VIRsiRNAdb

Predicted off-targets seeds for siRNA "gaacaaacaaacagcgaug" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1275.
Total Genes with multiple seed matches: 111.
Genes with at least one seed match: NM_000029 NM_000109 NM_000114 NM_000148 NM_000151 NM_000164 NM_000176 NM_000195 NM_000215 NM_000232 NM_000243 NM_000246 NM_000283 NM_000325 NM_000332 NM_000353 NM_000362 NM_000373 NM_000386 NM_000451 NM_000545 NM_000555 NM_000578 NM_000587 NM_000618 NM_000633 NM_000664 NM_000692 NM_000732 NM_000748 NM_000761 NM_000774 NM_000791 NM_000812 NM_000843 NM_000902 NM_000944 NM_000947 NM_000991 NM_000997 NM_000998 NM_001001331 NM_001001433 NM_001001434 NM_001001438 NM_001001484 NM_001001665 NM_001001681 NM_001001703 NM_001001928 NM_001001929 NM_001001930 NM_001002762 NM_001002799 NM_001002838 NM_001003688 NM_001003715 NM_001003716 NM_001003828 NM_001004285 NM_001004286 NM_001004313 NM_001004327 NM_001004329 NM_001004335 NM_001004441 NM_001005303 NM_001005353 NM_001005388 NM_001005404 NM_001005920 NM_001006113 NM_001006617 NM_001006619 NM_001006620 NM_001006621 NM_001006638 NM_001006658 NM_001006665 NM_001006932 NM_001007224 NM_001007258 NM_001007262 NM_001007543 NM_001008220 NM_001008493 NM_001008781 NM_001008801 NM_001009566 NM_001009812 NM_001009909 NM_001009956 NM_001009960 NM_001010864 NM_001010874 NM_001010891 NM_001012414 NM_001012418 NM_001013005 NM_001013615 NM_001013633 NM_001013649 NM_001013670 NM_001013677 NM_001013687 NM_001013690 NM_001013695 NM_001013696 NM_001013697 NM_001013704 NM_001013712 NM_001013839 NM_001014765 NM_001015048 NM_001015049 NM_001015881 NM_001017387 NM_001017389 NM_001017390 NM_001017391 NM_001017420 NM_001017440 NM_001017524 NM_001017995 NM_001018000 NM_001018003 NM_001018074 NM_001018075 NM_001018076 NM_001018077 NM_001018089 NM_001018098 NM_001018111 NM_001018115 NM_001020818 NM_001020819 NM_001020820 NM_001020821 NM_001023565 NM_001024094 NM_001024218 NM_001024676 NM_001024680 NM_001024688 NM_001024808 NM_001024844 NM_001024912 NM_001025100 NM_001025108 NM_001025266 NM_001035 NM_001046 NM_001066 NM_001080 NM_001085 NM_001132 NM_001146 NM_001167 NM_001187 NM_001230 NM_001233 NM_001295 NM_001296 NM_001330 NM_001415 NM_001419 NM_001420 NM_001426 NM_001440 NM_001452 NM_001458 NM_001480 NM_001493 NM_001543 NM_001627 NM_001678 NM_001683 NM_001693 NM_001696 NM_001712 NM_001755 NM_001759 NM_001792 NM_001812 NM_001821 NM_001824 NM_001845 NM_001875 NM_001877 NM_001908 NM_001934 NM_001954 NM_002019 NM_002033 NM_002052 NM_002054 NM_002055 NM_002076 NM_002077 NM_002210 NM_002211 NM_002226 NM_002231 NM_002251 NM_002285 NM_002310 NM_002334 NM_002349 NM_002435 NM_002445 NM_002460 NM_002481 NM_002485 NM_002505 NM_002509 NM_002577 NM_002594 NM_002610 NM_002646 NM_002709 NM_002719 NM_002737 NM_002760 NM_002926 NM_002953 NM_002968 NM_002990 NM_003012 NM_003023 NM_003035 NM_003112 NM_003166 NM_003178 NM_003243 NM_003247 NM_003274 NM_003281 NM_003309 NM_003337 NM_003387 NM_003388 NM_003408 NM_003417 NM_003466 NM_003481 NM_003490 NM_003505 NM_003506 NM_003507 NM_003565 NM_003576 NM_003590 NM_003605 NM_003612 NM_003631 NM_003640 NM_003661 NM_003685 NM_003687 NM_003724 NM_003763 NM_003782 NM_003806 NM_003842 NM_003899 NM_003901 NM_003955 NM_003969 NM_004006 NM_004007 NM_004009 NM_004010 NM_004011 NM_004012 NM_004013 NM_004014 NM_004015 NM_004017 NM_004020 NM_004079 NM_004089 NM_004091 NM_004092 NM_004093 NM_004098 NM_004128 NM_004142 NM_004171 NM_004233 NM_004254 NM_004273 NM_004285 NM_004297 NM_004311 NM_004315 NM_004368 NM_004370 NM_004398 NM_004402 NM_004412 NM_004416 NM_004485 NM_004505 NM_004518 NM_004523 NM_004603 NM_004621 NM_004701 NM_004711 NM_004712 NM_004730 NM_004737 NM_004767 NM_004796 NM_004797 NM_004805 NM_004854 NM_004862 NM_004863 NM_004866 NM_004869 NM_004873 NM_004878 NM_004913 NM_004914 NM_004915 NM_004948 NM_004954 NM_004956 NM_004985 NM_005016 NM_005031 NM_005036 NM_005044 NM_005056 NM_005096 NM_005119 NM_005139 NM_005149 NM_005187 NM_005197 NM_005207 NM_005238 NM_005259 NM_005276 NM_005282 NM_005333 NM_005338 NM_005368 NM_005370 NM_005373 NM_005397 NM_005417 NM_005426 NM_005434 NM_005443 NM_005452 NM_005475 NM_005502 NM_005503 NM_005513 NM_005540 NM_005552 NM_005578 NM_005665 NM_005683 NM_005707 NM_005737 NM_005775 NM_005792 NM_005831 NM_005883 NM_005895 NM_005900 NM_005906 NM_005907 NM_005908 NM_005935 NM_005981 NM_005982 NM_006022 NM_006043 NM_006052 NM_006055 NM_006056 NM_006089 NM_006094 NM_006125 NM_006162 NM_006276 NM_006278 NM_006282 NM_006300 NM_006306 NM_006315 NM_006371 NM_006380 NM_006393 NM_006464 NM_006481 NM_006527 NM_006538 NM_006541 NM_006593 NM_006599 NM_006618 NM_006650 NM_006669 NM_006675 NM_006707 NM_006861 NM_006883 NM_006915 NM_006925 NM_006931 NM_006943 NM_006969 NM_006987 NM_006990 NM_007011 NM_007069 NM_007071 NM_007078 NM_007126 NM_007137 NM_007203 NM_007217 NM_007245 NM_007257 NM_007264 NM_007270 NM_007287 NM_007288 NM_007289 NM_007306 NM_007350 NM_012076 NM_012137 NM_012145 NM_012154 NM_012184 NM_012231 NM_012239 NM_012338 NM_012388 NM_012395 NM_012409 NM_012434 NM_012466 NM_013230 NM_013261 NM_013281 NM_013322 NM_013327 NM_013345 NM_013410 NM_013422 NM_013436 NM_013951 NM_013952 NM_013953 NM_013992 NM_013993 NM_013994 NM_014012 NM_014066 NM_014106 NM_014157 NM_014162 NM_014190 NM_014279 NM_014319 NM_014325 NM_014351 NM_014352 NM_014356 NM_014360 NM_014368 NM_014388 NM_014413 NM_014423 NM_014448 NM_014468 NM_014484 NM_014553 NM_014556 NM_014613 NM_014615 NM_014633 NM_014721 NM_014730 NM_014732 NM_014737 NM_014742 NM_014746 NM_014828 NM_014835 NM_014860 NM_014864 NM_014867 NM_014869 NM_014873 NM_014876 NM_014904 NM_014934 NM_014944 NM_014948 NM_014959 NM_014988 NM_014994 NM_015017 NM_015023 NM_015033 NM_015035 NM_015056 NM_015090 NM_015094 NM_015100 NM_015111 NM_015155 NM_015157 NM_015198 NM_015213 NM_015219 NM_015265 NM_015339 NM_015352 NM_015380 NM_015394 NM_015409 NM_015411 NM_015438 NM_015557 NM_015610 NM_015980 NM_015986 NM_016003 NM_016057 NM_016065 NM_016217 NM_016282 NM_016304 NM_016306 NM_016412 NM_016484 NM_016575 NM_016581 NM_016592 NM_016611 NM_016643 NM_016818 NM_017437 NM_017438 NM_017490 NM_017515 NM_017542 NM_017575 NM_017647 NM_017654 NM_017662 NM_017694 NM_017699 NM_017700 NM_017723 NM_017787 NM_017789 NM_017791 NM_017828 NM_017849 NM_017877 NM_017924 NM_017928 NM_017933 NM_017939 NM_017990 NM_018017 NM_018038 NM_018050 NM_018069 NM_018091 NM_018197 NM_018212 NM_018245 NM_018273 NM_018295 NM_018385 NM_018440 NM_018658 NM_018660 NM_018704 NM_018727 NM_018945 NM_018947 NM_018999 NM_019034 NM_019086 NM_019094 NM_019105 NM_019119 NM_019594 NM_019895 NM_020062 NM_020127 NM_020180 NM_020310 NM_020379 NM_020452 NM_020456 NM_020525 NM_020552 NM_020553 NM_020652 NM_020702 NM_020704 NM_020710 NM_020728 NM_020764 NM_020769 NM_020800 NM_020806 NM_020826 NM_020839 NM_020851 NM_020853 NM_020894 NM_020922 NM_020951 NM_020957 NM_020993 NM_021135 NM_021155 NM_021205 NM_021215 NM_021242 NM_021249 NM_021615 NM_021624 NM_021642 NM_021705 NM_021798 NM_021809 NM_021902 NM_021916 NM_021967 NM_021977 NM_022049 NM_022059 NM_022074 NM_022088 NM_022140 NM_022356 NM_022449 NM_022477 NM_022490 NM_022491 NM_022739 NM_022817 NM_022828 NM_022832 NM_022836 NM_022845 NM_022898 NM_022915 NM_022978 NM_023931 NM_024022 NM_024037 NM_024040 NM_024055 NM_024072 NM_024080 NM_024117 NM_024345 NM_024411 NM_024419 NM_024541 NM_024611 NM_024614 NM_024637 NM_024656 NM_024677 NM_024708 NM_024711 NM_024730 NM_024745 NM_024784 NM_024809 NM_024881 NM_024889 NM_024908 NM_024940 NM_024945 NM_024955 NM_024974 NM_024989 NM_025079 NM_025080 NM_025083 NM_025160 NM_025169 NM_025265 NM_030633 NM_030655 NM_030661 NM_030664 NM_030760 NM_030777 NM_030783 NM_030786 NM_030801 NM_030806 NM_030918 NM_030952 NM_030965 NM_030968 NM_031227 NM_031228 NM_031271 NM_031307 NM_031310 NM_031421 NM_031442 NM_031444 NM_031445 NM_031453 NM_031465 NM_031468 NM_031904 NM_031910 NM_031912 NM_031954 NM_031989 NM_032012 NM_032013 NM_032023 NM_032046 NM_032105 NM_032120 NM_032121 NM_032144 NM_032153 NM_032239 NM_032242 NM_032276 NM_032281 NM_032287 NM_032294 NM_032310 NM_032317 NM_032351 NM_032373 NM_032374 NM_032401 NM_032404 NM_032411 NM_032421 NM_032432 NM_032447 NM_032449 NM_032470 NM_032563 NM_032632 NM_032682 NM_032689 NM_032735 NM_032782 NM_032785 NM_032864 NM_032873 NM_032882 NM_032932 NM_032933 NM_032958 NM_032959 NM_032976 NM_032977 NM_033066 NM_033103 NM_033122 NM_033182 NM_033224 NM_033225 NM_033332 NM_033357 NM_033360 NM_033411 NM_033426 NM_033429 NM_033671 NM_052816 NM_052822 NM_052847 NM_052851 NM_052879 NM_053053 NM_053279 NM_058172 NM_078470 NM_078483 NM_080542 NM_080543 NM_080625 NM_080645 NM_080650 NM_080660 NM_080664 NM_080677 NM_080678 NM_080704 NM_080705 NM_080706 NM_080723 NM_080730 NM_080731 NM_080764 NM_080863 NM_080867 NM_080876 NM_130782 NM_130786 NM_133329 NM_133371 NM_133373 NM_133460 NM_133510 NM_133632 NM_133633 NM_133642 NM_138279 NM_138281 NM_138287 NM_138295 NM_138373 NM_138390 NM_138400 NM_138413 NM_138428 NM_138436 NM_138494 NM_138572 NM_138576 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138713 NM_138714 NM_138731 NM_138797 NM_138970 NM_139024 NM_139246 NM_139279 NM_139321 NM_144498 NM_144567 NM_144584 NM_144622 NM_144667 NM_144682 NM_144684 NM_144692 NM_144707 NM_144724 NM_144778 NM_144991 NM_145008 NM_145035 NM_145041 NM_145159 NM_145206 NM_145256 NM_145284 NM_145298 NM_145306 NM_145309 NM_145326 NM_145343 NM_145735 NM_145753 NM_145808 NM_145859 NM_145860 NM_147131 NM_147187 NM_147780 NM_147781 NM_147782 NM_147783 NM_148170 NM_148960 NM_152233 NM_152235 NM_152271 NM_152272 NM_152361 NM_152420 NM_152442 NM_152470 NM_152472 NM_152482 NM_152522 NM_152553 NM_152608 NM_152636 NM_152686 NM_152704 NM_152751 NM_152793 NM_152796 NM_152924 NM_152939 NM_153220 NM_153259 NM_153261 NM_153344 NM_153367 NM_153426 NM_153427 NM_153607 NM_153610 NM_153611 NM_153631 NM_153632 NM_153717 NM_170740 NM_170741 NM_170742 NM_170746 NM_170773 NM_170774 NM_172000 NM_172206 NM_172344 NM_172387 NM_172388 NM_172389 NM_173065 NM_173158 NM_173214 NM_173462 NM_173558 NM_173576 NM_173580 NM_173583 NM_173621 NM_173627 NM_173654 NM_173657 NM_173687 NM_173795 NM_173802 NM_173827 NM_173833 NM_173851 NM_175873 NM_175883 NM_175892 NM_175898 NM_175900 NM_175901 NM_175931 NM_176081 NM_176083 NM_176084 NM_176085 NM_176086 NM_176792 NM_176801 NM_176874 NM_177535 NM_177537 NM_177552 NM_177924 NM_177966 NM_178006 NM_178007 NM_178126 NM_178145 NM_178151 NM_178152 NM_178153 NM_178422 NM_178435 NM_178520 NM_178539 NM_178586 NM_178858 NM_178864 NM_180989 NM_181078 NM_181079 NM_181442 NM_181552 NM_181644 NM_181670 NM_181724 NM_181776 NM_181826 NM_181827 NM_181875 NM_182487 NM_182501 NM_182506 NM_182510 NM_182513 NM_182517 NM_182518 NM_182526 NM_182534 NM_182578 NM_182584 NM_182607 NM_182616 NM_182621 NM_182633 NM_182637 NM_182638 NM_182643 NM_182644 NM_182686 NM_182757 NM_182827 NM_183050 NM_183412 NM_183413 NM_183422 NM_194282 NM_194290 NM_194317 NM_197975 NM_198057 NM_198138 NM_198212 NM_198275 NM_198291 NM_198391 NM_198484 NM_198488 NM_198506 NM_198537 NM_198593 NM_198594 NM_198797 NM_198835 NM_198847 NM_198850 NM_198946 NM_198968 NM_199003 NM_199040 NM_199050 NM_199132 NM_199138 NM_199160 NM_199175 NM_199188 NM_199190 NM_199355 NM_199358 NM_199415 NM_199421 NM_199426 NM_199513 NM_201253 NM_201277 NM_201520 NM_201550 NM_201599 NM_201624 NM_201651 NM_203307 NM_203377 NM_203378 NM_203395 NM_203422 NM_203464 NM_205842 NM_206876 NM_206877 NM_206893 NM_207003 NM_207006 NM_207032 NM_207033 NM_207034 NM_207171 NM_207174 NM_207303 NM_207304 NM_207306 NM_207333 NM_207372 NM_207380 NM_207394 NM_207400 NM_207401 NM_207411 NM_207418 NM_207437 NM_207438 NM_207462 NM_207504 NM_207627 NM_207628 NM_207629 NM_207630 NM_212554 NM_213600 NM_213604 XM_027307 XM_032945 XM_038150 XM_042936 XM_048592 XM_049078 XM_056455 XM_059037 XM_113743 XM_166320 XM_208097 XM_208990 XM_209700 XM_209920 XM_211287 XM_211305 XM_290502 XM_291344 XM_295270 XM_370639 XM_370928 XM_371151 XM_371184 XM_371204 XM_371405 XM_371486 XM_371591 XM_371664 XM_371891 XM_372019 XM_372028 XM_372030 XM_372035 XM_372108 XM_372723 XM_373538 XM_373704 XM_373742 XM_373750 XM_373765 XM_373779 XM_373814 XM_373950 XM_374012 XM_374078 XM_374132 XM_374145 XM_374422 XM_374803 XM_374842 XM_374983 XM_375174 XM_375183 XM_375292 XM_375359 XM_375373 XM_375589 XM_375606 XM_375667 XM_375697 XM_375853 XM_375928 XM_376189 XM_376212 XM_376386 XM_376558 XM_376586 XM_376658 XM_376905 XM_377002 XM_377041 XM_378178 XM_378273 XM_378331 XM_378399 XM_378456 XM_378511 XM_378516 XM_378550 XM_378620 XM_378678 XM_378698 XM_378747 XM_378860 XM_378914 XM_378970 XM_379086 XM_379108 XM_379118 XM_379145 XM_379154 XM_379267 XM_379309 XM_379395 XM_379406 XM_379501 XM_379535 XM_379584 XM_379595 XM_379636 XM_379780 XM_379798 XM_379897 XM_380120 XM_380160 XM_495807 XM_495902 XM_495937 XM_496134 XM_496156 XM_496191 XM_496280 XM_496330 XM_496351 XM_496481 XM_496539 XM_496701 XM_496780 XM_496942 XM_496966 XM_497002 XM_497012 XM_497080 XM_498440 XM_498456 XM_498457 XM_498499 XM_498506 XM_498553 XM_498614 XM_498649 XM_498824 XM_498877 XM_498917 XM_498954 XM_498957 XM_498960 XM_498972 XM_499047 XM_499048 XM_499056 XM_499057 XM_499084 XM_499093 XM_499130 XM_499170 XM_499182 XM_499246 XM_499309 XM_499503 XM_499505 XM_499539 XM_499570 XM_499586 XR_000184 XR_000190 XR_000217 XR_000261 XR_000265 XR_000266 XR_000292 XR_000294	Genes with multiple seed matches: NM_000451 NM_000664 NM_000791 NM_000998 NM_001001484 NM_001001928 NM_001001929 NM_001001930 NM_001009812 NM_001013696 NM_001020818 NM_001020819 NM_001020820 NM_001020821 NM_002076 NM_002310 NM_002990 NM_003281 NM_003481 NM_003605 NM_003842 NM_004142 NM_004273 NM_004311 NM_004711 NM_004914 NM_005036 NM_005044 NM_005149 NM_005282 NM_005737 NM_006393 NM_006538 NM_007126 NM_007306 NM_014553 NM_014556 NM_014737 NM_014835 NM_014867 NM_014948 NM_014959 NM_016592 NM_017437 NM_018440 NM_018658 NM_018947 NM_019094 NM_020894 NM_021215 NM_021642 NM_022817 NM_024784 NM_030655 NM_030661 NM_030664 NM_030806 NM_031954 NM_032873 NM_052847 NM_080764 NM_080876 NM_138373 NM_138428 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_144498 NM_147187 NM_152272 NM_152793 NM_153344 NM_153631 NM_153632 NM_170741 NM_170742 NM_170773 NM_170774 NM_173795 NM_177966 NM_181776 NM_182526 NM_182607 NM_194290 NM_198835 NM_198850 NM_199040 NM_199415 NM_207003 XM_038150 XM_208990 XM_371891 XM_372723 XM_374422 XM_374803 XM_375292 XM_375373 XM_376586 XM_378550 XM_378747 XM_379595 XM_379798 XM_496351 XM_497002 XM_498917 XM_499093 XM_499182

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA