VIRsiRNAdb

Predicted off-targets seeds for siRNA "uuuggaagagaaaccguua" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1100.
Total Genes with multiple seed matches: 60.
Genes with at least one seed match: NM_000021 NM_000071 NM_000076 NM_000113 NM_000122 NM_000125 NM_000133 NM_000150 NM_000237 NM_000332 NM_000378 NM_000391 NM_000405 NM_000429 NM_000451 NM_000480 NM_000503 NM_000509 NM_000522 NM_000569 NM_000610 NM_000617 NM_000629 NM_000684 NM_000719 NM_000721 NM_000732 NM_000782 NM_000809 NM_000814 NM_000818 NM_000844 NM_000876 NM_000882 NM_000899 NM_000901 NM_000902 NM_000956 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001001395 NM_001001435 NM_001001481 NM_001001482 NM_001001557 NM_001001669 NM_001001713 NM_001001873 NM_001001974 NM_001001994 NM_001001996 NM_001002032 NM_001002033 NM_001002295 NM_001002860 NM_001002877 NM_001002878 NM_001002879 NM_001002926 NM_001003652 NM_001003665 NM_001003674 NM_001003675 NM_001003698 NM_001003699 NM_001003794 NM_001003796 NM_001003845 NM_001004707 NM_001005336 NM_001005387 NM_001005388 NM_001005463 NM_001005502 NM_001005915 NM_001006624 NM_001006625 NM_001006656 NM_001006657 NM_001007156 NM_001008224 NM_001008239 NM_001008390 NM_001008564 NM_001008738 NM_001008801 NM_001008860 NM_001008892 NM_001008894 NM_001009992 NM_001009993 NM_001012329 NM_001012415 NM_001012514 NM_001012516 NM_001012755 NM_001012761 NM_001012958 NM_001012977 NM_001012981 NM_001013670 NM_001013693 NM_001013708 NM_001013723 NM_001014283 NM_001017408 NM_001017440 NM_001017980 NM_001018056 NM_001018112 NM_001020818 NM_001020819 NM_001020820 NM_001020821 NM_001023563 NM_001024808 NM_001024847 NM_001025077 NM_001025079 NM_001025080 NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025100 NM_001025101 NM_001025108 NM_001025109 NM_001025247 NM_001025252 NM_001025253 NM_001025266 NM_001121 NM_001167 NM_001203 NM_001243 NM_001257 NM_001431 NM_001432 NM_001440 NM_001455 NM_001468 NM_001490 NM_001491 NM_001585 NM_001642 NM_001674 NM_001676 NM_001690 NM_001702 NM_001717 NM_001766 NM_001773 NM_001777 NM_001809 NM_001830 NM_001846 NM_001858 NM_001874 NM_001895 NM_001905 NM_001963 NM_001987 NM_002026 NM_002051 NM_002077 NM_002135 NM_002175 NM_002188 NM_002193 NM_002253 NM_002261 NM_002285 NM_002299 NM_002359 NM_002385 NM_002442 NM_002473 NM_002613 NM_002649 NM_002657 NM_002666 NM_002715 NM_002731 NM_002734 NM_002738 NM_002751 NM_002756 NM_002819 NM_002829 NM_002848 NM_002869 NM_002891 NM_002955 NM_002987 NM_002993 NM_002998 NM_003009 NM_003010 NM_003024 NM_003029 NM_003045 NM_003058 NM_003099 NM_003106 NM_003112 NM_003178 NM_003188 NM_003200 NM_003215 NM_003242 NM_003275 NM_003298 NM_003327 NM_003363 NM_003371 NM_003383 NM_003387 NM_003409 NM_003455 NM_003489 NM_003507 NM_003644 NM_003654 NM_003663 NM_003678 NM_003759 NM_003895 NM_003898 NM_003908 NM_003929 NM_003947 NM_003966 NM_003971 NM_003983 NM_003994 NM_004024 NM_004055 NM_004223 NM_004227 NM_004308 NM_004315 NM_004322 NM_004326 NM_004331 NM_004337 NM_004338 NM_004369 NM_004373 NM_004385 NM_004408 NM_004414 NM_004437 NM_004446 NM_004449 NM_004485 NM_004503 NM_004504 NM_004535 NM_004556 NM_004571 NM_004576 NM_004578 NM_004612 NM_004621 NM_004625 NM_004639 NM_004745 NM_004748 NM_004772 NM_004795 NM_004796 NM_004804 NM_004860 NM_004893 NM_004894 NM_004896 NM_004900 NM_004947 NM_004955 NM_005008 NM_005079 NM_005105 NM_005109 NM_005112 NM_005180 NM_005188 NM_005191 NM_005238 NM_005278 NM_005334 NM_005359 NM_005398 NM_005476 NM_005539 NM_005578 NM_005604 NM_005668 NM_005670 NM_005688 NM_005708 NM_005736 NM_005739 NM_005811 NM_005828 NM_005843 NM_005862 NM_005899 NM_005901 NM_005905 NM_005915 NM_005931 NM_005953 NM_005957 NM_005966 NM_005971 NM_005981 NM_006011 NM_006048 NM_006051 NM_006067 NM_006133 NM_006144 NM_006151 NM_006186 NM_006195 NM_006237 NM_006283 NM_006289 NM_006306 NM_006312 NM_006315 NM_006371 NM_006380 NM_006387 NM_006465 NM_006474 NM_006500 NM_006547 NM_006622 NM_006675 NM_006678 NM_006732 NM_006748 NM_006752 NM_006754 NM_006775 NM_006805 NM_006827 NM_006873 NM_006888 NM_006895 NM_006959 NM_006989 NM_007000 NM_007106 NM_007150 NM_007184 NM_007211 NM_007236 NM_007247 NM_007257 NM_007283 NM_007287 NM_007288 NM_007289 NM_007306 NM_007341 NM_012071 NM_012074 NM_012087 NM_012174 NM_012231 NM_012287 NM_012296 NM_012301 NM_012307 NM_012309 NM_012392 NM_012408 NM_012409 NM_012419 NM_012421 NM_012424 NM_013231 NM_013233 NM_013252 NM_013260 NM_013276 NM_013279 NM_013280 NM_013282 NM_013302 NM_013332 NM_013352 NM_013354 NM_013364 NM_013433 NM_013995 NM_014089 NM_014106 NM_014191 NM_014212 NM_014216 NM_014243 NM_014275 NM_014286 NM_014296 NM_014335 NM_014342 NM_014343 NM_014358 NM_014399 NM_014400 NM_014415 NM_014468 NM_014484 NM_014495 NM_014504 NM_014506 NM_014556 NM_014585 NM_014595 NM_014607 NM_014611 NM_014615 NM_014661 NM_014720 NM_014746 NM_014755 NM_014757 NM_014787 NM_014792 NM_014807 NM_014821 NM_014851 NM_014854 NM_014872 NM_014899 NM_014963 NM_014988 NM_015000 NM_015009 NM_015027 NM_015056 NM_015064 NM_015090 NM_015094 NM_015101 NM_015113 NM_015140 NM_015161 NM_015194 NM_015216 NM_015226 NM_015229 NM_015266 NM_015267 NM_015288 NM_015317 NM_015318 NM_015326 NM_015387 NM_015393 NM_015404 NM_015409 NM_015428 NM_015455 NM_015534 NM_015569 NM_015855 NM_015949 NM_015993 NM_015995 NM_016019 NM_016022 NM_016034 NM_016062 NM_016072 NM_016094 NM_016114 NM_016147 NM_016185 NM_016201 NM_016235 NM_016245 NM_016250 NM_016271 NM_016376 NM_016389 NM_016436 NM_016472 NM_016522 NM_016534 NM_016542 NM_016575 NM_016628 NM_016824 NM_016932 NM_016936 NM_017423 NM_017491 NM_017527 NM_017546 NM_017555 NM_017563 NM_017575 NM_017614 NM_017628 NM_017647 NM_017694 NM_017744 NM_017751 NM_017772 NM_017798 NM_017799 NM_017817 NM_017850 NM_017861 NM_017938 NM_017943 NM_017951 NM_017969 NM_018003 NM_018048 NM_018092 NM_018117 NM_018126 NM_018169 NM_018185 NM_018242 NM_018246 NM_018299 NM_018300 NM_018381 NM_018400 NM_018439 NM_018450 NM_018462 NM_018475 NM_018482 NM_018490 NM_018566 NM_018640 NM_018652 NM_018658 NM_018702 NM_018715 NM_018847 NM_018891 NM_018976 NM_018999 NM_019027 NM_019036 NM_019067 NM_019083 NM_019094 NM_019098 NM_019106 NM_019845 NM_019854 NM_019892 NM_019894 NM_019903 NM_020066 NM_020125 NM_020148 NM_020178 NM_020199 NM_020248 NM_020312 NM_020378 NM_020381 NM_020399 NM_020416 NM_020432 NM_020438 NM_020444 NM_020546 NM_020648 NM_020673 NM_020708 NM_020713 NM_020727 NM_020739 NM_020746 NM_020750 NM_020773 NM_020779 NM_020796 NM_020802 NM_020830 NM_020839 NM_020894 NM_020909 NM_020918 NM_020931 NM_020992 NM_020993 NM_021095 NM_021159 NM_021168 NM_021216 NM_021219 NM_021220 NM_021620 NM_021622 NM_021624 NM_021783 NM_021814 NM_021910 NM_021912 NM_022049 NM_022112 NM_022114 NM_022307 NM_022493 NM_022567 NM_022725 NM_022733 NM_022766 NM_022779 NM_022893 NM_022898 NM_023088 NM_023938 NM_024060 NM_024072 NM_024109 NM_024295 NM_024334 NM_024424 NM_024425 NM_024426 NM_024430 NM_024512 NM_024541 NM_024556 NM_024602 NM_024636 NM_024646 NM_024698 NM_024704 NM_024745 NM_024757 NM_024761 NM_024791 NM_024813 NM_024841 NM_024865 NM_024889 NM_024891 NM_024896 NM_024915 NM_024946 NM_025059 NM_025090 NM_025224 NM_030579 NM_030582 NM_030633 NM_030650 NM_030665 NM_030667 NM_030668 NM_030669 NM_030670 NM_030671 NM_030791 NM_030797 NM_030806 NM_030814 NM_030915 NM_030922 NM_030926 NM_030972 NM_031268 NM_031468 NM_031474 NM_031858 NM_031862 NM_031910 NM_031913 NM_031922 NM_031954 NM_031990 NM_031991 NM_032141 NM_032144 NM_032153 NM_032222 NM_032271 NM_032521 NM_032581 NM_032663 NM_032706 NM_032711 NM_032737 NM_032753 NM_032826 NM_032827 NM_032831 NM_032853 NM_032883 NM_032886 NM_032946 NM_032989 NM_033017 NM_033053 NM_033083 NM_033090 NM_033091 NM_033152 NM_033153 NM_033154 NM_033155 NM_033222 NM_033224 NM_033274 NM_033282 NM_033387 NM_033389 NM_033397 NM_033505 NM_052861 NM_052867 NM_052906 NM_052928 NM_052932 NM_052938 NM_053046 NM_053053 NM_053056 NM_054013 NM_054027 NM_054110 NM_057164 NM_057165 NM_057166 NM_057167 NM_080429 NM_080491 NM_080550 NM_080650 NM_080702 NM_080703 NM_080732 NM_080820 NM_080862 NM_080867 NM_080872 NM_100264 NM_100486 NM_130441 NM_130444 NM_130445 NM_130809 NM_133172 NM_133173 NM_133174 NM_133175 NM_133176 NM_133372 NM_134264 NM_134444 NM_138348 NM_138373 NM_138428 NM_138492 NM_138576 NM_138609 NM_138610 NM_138701 NM_138726 NM_138727 NM_138728 NM_138813 NM_138967 NM_138970 NM_139162 NM_139245 NM_144608 NM_144613 NM_144661 NM_144727 NM_144982 NM_144991 NM_144994 NM_145012 NM_145035 NM_145055 NM_145109 NM_145110 NM_145169 NM_145200 NM_145239 NM_145331 NM_145332 NM_145333 NM_145649 NM_145651 NM_145655 NM_145699 NM_145794 NM_145795 NM_145798 NM_145893 NM_147200 NM_147686 NM_148170 NM_148886 NM_148955 NM_152263 NM_152270 NM_152275 NM_152301 NM_152333 NM_152337 NM_152340 NM_152418 NM_152453 NM_152615 NM_152641 NM_152704 NM_152716 NM_152826 NM_152834 NM_152942 NM_152990 NM_153031 NM_153034 NM_153191 NM_153215 NM_153263 NM_153345 NM_153348 NM_153683 NM_153691 NM_153693 NM_153815 NM_153825 NM_153837 NM_170741 NM_170742 NM_170743 NM_172058 NM_172059 NM_172060 NM_173064 NM_173065 NM_173157 NM_173171 NM_173172 NM_173173 NM_173463 NM_173484 NM_173509 NM_173580 NM_173629 NM_173631 NM_173647 NM_173654 NM_173851 NM_174892 NM_174900 NM_174911 NM_174972 NM_175709 NM_175847 NM_175872 NM_175892 NM_175907 NM_176823 NM_177401 NM_177427 NM_177537 NM_177559 NM_177560 NM_177924 NM_178025 NM_178037 NM_178038 NM_178039 NM_178040 NM_178129 NM_178177 NM_178191 NM_178514 NM_181351 NM_181481 NM_181482 NM_181483 NM_181491 NM_181581 NM_181674 NM_181675 NM_181676 NM_181677 NM_181678 NM_181708 NM_181711 NM_181787 NM_181826 NM_181827 NM_181847 NM_181874 NM_181876 NM_182527 NM_182540 NM_182568 NM_182579 NM_182598 NM_182612 NM_182661 NM_182715 NM_182918 NM_182948 NM_182960 NM_182970 NM_183047 NM_183048 NM_183050 NM_183238 NM_183247 NM_194285 NM_194310 NM_197976 NM_198128 NM_198183 NM_198201 NM_198320 NM_198327 NM_198328 NM_198389 NM_198485 NM_198490 NM_198581 NM_198793 NM_198843 NM_198851 NM_198896 NM_198990 NM_198992 NM_199040 NM_199050 NM_199054 NM_199072 NM_199132 NM_199138 NM_199339 NM_199421 NM_199443 NM_199453 NM_199454 NM_199482 NM_201280 NM_201283 NM_201432 NM_201433 NM_201535 NM_201536 NM_201537 NM_201538 NM_201539 NM_201540 NM_201541 NM_201559 NM_203342 NM_203343 NM_203417 NM_203418 NM_203446 NM_203451 NM_203463 NM_203503 NM_203510 NM_205846 NM_206835 NM_207007 NM_207035 NM_207283 NM_207397 NM_207419 NM_207454 NM_207460 NM_207472 NM_207479 NM_207489 NM_207495 NM_207645 NM_207646 NM_212471 NM_212472 NM_212474 NM_212475 NM_212476 NM_212478 NM_212482 NM_212558 NM_213568 NM_213589 NM_213598 NM_213609 NM_214462 XM_027236 XM_032278 XM_037523 XM_038436 XM_039676 XM_039908 XM_042833 XM_043493 XM_047355 XM_049237 XM_051017 XM_057107 XM_058628 XM_069842 XM_085831 XM_113967 XM_166132 XM_209607 XM_211287 XM_211853 XM_290579 XM_290734 XM_292357 XM_294521 XM_294854 XM_370849 XM_370876 XM_371801 XM_373498 XM_373742 XM_373786 XM_373973 XM_374112 XM_375373 XM_375803 XM_376165 XM_376412 XM_376586 XM_376602 XM_376616 XM_376679 XM_378178 XM_378301 XM_378367 XM_378542 XM_378625 XM_378706 XM_378735 XM_378798 XM_378860 XM_378914 XM_379243 XM_379535 XM_379605 XM_379622 XM_379665 XM_379798 XM_379820 XM_379843 XM_379844 XM_379933 XM_380042 XM_380160 XM_495939 XM_495950 XM_496076 XM_496134 XM_496143 XM_496145 XM_496163 XM_496183 XM_496351 XM_496608 XM_498464 XM_498497 XM_498525 XM_498563 XM_498614 XM_498620 XM_498625 XM_498768 XM_498771 XM_498958 XM_499003 XM_499020 XM_499084 XM_499130 XM_499153 XM_499154 XM_499160 XM_499182 XM_499539 XM_499594	Genes with multiple seed matches: NM_000378 NM_000391 NM_000617 NM_001006624 NM_001006625 NM_001009993 NM_001013670 NM_001025079 NM_001025080 NM_001491 NM_001777 NM_001858 NM_003371 NM_004571 NM_004745 NM_005238 NM_005578 NM_005739 NM_005862 NM_006380 NM_006465 NM_006474 NM_007306 NM_014415 NM_015064 NM_015267 NM_016114 NM_018381 NM_018400 NM_018976 NM_019892 NM_020746 NM_020802 NM_022898 NM_024424 NM_024425 NM_024426 NM_024512 NM_025224 NM_030633 NM_030791 NM_030806 NM_032737 NM_052928 NM_138576 NM_144661 NM_145649 NM_145655 NM_178037 NM_178038 NM_178039 NM_178040 NM_178191 NM_181787 NM_198389 NM_198793 XM_047355 XM_379243 XM_498464 XM_499594

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA