VIRsiRNAdb

Predicted off-targets seeds for siRNA "aagacacaaccacuugcgga" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1044.
Total Genes with multiple seed matches: 56.
Genes with at least one seed match: NM_000021 NM_000104 NM_000135 NM_000163 NM_000192 NM_000209 NM_000221 NM_000246 NM_000248 NM_000312 NM_000348 NM_000353 NM_000405 NM_000434 NM_000439 NM_000445 NM_000511 NM_000555 NM_000565 NM_000569 NM_000702 NM_000738 NM_000745 NM_000755 NM_000832 NM_000843 NM_000896 NM_000913 NM_000963 NM_000997 NM_001001396 NM_001001410 NM_001001502 NM_001001675 NM_001001698 NM_001002760 NM_001002761 NM_001002860 NM_001002862 NM_001003407 NM_001003408 NM_001004051 NM_001004054 NM_001004297 NM_001004339 NM_001004355 NM_001004440 NM_001005303 NM_001005359 NM_001005364 NM_001005386 NM_001005388 NM_001005404 NM_001005413 NM_001005414 NM_001005920 NM_001006603 NM_001006665 NM_001007099 NM_001007100 NM_001007139 NM_001007250 NM_001007262 NM_001007525 NM_001007529 NM_001007534 NM_001007546 NM_001008224 NM_001008274 NM_001008393 NM_001008408 NM_001008568 NM_001008569 NM_001008570 NM_001008571 NM_001008738 NM_001008739 NM_001008781 NM_001010846 NM_001010867 NM_001010972 NM_001010989 NM_001010990 NM_001011718 NM_001012239 NM_001012502 NM_001012642 NM_001012727 NM_001013633 NM_001013634 NM_001013640 NM_001013649 NM_001013650 NM_001013671 NM_001013696 NM_001013707 NM_001013712 NM_001013713 NM_001013726 NM_001014283 NM_001014374 NM_001014380 NM_001015885 NM_001015887 NM_001017523 NM_001017916 NM_001017917 NM_001017918 NM_001017965 NM_001017995 NM_001018054 NM_001018061 NM_001018062 NM_001018072 NM_001018097 NM_001018116 NM_001023565 NM_001024457 NM_001024649 NM_001024674 NM_001024843 NM_001025100 NM_001025107 NM_001038 NM_001043 NM_001049 NM_001080 NM_001103 NM_001109 NM_001111 NM_001186 NM_001206 NM_001238 NM_001243 NM_001257 NM_001304 NM_001306 NM_001348 NM_001389 NM_001390 NM_001395 NM_001440 NM_001451 NM_001455 NM_001497 NM_001537 NM_001556 NM_001567 NM_001614 NM_001621 NM_001668 NM_001678 NM_001684 NM_001746 NM_001761 NM_001826 NM_001879 NM_001896 NM_001905 NM_001915 NM_002055 NM_002068 NM_002074 NM_002080 NM_002095 NM_002111 NM_002143 NM_002147 NM_002228 NM_002299 NM_002309 NM_002313 NM_002318 NM_002355 NM_002359 NM_002383 NM_002406 NM_002416 NM_002460 NM_002531 NM_002581 NM_002590 NM_002595 NM_002616 NM_002631 NM_002634 NM_002664 NM_002702 NM_002714 NM_002817 NM_002843 NM_002868 NM_002929 NM_002953 NM_002957 NM_002959 NM_002975 NM_002979 NM_003055 NM_003057 NM_003085 NM_003142 NM_003274 NM_003317 NM_003413 NM_003435 NM_003458 NM_003461 NM_003466 NM_003496 NM_003498 NM_003577 NM_003605 NM_003610 NM_003681 NM_003713 NM_003714 NM_003724 NM_003751 NM_003792 NM_003796 NM_003811 NM_003890 NM_003936 NM_003939 NM_003943 NM_003950 NM_003953 NM_003961 NM_003966 NM_004003 NM_004058 NM_004061 NM_004171 NM_004204 NM_004210 NM_004227 NM_004261 NM_004273 NM_004286 NM_004290 NM_004335 NM_004339 NM_004358 NM_004382 NM_004386 NM_004405 NM_004414 NM_004437 NM_004438 NM_004442 NM_004451 NM_004481 NM_004513 NM_004518 NM_004535 NM_004550 NM_004588 NM_004628 NM_004631 NM_004663 NM_004678 NM_004729 NM_004742 NM_004776 NM_004778 NM_004781 NM_004802 NM_004914 NM_004931 NM_004982 NM_005044 NM_005069 NM_005093 NM_005118 NM_005126 NM_005188 NM_005189 NM_005220 NM_005312 NM_005318 NM_005334 NM_005378 NM_005396 NM_005413 NM_005417 NM_005434 NM_005463 NM_005465 NM_005479 NM_005498 NM_005506 NM_005537 NM_005715 NM_005722 NM_005724 NM_005745 NM_005842 NM_005843 NM_005867 NM_005883 NM_005964 NM_005969 NM_006060 NM_006237 NM_006305 NM_006329 NM_006335 NM_006351 NM_006352 NM_006403 NM_006412 NM_006421 NM_006428 NM_006454 NM_006456 NM_006465 NM_006481 NM_006488 NM_006538 NM_006546 NM_006591 NM_006624 NM_006696 NM_006701 NM_006720 NM_006722 NM_006795 NM_006908 NM_006925 NM_006999 NM_007054 NM_007057 NM_007068 NM_007107 NM_007236 NM_007247 NM_007250 NM_007256 NM_007262 NM_007301 NM_007306 NM_007318 NM_007327 NM_007335 NM_007336 NM_007338 NM_009589 NM_012074 NM_012094 NM_012130 NM_012186 NM_012248 NM_012256 NM_012292 NM_012325 NM_012405 NM_012436 NM_013248 NM_013332 NM_013345 NM_013385 NM_013437 NM_013951 NM_013952 NM_013953 NM_013992 NM_013995 NM_014001 NM_014023 NM_014033 NM_014109 NM_014112 NM_014171 NM_014211 NM_014228 NM_014233 NM_014286 NM_014314 NM_014316 NM_014400 NM_014421 NM_014571 NM_014674 NM_014682 NM_014685 NM_014704 NM_014712 NM_014728 NM_014731 NM_014733 NM_014735 NM_014737 NM_014739 NM_014760 NM_014786 NM_014792 NM_014801 NM_014851 NM_014867 NM_014912 NM_014924 NM_015033 NM_015035 NM_015039 NM_015059 NM_015071 NM_015085 NM_015088 NM_015090 NM_015099 NM_015101 NM_015130 NM_015144 NM_015149 NM_015155 NM_015173 NM_015176 NM_015178 NM_015191 NM_015229 NM_015254 NM_015265 NM_015266 NM_015305 NM_015313 NM_015315 NM_015338 NM_015353 NM_015378 NM_015404 NM_015429 NM_015438 NM_015453 NM_015511 NM_015518 NM_015560 NM_015683 NM_015840 NM_015841 NM_015892 NM_015902 NM_015948 NM_015950 NM_015995 NM_016018 NM_016028 NM_016066 NM_016080 NM_016090 NM_016096 NM_016190 NM_016224 NM_016240 NM_016263 NM_016277 NM_016376 NM_016530 NM_016575 NM_016598 NM_017415 NM_017444 NM_017522 NM_017551 NM_017621 NM_017623 NM_017717 NM_017773 NM_017776 NM_017778 NM_017811 NM_017824 NM_017863 NM_017872 NM_017896 NM_017943 NM_017944 NM_017946 NM_017952 NM_017957 NM_017966 NM_017979 NM_017990 NM_018003 NM_018013 NM_018019 NM_018037 NM_018089 NM_018090 NM_018106 NM_018121 NM_018156 NM_018185 NM_018198 NM_018322 NM_018347 NM_018400 NM_018607 NM_018650 NM_018712 NM_018842 NM_018890 NM_018936 NM_019042 NM_019046 NM_019107 NM_020127 NM_020132 NM_020139 NM_020151 NM_020162 NM_020170 NM_020198 NM_020374 NM_020415 NM_020428 NM_020462 NM_020465 NM_020482 NM_020639 NM_020710 NM_020776 NM_020777 NM_020781 NM_020786 NM_020795 NM_020850 NM_020904 NM_020914 NM_020954 NM_020956 NM_020962 NM_020972 NM_021079 NM_021130 NM_021146 NM_021174 NM_021183 NM_021205 NM_021224 NM_021569 NM_021635 NM_021808 NM_021872 NM_021873 NM_021874 NM_021961 NM_021965 NM_021996 NM_022095 NM_022116 NM_022117 NM_022307 NM_022333 NM_022371 NM_022444 NM_022744 NM_022766 NM_022822 NM_022831 NM_022833 NM_022842 NM_022910 NM_023002 NM_023947 NM_024072 NM_024092 NM_024309 NM_024337 NM_024516 NM_024551 NM_024569 NM_024587 NM_024590 NM_024627 NM_024633 NM_024649 NM_024701 NM_024704 NM_024742 NM_024759 NM_024763 NM_024791 NM_024804 NM_024830 NM_024910 NM_024911 NM_024915 NM_024921 NM_024922 NM_024938 NM_024986 NM_025002 NM_025048 NM_025136 NM_025146 NM_025216 NM_025222 NM_025225 NM_025251 NM_030626 NM_030629 NM_030643 NM_030655 NM_030665 NM_030777 NM_030792 NM_030895 NM_030916 NM_030968 NM_031282 NM_031310 NM_031417 NM_031424 NM_031432 NM_031476 NM_031482 NM_031492 NM_031904 NM_032015 NM_032028 NM_032108 NM_032116 NM_032124 NM_032153 NM_032219 NM_032276 NM_032333 NM_032350 NM_032432 NM_032525 NM_032581 NM_032711 NM_032797 NM_032800 NM_032848 NM_032873 NM_032906 NM_032933 NM_032949 NM_032975 NM_032980 NM_032997 NM_033088 NM_033215 NM_033224 NM_033300 NM_033364 NM_033397 NM_033551 NM_033637 NM_052813 NM_052876 NM_052910 NM_052916 NM_052925 NM_052933 NM_052936 NM_052972 NM_053029 NM_057177 NM_057182 NM_080550 NM_080552 NM_080590 NM_080717 NM_080730 NM_080731 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837 NM_133266 NM_133334 NM_133372 NM_133452 NM_133459 NM_133462 NM_133473 NM_133474 NM_133476 NM_133498 NM_133639 NM_134447 NM_138298 NM_138384 NM_138400 NM_138437 NM_138619 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138687 NM_139159 NM_139161 NM_139267 NM_139321 NM_144492 NM_144609 NM_144610 NM_144641 NM_144665 NM_144717 NM_144726 NM_144736 NM_144782 NM_144999 NM_145011 NM_145115 NM_145231 NM_145276 NM_145285 NM_145286 NM_145313 NM_145660 NM_145699 NM_147195 NM_152253 NM_152317 NM_152322 NM_152384 NM_152389 NM_152483 NM_152538 NM_152568 NM_152609 NM_152778 NM_152783 NM_152832 NM_152942 NM_153008 NM_153033 NM_153187 NM_153229 NM_153239 NM_153261 NM_153487 NM_153683 NM_170686 NM_170705 NM_170706 NM_170716 NM_170717 NM_170740 NM_170773 NM_170774 NM_172000 NM_172099 NM_172217 NM_172239 NM_172373 NM_173354 NM_173463 NM_173465 NM_173555 NM_173558 NM_173602 NM_173644 NM_173660 NM_173661 NM_173669 NM_173675 NM_173680 NM_173683 NM_173804 NM_173817 NM_173849 NM_174882 NM_175061 NM_175569 NM_175709 NM_175864 NM_175908 NM_175932 NM_177414 NM_177963 NM_177968 NM_178011 NM_178034 NM_178151 NM_178152 NM_178153 NM_178173 NM_178225 NM_178226 NM_178232 NM_178270 NM_178271 NM_178426 NM_178427 NM_178507 NM_178514 NM_178520 NM_178820 NM_178838 NM_178842 NM_181353 NM_181355 NM_181359 NM_181486 NM_181651 NM_181652 NM_181672 NM_181673 NM_181784 NM_181836 NM_182487 NM_182495 NM_182508 NM_182583 NM_182612 NM_182613 NM_182623 NM_182647 NM_182661 NM_182712 NM_182757 NM_182759 NM_182795 NM_182798 NM_182799 NM_182801 NM_182830 NM_183227 NM_183359 NM_183398 NM_183399 NM_183400 NM_183401 NM_194248 NM_194284 NM_194294 NM_194295 NM_194309 NM_194322 NM_194323 NM_197941 NM_197962 NM_197964 NM_198158 NM_198159 NM_198177 NM_198178 NM_198217 NM_198218 NM_198219 NM_198253 NM_198254 NM_198291 NM_198390 NM_198440 NM_198445 NM_198452 NM_198458 NM_198484 NM_198542 NM_198549 NM_198571 NM_198593 NM_198594 NM_198679 NM_198682 NM_198829 NM_198902 NM_199078 NM_199205 NM_199242 NM_201280 NM_201378 NM_201379 NM_201380 NM_201381 NM_201382 NM_201383 NM_201384 NM_201399 NM_201559 NM_201633 NM_203341 NM_203342 NM_203343 NM_203395 NM_203400 NM_203417 NM_203418 NM_203422 NM_203423 NM_203430 NM_203431 NM_205768 NM_206866 NM_206887 NM_207003 NM_207121 NM_207125 NM_207126 NM_207127 NM_207129 NM_207324 NM_207326 NM_207366 NM_207371 NM_207434 NM_207442 NM_207472 NM_207495 NM_207581 NM_207644 NM_212530 NM_212552 NM_214710 XM_027236 XM_032278 XM_032901 XM_032996 XM_037523 XM_038436 XM_042698 XM_045290 XM_047550 XM_047554 XM_051017 XM_059037 XM_087384 XM_114621 XM_117408 XM_166140 XM_210860 XM_210908 XM_290342 XM_290737 XM_290941 XM_292717 XM_294261 XM_298151 XM_371176 XM_371286 XM_371680 XM_371848 XM_372248 XM_372267 XM_373561 XM_373578 XM_373749 XM_373786 XM_374586 XM_374781 XM_375174 XM_375183 XM_375491 XM_375697 XM_376558 XM_376658 XM_376679 XM_378219 XM_378236 XM_378238 XM_378239 XM_378299 XM_378356 XM_378434 XM_378436 XM_378546 XM_378549 XM_378653 XM_378692 XM_378738 XM_378777 XM_378823 XM_378883 XM_378925 XM_378946 XM_378949 XM_379023 XM_379075 XM_379096 XM_379100 XM_379135 XM_379136 XM_379249 XM_379339 XM_379452 XM_379501 XM_379507 XM_379510 XM_379597 XM_379629 XM_379665 XM_379702 XM_379897 XM_379933 XM_380103 XM_380120 XM_380128 XM_380131 XM_380171 XM_495933 XM_495937 XM_495939 XM_495950 XM_496044 XM_496054 XM_496151 XM_496161 XM_496361 XM_496907 XM_497080 XM_498446 XM_498465 XM_498469 XM_498497 XM_498540 XM_498557 XM_498683 XM_498814 XM_498825 XM_498883 XM_498910 XM_498912 XM_498992 XM_499047 XM_499050 XM_499093 XM_499105 XM_499106 XM_499130 XM_499161 XM_499182 XM_499185 XM_499343 XM_499362 XM_499552 XM_499595 XR_000190 XR_000227 XR_000273 XR_000275	Genes with multiple seed matches: NM_001013649 NM_001013726 NM_001017523 NM_001018072 NM_001390 NM_002074 NM_002359 NM_004273 NM_004438 NM_004513 NM_004518 NM_005312 NM_005318 NM_006538 NM_006999 NM_012256 NM_017872 NM_018185 NM_020914 NM_022117 NM_022766 NM_024309 NM_024551 NM_024742 NM_024922 NM_030629 NM_030643 NM_030665 NM_032711 NM_032975 NM_032980 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_139321 NM_145660 NM_152322 NM_152389 NM_153239 NM_172217 NM_175709 NM_182661 NM_198390 NM_198679 NM_207003 XM_292717 XM_374781 XM_375491 XM_376658 XM_379075 XM_379897 XM_380131

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA