VIRsiRNAdb

Predicted off-targets seeds for siRNA "acgccuauccaugacgcaa" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1067.
Total Genes with multiple seed matches: 63.
Genes with at least one seed match: NM_000033 NM_000037 NM_000086 NM_000090 NM_000092 NM_000172 NM_000189 NM_000216 NM_000248 NM_000262 NM_000301 NM_000303 NM_000332 NM_000351 NM_000368 NM_000402 NM_000430 NM_000451 NM_000486 NM_000512 NM_000554 NM_000573 NM_000621 NM_000651 NM_000664 NM_000744 NM_000757 NM_000778 NM_000788 NM_000795 NM_000814 NM_000821 NM_000876 NM_000924 NM_000983 NM_001001188 NM_001001344 NM_001001438 NM_001001557 NM_001001668 NM_001001707 NM_001001791 NM_001001890 NM_001001895 NM_001001927 NM_001001928 NM_001001929 NM_001001930 NM_001001938 NM_001002034 NM_001002762 NM_001002814 NM_001002843 NM_001003399 NM_001003656 NM_001003674 NM_001003675 NM_001003676 NM_001003677 NM_001003891 NM_001004319 NM_001004325 NM_001004356 NM_001004358 NM_001004433 NM_001004439 NM_001004720 NM_001004722 NM_001005387 NM_001005463 NM_001005736 NM_001006641 NM_001006642 NM_001006643 NM_001007237 NM_001007538 NM_001008390 NM_001008537 NM_001008563 NM_001008895 NM_001009566 NM_001009880 NM_001010866 NM_001010898 NM_001010980 NM_001011513 NM_001011514 NM_001012267 NM_001012270 NM_001012271 NM_001012727 NM_001013619 NM_001013633 NM_001013639 NM_001013667 NM_001013673 NM_001013696 NM_001013698 NM_001013718 NM_001013724 NM_001013845 NM_001014987 NM_001014988 NM_001014989 NM_001017395 NM_001017972 NM_001018003 NM_001018055 NM_001018061 NM_001018062 NM_001023565 NM_001023566 NM_001024226 NM_001024227 NM_001024228 NM_001024401 NM_001024599 NM_001024808 NM_001024843 NM_001024858 NM_001025076 NM_001025077 NM_001025081 NM_001025090 NM_001025092 NM_001025094 NM_001025098 NM_001025101 NM_001044 NM_001092 NM_001094 NM_001095 NM_001117 NM_001135 NM_001168 NM_001196 NM_001224 NM_001233 NM_001299 NM_001306 NM_001319 NM_001387 NM_001419 NM_001420 NM_001451 NM_001535 NM_001542 NM_001556 NM_001562 NM_001626 NM_001630 NM_001636 NM_001658 NM_001718 NM_001754 NM_001791 NM_001835 NM_001845 NM_001846 NM_001908 NM_001936 NM_001941 NM_002019 NM_002068 NM_002088 NM_002105 NM_002152 NM_002193 NM_002226 NM_002234 NM_002242 NM_002243 NM_002314 NM_002319 NM_002357 NM_002385 NM_002424 NM_002441 NM_002479 NM_002560 NM_002566 NM_002586 NM_002593 NM_002617 NM_002653 NM_002662 NM_002698 NM_002705 NM_002725 NM_002737 NM_002834 NM_002850 NM_002911 NM_002956 NM_002957 NM_003004 NM_003033 NM_003045 NM_003068 NM_003082 NM_003098 NM_003108 NM_003130 NM_003151 NM_003199 NM_003221 NM_003236 NM_003239 NM_003247 NM_003307 NM_003389 NM_003409 NM_003422 NM_003458 NM_003490 NM_003498 NM_003524 NM_003581 NM_003587 NM_003589 NM_003605 NM_003626 NM_003631 NM_003663 NM_003713 NM_003739 NM_003740 NM_003742 NM_003748 NM_003749 NM_003759 NM_003764 NM_003822 NM_003842 NM_003933 NM_003950 NM_003955 NM_004037 NM_004099 NM_004124 NM_004142 NM_004145 NM_004155 NM_004338 NM_004342 NM_004390 NM_004414 NM_004431 NM_004516 NM_004536 NM_004566 NM_004571 NM_004612 NM_004630 NM_004687 NM_004729 NM_004750 NM_004762 NM_004772 NM_004821 NM_004842 NM_004854 NM_004893 NM_004923 NM_004970 NM_005018 NM_005036 NM_005098 NM_005157 NM_005191 NM_005194 NM_005197 NM_005218 NM_005231 NM_005249 NM_005329 NM_005334 NM_005392 NM_005433 NM_005520 NM_005561 NM_005566 NM_005574 NM_005585 NM_005590 NM_005591 NM_005595 NM_005597 NM_005599 NM_005638 NM_005716 NM_005775 NM_005822 NM_005829 NM_005883 NM_005957 NM_005969 NM_006037 NM_006038 NM_006045 NM_006224 NM_006306 NM_006312 NM_006315 NM_006325 NM_006412 NM_006454 NM_006457 NM_006465 NM_006500 NM_006504 NM_006547 NM_006561 NM_006578 NM_006602 NM_006645 NM_006669 NM_006676 NM_006722 NM_006788 NM_006791 NM_006795 NM_006825 NM_006877 NM_006931 NM_006941 NM_006942 NM_006974 NM_007098 NM_007118 NM_007203 NM_007229 NM_007286 NM_007313 NM_007353 NM_009586 NM_009588 NM_009589 NM_012070 NM_012109 NM_012156 NM_012193 NM_012197 NM_012211 NM_012272 NM_012288 NM_012292 NM_012302 NM_012309 NM_012407 NM_012465 NM_012479 NM_013227 NM_013262 NM_013275 NM_013345 NM_013382 NM_013390 NM_013397 NM_013401 NM_014066 NM_014117 NM_014228 NM_014236 NM_014276 NM_014293 NM_014296 NM_014387 NM_014395 NM_014405 NM_014468 NM_014473 NM_014480 NM_014489 NM_014507 NM_014587 NM_014601 NM_014634 NM_014649 NM_014730 NM_014770 NM_014776 NM_014808 NM_014850 NM_014902 NM_014903 NM_014919 NM_014943 NM_014944 NM_014945 NM_014969 NM_015008 NM_015023 NM_015035 NM_015043 NM_015053 NM_015056 NM_015061 NM_015088 NM_015107 NM_015144 NM_015206 NM_015229 NM_015253 NM_015259 NM_015264 NM_015271 NM_015274 NM_015313 NM_015321 NM_015350 NM_015353 NM_015369 NM_015381 NM_015409 NM_015419 NM_015439 NM_015493 NM_015570 NM_015714 NM_015871 NM_015889 NM_015993 NM_016025 NM_016048 NM_016194 NM_016196 NM_016212 NM_016280 NM_016289 NM_016319 NM_016377 NM_016382 NM_016488 NM_016533 NM_016536 NM_016574 NM_016642 NM_016734 NM_016735 NM_016831 NM_017410 NM_017456 NM_017495 NM_017527 NM_017550 NM_017566 NM_017570 NM_017575 NM_017660 NM_017661 NM_017699 NM_017719 NM_017723 NM_017740 NM_017820 NM_017825 NM_017896 NM_017919 NM_017921 NM_017931 NM_017955 NM_017966 NM_017994 NM_018027 NM_018110 NM_018146 NM_018159 NM_018215 NM_018216 NM_018223 NM_018224 NM_018244 NM_018257 NM_018306 NM_018322 NM_018370 NM_018374 NM_018375 NM_018390 NM_018441 NM_018461 NM_018641 NM_018687 NM_018715 NM_018717 NM_018836 NM_018941 NM_018961 NM_018977 NM_018995 NM_019020 NM_019058 NM_019059 NM_019886 NM_020038 NM_020039 NM_020062 NM_020134 NM_020179 NM_020180 NM_020182 NM_020311 NM_020340 NM_020378 NM_020382 NM_020405 NM_020416 NM_020418 NM_020429 NM_020465 NM_020475 NM_020476 NM_020477 NM_020478 NM_020479 NM_020480 NM_020481 NM_020546 NM_020630 NM_020651 NM_020676 NM_020747 NM_020768 NM_020795 NM_020807 NM_020896 NM_020927 NM_020993 NM_021008 NM_021168 NM_021224 NM_021251 NM_021638 NM_021784 NM_021813 NM_021912 NM_021915 NM_021923 NM_021943 NM_021945 NM_021949 NM_021958 NM_021962 NM_021966 NM_022097 NM_022112 NM_022114 NM_022137 NM_022164 NM_022170 NM_022341 NM_022363 NM_022458 NM_022469 NM_022471 NM_022557 NM_022640 NM_022644 NM_022725 NM_022844 NM_022893 NM_022910 NM_023072 NM_023083 NM_023084 NM_023085 NM_023086 NM_023087 NM_023088 NM_023937 NM_023938 NM_024022 NM_024113 NM_024332 NM_024423 NM_024490 NM_024517 NM_024537 NM_024544 NM_024583 NM_024585 NM_024586 NM_024605 NM_024607 NM_024624 NM_024643 NM_024652 NM_024676 NM_024735 NM_024738 NM_024742 NM_024745 NM_024830 NM_024869 NM_024907 NM_024910 NM_025021 NM_025040 NM_025045 NM_025078 NM_025104 NM_025168 NM_025230 NM_025250 NM_025251 NM_025259 NM_030569 NM_030641 NM_030661 NM_030665 NM_030788 NM_030796 NM_030912 NM_030945 NM_031265 NM_031281 NM_031455 NM_031475 NM_031477 NM_031866 NM_031886 NM_031992 NM_032034 NM_032160 NM_032262 NM_032263 NM_032271 NM_032281 NM_032287 NM_032296 NM_032300 NM_032303 NM_032308 NM_032310 NM_032368 NM_032382 NM_032401 NM_032404 NM_032424 NM_032446 NM_032448 NM_032508 NM_032538 NM_032607 NM_032625 NM_032714 NM_032737 NM_032817 NM_032836 NM_032866 NM_032920 NM_032961 NM_032982 NM_032983 NM_032984 NM_033008 NM_033009 NM_033010 NM_033090 NM_033118 NM_033129 NM_033133 NM_033138 NM_033139 NM_033140 NM_033157 NM_033161 NM_033261 NM_033332 NM_033397 NM_033446 NM_033640 NM_052820 NM_052844 NM_052847 NM_052898 NM_052901 NM_052906 NM_052962 NM_053005 NM_053279 NM_057169 NM_057170 NM_058178 NM_058219 NM_080473 NM_080764 NM_130435 NM_130459 NM_130466 NM_130797 NM_130807 NM_130844 NM_130853 NM_130854 NM_130855 NM_133332 NM_133333 NM_133448 NM_133498 NM_133632 NM_133633 NM_134422 NM_134423 NM_134424 NM_138284 NM_138298 NM_138344 NM_138346 NM_138348 NM_138372 NM_138375 NM_138384 NM_138393 NM_138445 NM_138473 NM_138479 NM_138565 NM_138609 NM_138610 NM_138633 NM_138793 NM_138795 NM_138934 NM_139156 NM_139246 NM_139320 NM_139322 NM_144499 NM_144604 NM_144691 NM_145060 NM_145117 NM_145159 NM_145166 NM_145173 NM_145178 NM_145179 NM_145187 NM_145188 NM_145189 NM_145190 NM_145253 NM_145285 NM_145297 NM_145311 NM_145314 NM_145638 NM_145701 NM_145808 NM_145858 NM_147128 NM_147134 NM_147187 NM_147195 NM_147780 NM_147781 NM_147782 NM_147783 NM_148169 NM_148904 NM_148905 NM_148906 NM_148907 NM_148908 NM_148909 NM_148911 NM_148979 NM_152235 NM_152308 NM_152324 NM_152339 NM_152342 NM_152367 NM_152387 NM_152389 NM_152470 NM_152488 NM_152493 NM_152507 NM_152527 NM_152678 NM_152698 NM_152769 NM_152783 NM_152793 NM_152945 NM_153022 NM_153184 NM_153229 NM_153239 NM_153266 NM_153367 NM_153453 NM_153462 NM_153463 NM_153611 NM_153631 NM_153632 NM_153675 NM_153752 NM_153812 NM_153818 NM_156036 NM_170736 NM_170737 NM_172165 NM_172166 NM_172172 NM_172208 NM_172211 NM_172367 NM_172390 NM_173344 NM_173482 NM_173521 NM_173527 NM_173529 NM_173552 NM_173599 NM_173851 NM_174940 NM_174972 NM_175061 NM_175567 NM_175568 NM_175709 NM_175747 NM_175875 NM_175907 NM_176795 NM_176799 NM_176871 NM_177403 NM_177414 NM_177996 NM_178124 NM_178435 NM_178494 NM_178505 NM_178507 NM_178509 NM_178568 NM_178569 NM_178835 NM_181309 NM_181310 NM_181337 NM_181349 NM_181357 NM_181435 NM_181481 NM_181482 NM_181483 NM_181670 NM_181671 NM_181808 NM_181843 NM_181862 NM_181876 NM_182533 NM_182534 NM_182558 NM_182579 NM_182610 NM_182645 NM_182752 NM_182964 NM_183006 NM_183377 NM_183414 NM_183415 NM_183425 NM_184042 NM_194284 NM_194290 NM_194303 NM_194316 NM_197966 NM_197967 NM_198055 NM_198158 NM_198159 NM_198177 NM_198178 NM_198194 NM_198212 NM_198240 NM_198253 NM_198254 NM_198406 NM_198504 NM_198537 NM_198547 NM_198595 NM_198835 NM_198850 NM_198868 NM_198901 NM_199050 NM_199169 NM_199170 NM_199171 NM_199175 NM_199454 NM_199487 NM_199513 NM_201348 NM_202467 NM_202468 NM_202469 NM_202470 NM_202494 NM_203395 NM_203404 NM_203413 NM_203417 NM_203418 NM_203439 NM_205843 NM_205857 NM_205860 NM_206835 NM_206839 NM_206910 NM_206911 NM_206962 NM_207125 NM_207126 NM_207127 NM_207129 NM_207309 NM_207333 NM_207334 NM_207351 NM_207358 NM_207366 NM_207440 NM_207443 NM_207458 NM_207461 NM_207477 NM_207502 NM_207646 NM_212464 NM_212467 NM_212555 NM_213566 NM_213606 XM_032278 XM_032945 XM_032996 XM_037523 XM_037557 XM_039393 XM_040592 XM_042301 XM_042936 XM_047357 XM_047995 XM_049237 XM_055636 XM_059689 XM_061864 XM_065166 XM_067585 XM_168578 XM_171054 XM_171855 XM_172801 XM_211896 XM_212013 XM_290342 XM_290867 XM_292785 XM_350880 XM_370541 XM_370928 XM_371074 XM_371184 XM_372716 XM_373547 XM_373737 XM_373786 XM_373831 XM_373883 XM_374045 XM_374108 XM_374295 XM_374502 XM_375500 XM_376018 XM_376320 XM_376558 XM_376588 XM_376902 XM_378329 XM_378368 XM_378456 XM_378546 XM_378625 XM_378649 XM_378678 XM_378684 XM_378730 XM_378758 XM_378810 XM_378858 XM_378925 XM_379106 XM_379145 XM_379254 XM_379273 XM_379274 XM_379280 XM_379309 XM_379363 XM_379381 XM_379391 XM_379456 XM_379459 XM_379498 XM_379518 XM_379543 XM_379595 XM_379619 XM_379664 XM_379665 XM_379800 XM_379927 XM_380103 XM_380117 XM_380143 XM_495918 XM_495950 XM_496333 XM_496335 XM_496351 XM_496408 XM_498491 XM_498568 XM_498582 XM_498649 XM_498687 XM_498698 XM_498704 XM_498716 XM_498727 XM_498834 XM_498853 XM_498917 XM_498958 XM_499051 XM_499056 XM_499061 XM_499093 XM_499100 XM_499147 XM_499152 XM_499362 XM_499501 XM_499503 XM_499510 XR_000192 XR_000194 XR_000227	Genes with multiple seed matches: NM_000744 NM_001001188 NM_001001928 NM_001001929 NM_001001930 NM_001012270 NM_001012271 NM_001023565 NM_001024226 NM_001024227 NM_001024228 NM_001024843 NM_001044 NM_001168 NM_001451 NM_001658 NM_002193 NM_002617 NM_003045 NM_003239 NM_004821 NM_005036 NM_005197 NM_005329 NM_005597 NM_007353 NM_014507 NM_014634 NM_015088 NM_018216 NM_018223 NM_022097 NM_022112 NM_023087 NM_023088 NM_023938 NM_024585 NM_024735 NM_025250 NM_032607 NM_053279 NM_133448 NM_138473 NM_153463 NM_153818 NM_182533 NM_194303 NM_205843 NM_206835 XM_032996 XM_037523 XM_039393 XM_373737 XM_373786 XM_376558 XM_376902 XM_378730 XM_378858 XM_379381 XM_379459 XM_379927 XM_498687 XM_499093

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA