005604 NM_005649 NM_005680 NM_005688 NM_005729 NM_005872 NM_005873 NM_005900 NM_005903 NM_005907 NM_005938 NM_005986 NM_006091 NM_006132 NM_006166 NM_006184 NM_006187 NM_006191 NM_006202 NM_006259 NM_006290 NM_006315 NM_006322 NM_006336 NM_006371 NM_006373 NM_006377 NM_006390 NM_006456 NM_006481 NM_006492 NM_006560 NM_006561 NM_006572 NM_006615 NM_006624 NM_006640 NM_006658 NM_006676 NM_006699 NM_006704 NM_006729 NM_006738 NM_006742 NM_006748 NM_006772 NM_006803 NM_006833 NM_006890 NM_006918 NM_006944 NM_006969 NM_006984 NM_006999 NM_007011 NM_007021 NM_007030 NM_007106 NM_007107 NM_007110 NM_007118 NM_007171 NM_007174 NM_007200 NM_007271 NM_007318 NM_007319 NM_007331 NM_007335 NM_007336 NM_007338 NM_007345 NM_007353 NM_007371 NM_012072 NM_012142 NM_012233 NM_012271 NM_012297 NM_012301 NM_012309 NM_012314 NM_012392 NM_012425 NM_012445 NM_012465 NM_012481 NM_013230 NM_013282 NM_013296 NM_013937 NM_013989 NM_014055 NM_014080 NM_014143 NM_014235 NM_014236 NM_014240 NM_014293 NM_014350 NM_014405 NM_014489 NM_014494 NM_014505 NM_014517 NM_014556 NM_014631 NM_014754 NM_014772 NM_014801 NM_014803 NM_014809 NM_014835 NM_014854 NM_014914 NM_014945 NM_014946 NM_014951 NM_014953 NM_014975 NM_015022 NM_015033 NM_015040 NM_015066 NM_015074 NM_015085 NM_015088 NM_015093 NM_015107 NM_015111 NM_015134 NM_015170 NM_015192 NM_015193 NM_015202 NM_015213 NM_015246 NM_015247 NM_015267 NM_015282 NM_015288 NM_015355 NM_015378 NM_015381 NM_015428 NM_015488 NM_015518 NM_015569 NM_015570 NM_015600 NM_015713 NM_015886 NM_015889 NM_015980 NM_015981 NM_016002 NM_016073 NM_016115 NM_016138 NM_016174 NM_016255 NM_016257 NM_016263 NM_016275 NM_016282 NM_016364 NM_016376 NM_016418 NM_016452 NM_016523 NM_016544 NM_016603 NM_016621 NM_016735 NM_017413 NM_017415 NM_017451 NM_017548 NM_017563 NM_017585 NM_017588 NM_017660 NM_017750 NM_017752 NM_017778 NM_017791 NM_017798 NM_017799 NM_017802 NM_017811 NM_017850 NM_017852 NM_017858 NM_017873 NM_017968 NM_017986 NM_017990 NM_018024 NM_018038 NM_018040 NM_018089 NM_018156 NM_018157 NM_018182 NM_018199 NM_018211 NM_018228 NM_018248 NM_018252 NM_018292 NM_018347 NM_018367 NM_018439 NM_018607 NM_018652 NM_018660 NM_018948 NM_019006 NM_019013 NM_019085 NM_019087 NM_019110 NM_019841 NM_019895 NM_020037 NM_020038 NM_020133 NM_020141 NM_020208 NM_020231 NM_020245 NM_020248 NM_020338 NM_020399 NM_020429 NM_020451 NM_020639 NM_020640 NM_020686 NM_020708 NM_020774 NM_020792 NM_020804 NM_020830 NM_020866 NM_020868 NM_020886 NM_020993 NM_021006 NM_021094 NM_021104 NM_021111 NM_021117 NM_021132 NM_021155 NM_021163 NM_021164 NM_021222 NM_021249 NM_021252 NM_021267 NM_021735 NM_021736 NM_021737 NM_021820 NM_021905 NM_021912 NM_021942 NM_022002 NM_022049 NM_022135 NM_022342 NM_022405 NM_022455 NM_022466 NM_022572 NM_022755 NM_022770 NM_022773 NM_022781 NM_022784 NM_022817 NM_023112 NM_024028 NM_024052 NM_024109 NM_024298 NM_024513 NM_024541 NM_024546 NM_024571 NM_024612 NM_024622 NM_024653 NM_024659 NM_024685 NM_024738 NM_024740 NM_024783 NM_024854 NM_024894 NM_024935 NM_024938 NM_025063 NM_025090 NM_025219 NM_025243 NM_030379 NM_030380 NM_030381 NM_030574 NM_030622 NM_030655 NM_030916 NM_030927 NM_030929 NM_030972 NM_031272 NM_031279 NM_031283 NM_031304 NM_031305 NM_031437 NM_031439 NM_031480 NM_031910 NM_031936 NM_031940 NM_031961 NM_032016 NM_032028 NM_032145 NM_032227 NM_032266 NM_032279 NM_032291 NM_032310 NM_032311 NM_032432 NM_032446 NM_032452 NM_032479 NM_032509 NM_032513 NM_032515 NM_032538 NM_032578 NM_032582 NM_032590 NM_032682 NM_032717 NM_032727 NM_032728 NM_032753 NM_032770 NM_032801 NM_032838 NM_032853 NM_032900 NM_032957 NM_032958 NM_032959 NM_032974 NM_032988 NM_033013 NM_033034 NM_033084 NM_033161 NM_033332 NM_033393 NM_033430 NM_033437 NM_033544 NM_033640 NM_033655 NM_037370 NM_052821 NM_052878 NM_052900 NM_052938 NM_052970 NM_053023 NM_053029 NM_054012 NM_054027 NM_054111 NM_058178 NM_058183 NM_078473 NM_080429 NM_080552 NM_080617 NM_080645 NM_080665 NM_080723 NM_080744 NM_080819 NM_130830 NM_133175 NM_133176 NM_133332 NM_133334 NM_133445 NM_133448 NM_133625 NM_134422 NM_134423 NM_134424 NM_134431 NM_138298 NM_138338 NM_138358 NM_138360 NM_138402 NM_138461 NM_138572 NM_138701 NM_138774 NM_138775 NM_138926 NM_138934 NM_139018 NM_139045 NM_139046 NM_139068 NM_139069 NM_139207 NM_144498 NM_144719 NM_144766 NM_144767 NM_144778 NM_144969 NM_145117 NM_145159 NM_145187 NM_145188 NM_145189 NM_145190 NM_145250 NM_145257 NM_145316 NM_145323 NM_145324 NM_145342 NM_145349 NM_145351 NM_145734 NM_145759 NM_145863 NM_145896 NM_148171 NM_152233 NM_152235 NM_152253 NM_152259 NM_152280 NM_152282 NM_152334 NM_152382 NM_152402 NM_152470 NM_152515 NM_152536 NM_152595 NM_152611 NM_152638 NM_152686 NM_152689 NM_152690 NM_152724 NM_152771 NM_152774 NM_152787 NM_152793 NM_152831 NM_152924 NM_152939 NM_152942 NM_153005 NM_153246 NM_153264 NM_153320 NM_153360 NM_153375 NM_153379 NM_153442 NM_153607 NM_153685 NM_153695 NM_153717 NM_153836 NM_171825 NM_171982 NM_172024 NM_172099 NM_172130 NM_172349 NM_173060 NM_173466 NM_173532 NM_173551 NM_173651 NM_173661 NM_173794 NM_174901 NM_174911 NM_174917 NM_175064 NM_175711 NM_175736 NM_175883 NM_175898 NM_175900 NM_175901 NM_175907 NM_175913 NM_176071 NM_176072 NM_176811 NM_177427 NM_177999 NM_178026 NM_178126 NM_178136 NM_178140 NM_178151 NM_178152 NM_178153 NM_178225 NM_178226 NM_178228 NM_178505 NM_178516 NM_178519 NM_178520 NM_178565 NM_178586 NM_178835 NM_178842 NM_181349 NM_181457 NM_181458 NM_181459 NM_181460 NM_181504 NM_181523 NM_181524 NM_181654 NM_181705 NM_181784 NM_181785 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181833 NM_181834 NM_181835 NM_181900 NM_182516 NM_182533 NM_182534 NM_182570 NM_182598 NM_182621 NM_182665 NM_182734 NM_182797 NM_182812 NM_182848 NM_182902 NM_182923 NM_182964 NM_182970 NM_182978 NM_183004 NM_183059 NM_183075 NM_183078 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232 NM_194071 NM_194252 NM_194295 NM_194309 NM_194327 NM_194328 NM_194329 NM_194330 NM_194331 NM_194332 NM_194434 NM_194449 NM_198123 NM_198124 NM_198138 NM_198213 NM_198266 NM_198278 NM_198312 NM_198393 NM_198432 NM_198465 NM_198474 NM_198480 NM_198503 NM_198565 NM_198700 NM_198715 NM_198835 NM_198900 NM_198974 NM_199053 NM_199206 NM_199346 NM_199436 NM_199478 NM_201260 NM_201261 NM_201274 NM_201348 NM_201532 NM_201533 NM_201632 NM_201634 NM_203288 NM_203342 NM_203343 NM_203390 NM_203423 NM_203429 NM_203445 NM_203504 NM_203505 NM_206835 NM_206887 NM_206926 NM_207015 NM_207126 NM_207129 NM_207286 NM_207287 NM_207288 NM_207304 NM_207327 NM_207329 NM_207357 NM_207393 NM_207394 NM_207404 NM_207406 NM_207410 NM_207413 NM_207499 NM_207504 NM_207514 NM_212464 NM_212467 NM_213648 XM_032278 XM_034872 XM_038436 XM_039908 XM_044062 XM_044434 XM_047995 XM_051200 XM_059256 XM_084529 XM_085463 XM_085831 XM_086637 XM_097580 XM_113641 XM_114166 XM_168578 XM_290482 XM_290579 XM_290737 XM_294775 XM_294993 XM_297816 XM_298151 XM_351854 XM_370665 XM_370878 XM_371132 XM_371181 XM_371254 XM_371664 XM_371797 XM_371838 XM_371943 XM_372039 XM_372097 XM_372143 XM_372556 XM_373513 XM_373616 XM_373647 XM_373737 XM_373811 XM_374141 XM_374460 XM_374502 XM_374766 XM_375018 XM_375042 XM_375185 XM_375357 XM_376049 XM_376241 XM_376454 XM_376550 XM_378321 XM_378390 XM_378430 XM_378506 XM_378544 XM_378545 XM_378553 XM_378703 XM_378708 XM_378730 XM_378742 XM_378791 XM_378810 XM_378858 XM_378883 XM_378925 XM_379044 XM_379094 XM_379121 XM_379173 XM_379189 XM_379215 XM_379276 XM_379437 XM_379535 XM_379592 XM_379597 XM_379858 XM_380160 XM_495807 XM_495882 XM_495888 XM_496036 XM_496054 XM_496143 XM_496351 XM_496515 XM_496549 XM_496892 XM_496894 XM_496898 XM_496899 XM_496905 XM_496912 XM_497080 XM_498436 XM_498437 XM_498445 XM_498463 XM_498469 XM_498474 XM_498497 XM_498502 XM_498537 XM_498555 XM_498569 XM_498572 XM_498611 XM_498652 XM_498655 XM_498687 XM_498708 XM_498728 XM_498816 XM_498823 XM_498894 XM_498901 XM_498952 XM_498957 XM_498961 XM_498992 XM_499054 XM_499128 XM_499147 XM_499160 XM_499164 XM_499277 XM_499314 XM_499317 XM_499321 XM_499328 XM_499330 XM_499333 XM_499338 XM_499348 XM_499354 XM_499356 XM_499499 XM_499575 XM_499593 XR_000184 XR_000227 XR_000261 XR_000275 XR_000292 XR_000294	Genes with multiple seed matches: NM_000814 NM_001005387 NM_001009610 NM_001018065 NM_001018066 NM_001025076 NM_001025077 NM_002111 NM_002293 NM_002719 NM_003439 NM_003458 NM_003574 NM_003818 NM_004938 NM_004973 NM_005197 NM_005245 NM_006290 NM_006336 NM_006561 NM_007030 NM_007106 NM_007353 NM_012297 NM_014143 NM_015066 NM_015170 NM_016376 NM_016735 NM_017778 NM_018157 NM_020038 NM_020338 NM_021267 NM_021912 NM_024109 NM_024298 NM_030574 NM_032988 NM_145316 NM_145349 NM_145351 NM_153375 NM_171982 NM_177427 NM_178586 NM_181705 NM_181785 NM_181900 NM_182533 NM_182598 NM_194434 NM_203445 NM_203504 NM_203505 NM_207357 NM_207504 NM_212467 XM_038436 XM_051200 XM_084529 XM_374502 XM_379592 XM_495888 XM_496351 XM_498445 XM_498823 XM_498957 XM_499575 XR_000184 XR_000227 XR_000294

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA