VIRsiRNAdb

Predicted off-targets seeds for siRNA "aaaaacagcauauugacgcug" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1199.
Total Genes with multiple seed matches: 89.
Genes with at least one seed match: NM_000037 NM_000052 NM_000059 NM_000074 NM_000092 NM_000109 NM_000164 NM_000188 NM_000192 NM_000231 NM_000253 NM_000268 NM_000278 NM_000299 NM_000356 NM_000382 NM_000398 NM_000435 NM_000444 NM_000476 NM_000486 NM_000512 NM_000566 NM_000633 NM_000634 NM_000663 NM_000695 NM_000721 NM_000723 NM_000757 NM_000788 NM_000813 NM_000832 NM_000861 NM_000870 NM_000896 NM_000897 NM_000918 NM_000961 NM_000995 NM_001001188 NM_001001396 NM_001001690 NM_001001698 NM_001001707 NM_001001791 NM_001001852 NM_001001873 NM_001002034 NM_001002231 NM_001002232 NM_001002251 NM_001002252 NM_001002860 NM_001002861 NM_001002912 NM_001002916 NM_001003399 NM_001003656 NM_001003674 NM_001003675 NM_001003715 NM_001003716 NM_001003786 NM_001003787 NM_001003788 NM_001003800 NM_001003940 NM_001003942 NM_001003943 NM_001004302 NM_001004354 NM_001004355 NM_001004430 NM_001004439 NM_001005209 NM_001005303 NM_001005337 NM_001005360 NM_001005361 NM_001005362 NM_001005611 NM_001006113 NM_001006604 NM_001006932 NM_001007026 NM_001007225 NM_001007257 NM_001007271 NM_001007274 NM_001007275 NM_001008220 NM_001008408 NM_001008493 NM_001008494 NM_001008656 NM_001008658 NM_001008742 NM_001008745 NM_001009553 NM_001009566 NM_001009812 NM_001009820 NM_001009932 NM_001009933 NM_001009934 NM_001009939 NM_001009955 NM_001010882 NM_001010982 NM_001011541 NM_001011658 NM_001011713 NM_001011724 NM_001011725 NM_001012426 NM_001012427 NM_001012502 NM_001012508 NM_001012711 NM_001012729 NM_001012733 NM_001012734 NM_001012755 NM_001012982 NM_001013672 NM_001013673 NM_001013675 NM_001013678 NM_001013687 NM_001013693 NM_001013701 NM_001013710 NM_001013721 NM_001013724 NM_001013727 NM_001014431 NM_001014432 NM_001014797 NM_001015048 NM_001015049 NM_001017424 NM_001017425 NM_001017929 NM_001017965 NM_001017989 NM_001017995 NM_001018071 NM_001024074 NM_001024460 NM_001024646 NM_001024657 NM_001025094 NM_001025098 NM_001065 NM_001082 NM_001116 NM_001135 NM_001147 NM_001174 NM_001275 NM_001282 NM_001346 NM_001348 NM_001387 NM_001420 NM_001490 NM_001505 NM_001674 NM_001684 NM_001728 NM_001830 NM_001893 NM_001913 NM_001922 NM_001932 NM_001940 NM_001961 NM_001965 NM_001980 NM_002055 NM_002062 NM_002136 NM_002250 NM_002265 NM_002304 NM_002319 NM_002342 NM_002359 NM_002375 NM_002442 NM_002474 NM_002477 NM_002501 NM_002505 NM_002561 NM_002582 NM_002599 NM_002604 NM_002613 NM_002636 NM_002648 NM_002661 NM_002705 NM_002744 NM_002751 NM_002813 NM_002819 NM_002848 NM_002883 NM_002911 NM_002996 NM_003004 NM_003009 NM_003033 NM_003099 NM_003108 NM_003119 NM_003120 NM_003123 NM_003258 NM_003277 NM_003327 NM_003348 NM_003372 NM_003382 NM_003388 NM_003392 NM_003438 NM_003528 NM_003578 NM_003648 NM_003674 NM_003749 NM_003791 NM_003842 NM_003872 NM_003876 NM_003908 NM_003926 NM_003938 NM_003963 NM_003987 NM_003988 NM_003989 NM_003990 NM_004006 NM_004007 NM_004009 NM_004010 NM_004011 NM_004012 NM_004013 NM_004014 NM_004015 NM_004016 NM_004017 NM_004018 NM_004020 NM_004021 NM_004022 NM_004023 NM_004024 NM_004059 NM_004129 NM_004170 NM_004172 NM_004204 NM_004227 NM_004302 NM_004338 NM_004339 NM_004350 NM_004395 NM_004405 NM_004418 NM_004436 NM_004459 NM_004482 NM_004500 NM_004514 NM_004519 NM_004553 NM_004561 NM_004573 NM_004584 NM_004588 NM_004667 NM_004711 NM_004745 NM_004762 NM_004778 NM_004782 NM_004818 NM_004873 NM_004878 NM_004923 NM_004936 NM_004945 NM_004992 NM_005076 NM_005095 NM_005114 NM_005137 NM_005157 NM_005163 NM_005197 NM_005207 NM_005219 NM_005268 NM_005277 NM_005314 NM_005336 NM_005370 NM_005378 NM_005411 NM_005461 NM_005465 NM_005503 NM_005504 NM_005543 NM_005551 NM_005574 NM_005627 NM_005632 NM_005730 NM_005738 NM_005795 NM_005895 NM_005902 NM_005975 NM_006011 NM_006016 NM_006018 NM_006072 NM_006094 NM_006161 NM_006187 NM_006224 NM_006257 NM_006277 NM_006291 NM_006319 NM_006329 NM_006336 NM_006374 NM_006404 NM_006421 NM_006546 NM_006548 NM_006559 NM_006570 NM_006598 NM_006602 NM_006612 NM_006627 NM_006635 NM_006646 NM_006650 NM_006651 NM_006657 NM_006673 NM_006697 NM_006730 NM_006736 NM_006753 NM_006779 NM_006813 NM_006844 NM_006861 NM_006864 NM_006865 NM_006931 NM_006989 NM_006990 NM_006998 NM_007007 NM_007030 NM_007050 NM_007067 NM_007073 NM_007146 NM_007174 NM_007185 NM_007255 NM_007313 NM_007326 NM_007327 NM_007345 NM_007353 NM_007354 NM_007368 NM_007374 NM_012073 NM_012091 NM_012104 NM_012189 NM_012197 NM_012211 NM_012232 NM_012249 NM_012268 NM_012285 NM_012300 NM_012324 NM_012334 NM_012384 NM_012405 NM_013227 NM_013260 NM_013282 NM_013286 NM_013292 NM_013301 NM_013316 NM_013343 NM_013364 NM_013416 NM_014001 NM_014047 NM_014077 NM_014203 NM_014216 NM_014217 NM_014226 NM_014278 NM_014309 NM_014347 NM_014365 NM_014370 NM_014395 NM_014411 NM_014424 NM_014444 NM_014470 NM_014556 NM_014563 NM_014579 NM_014601 NM_014665 NM_014667 NM_014679 NM_014698 NM_014706 NM_014720 NM_014723 NM_014772 NM_014795 NM_014839 NM_014844 NM_014854 NM_014859 NM_014867 NM_014869 NM_014873 NM_014876 NM_014890 NM_014901 NM_014919 NM_014943 NM_014944 NM_014953 NM_014954 NM_015002 NM_015033 NM_015085 NM_015094 NM_015141 NM_015173 NM_015192 NM_015205 NM_015206 NM_015226 NM_015250 NM_015254 NM_015289 NM_015315 NM_015316 NM_015318 NM_015329 NM_015332 NM_015352 NM_015353 NM_015359 NM_015542 NM_015558 NM_015568 NM_015833 NM_015834 NM_015866 NM_015898 NM_015949 NM_016101 NM_016114 NM_016224 NM_016263 NM_016269 NM_016275 NM_016337 NM_016376 NM_016418 NM_016431 NM_016484 NM_016598 NM_016611 NM_016638 NM_017410 NM_017433 NM_017450 NM_017456 NM_017555 NM_017588 NM_017590 NM_017617 NM_017664 NM_017668 NM_017675 NM_017709 NM_017712 NM_017725 NM_017763 NM_017798 NM_017810 NM_017811 NM_017893 NM_017920 NM_017933 NM_017957 NM_017966 NM_017967 NM_017974 NM_017980 NM_018057 NM_018070 NM_018079 NM_018088 NM_018089 NM_018092 NM_018184 NM_018210 NM_018212 NM_018280 NM_018316 NM_018399 NM_018433 NM_018461 NM_018556 NM_018566 NM_018694 NM_018702 NM_018717 NM_018836 NM_018980 NM_019041 NM_019094 NM_019100 NM_019595 NM_020126 NM_020134 NM_020180 NM_020210 NM_020310 NM_020335 NM_020357 NM_020377 NM_020382 NM_020405 NM_020406 NM_020458 NM_020475 NM_020476 NM_020477 NM_020686 NM_020708 NM_020713 NM_020738 NM_020761 NM_020764 NM_020773 NM_020774 NM_020786 NM_020796 NM_020804 NM_020896 NM_020947 NM_021101 NM_021104 NM_021130 NM_021135 NM_021149 NM_021165 NM_021215 NM_021248 NM_021269 NM_021569 NM_021705 NM_021911 NM_021940 NM_021943 NM_022042 NM_022050 NM_022114 NM_022116 NM_022124 NM_022129 NM_022152 NM_022482 NM_022491 NM_022719 NM_022819 NM_022834 NM_022842 NM_022844 NM_022976 NM_023018 NM_023112 NM_023934 NM_023939 NM_023946 NM_024019 NM_024026 NM_024110 NM_024298 NM_024510 NM_024511 NM_024522 NM_024536 NM_024554 NM_024591 NM_024596 NM_024630 NM_024633 NM_024646 NM_024647 NM_024719 NM_024722 NM_024757 NM_024758 NM_024781 NM_024811 NM_024816 NM_024830 NM_024832 NM_024877 NM_024922 NM_024923 NM_025058 NM_025078 NM_025079 NM_025140 NM_025154 NM_025163 NM_025191 NM_025219 NM_025251 NM_030636 NM_030662 NM_030667 NM_030668 NM_030669 NM_030670 NM_030671 NM_030759 NM_030775 NM_030781 NM_030793 NM_030798 NM_030803 NM_030884 NM_030913 NM_030919 NM_030964 NM_030980 NM_031157 NM_031268 NM_031314 NM_031436 NM_031455 NM_031471 NM_031484 NM_031491 NM_031904 NM_031990 NM_031991 NM_032108 NM_032109 NM_032115 NM_032179 NM_032189 NM_032227 NM_032262 NM_032271 NM_032281 NM_032289 NM_032294 NM_032323 NM_032325 NM_032329 NM_032354 NM_032374 NM_032391 NM_032415 NM_032421 NM_032446 NM_032451 NM_032512 NM_032529 NM_032536 NM_032558 NM_032642 NM_032656 NM_032711 NM_032732 NM_032737 NM_032826 NM_032855 NM_032866 NM_032883 NM_032924 NM_032932 NM_033017 NM_033091 NM_033199 NM_033212 NM_033229 NM_033342 NM_033387 NM_033393 NM_033446 NM_033496 NM_033497 NM_033498 NM_033500 NM_033503 NM_033513 NM_033551 NM_033624 NM_033625 NM_033626 NM_033644 NM_033645 NM_052821 NM_052843 NM_052863 NM_052889 NM_052898 NM_052926 NM_052928 NM_052987 NM_052988 NM_053056 NM_058175 NM_058182 NM_058197 NM_058246 NM_078469 NM_078471 NM_078487 NM_078625 NM_080473 NM_080599 NM_080668 NM_080717 NM_080792 NM_080816 NM_080881 NM_130466 NM_130786 NM_130787 NM_130807 NM_133170 NM_133332 NM_133333 NM_133445 NM_133466 NM_133627 NM_133628 NM_133630 NM_134268 NM_138350 NM_138384 NM_138402 NM_138415 NM_138435 NM_138441 NM_138444 NM_138445 NM_138450 NM_138457 NM_138619 NM_138643 NM_138644 NM_138774 NM_138958 NM_138971 NM_138972 NM_138973 NM_139016 NM_139021 NM_139062 NM_139068 NM_139069 NM_139124 NM_139176 NM_139177 NM_144578 NM_144599 NM_144604 NM_144669 NM_144677 NM_144682 NM_144994 NM_145115 NM_145185 NM_145187 NM_145188 NM_145189 NM_145190 NM_145252 NM_145275 NM_145296 NM_145316 NM_145347 NM_145348 NM_145638 NM_145693 NM_145716 NM_145752 NM_145763 NM_145798 NM_146388 NM_147147 NM_147187 NM_148170 NM_148955 NM_152235 NM_152253 NM_152483 NM_152489 NM_152515 NM_152568 NM_152571 NM_152622 NM_152826 NM_152840 NM_152879 NM_152888 NM_152889 NM_152939 NM_152988 NM_153035 NM_153239 NM_153335 NM_153355 NM_153367 NM_153442 NM_153460 NM_153461 NM_153462 NM_153463 NM_153613 NM_153646 NM_153647 NM_153648 NM_153746 NM_153768 NM_153769 NM_153770 NM_156036 NM_170705 NM_170711 NM_172000 NM_172020 NM_172206 NM_172211 NM_173344 NM_173476 NM_173548 NM_173624 NM_173627 NM_173680 NM_173681 NM_173689 NM_174902 NM_175080 NM_175847 NM_175857 NM_175884 NM_175898 NM_175907 NM_176786 NM_176799 NM_177458 NM_177551 NM_178034 NM_178122 NM_178125 NM_178129 NM_178443 NM_178448 NM_178518 NM_178526 NM_178557 NM_178841 NM_178842 NM_178864 NM_180981 NM_181291 NM_181337 NM_181430 NM_181431 NM_181481 NM_181482 NM_181483 NM_181486 NM_181489 NM_181500 NM_181504 NM_181523 NM_181524 NM_181784 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181833 NM_181834 NM_181835 NM_181846 NM_182510 NM_182533 NM_182560 NM_182580 NM_182639 NM_182641 NM_182643 NM_182734 NM_182740 NM_182758 NM_182760 NM_182832 NM_182854 NM_182909 NM_183059 NM_183065 NM_183414 NM_183415 NM_194290 NM_194295 NM_194303 NM_194352 NM_194356 NM_197956 NM_198074 NM_198154 NM_198253 NM_198254 NM_198279 NM_198461 NM_198465 NM_198485 NM_198490 NM_198571 NM_198582 NM_198589 NM_198590 NM_198591 NM_198797 NM_198887 NM_198890 NM_198925 NM_198935 NM_198955 NM_198999 NM_199040 NM_199050 NM_199121 NM_199141 NM_199175 NM_199176 NM_199282 NM_199367 NM_199454 NM_199461 NM_201266 NM_201279 NM_201565 NM_201591 NM_201592 NM_201613 NM_201650 NM_203318 NM_203346 NM_203353 NM_203430 NM_203431 NM_205836 NM_206828 NM_206833 NM_206835 NM_206887 NM_207042 NM_207045 NM_207046 NM_207117 NM_207285 NM_207349 NM_207378 NM_207379 NM_207391 NM_207395 NM_207419 NM_207434 NM_207454 NM_207473 NM_207483 NM_207644 NM_212460 NM_213589 NM_213613 XM_032278 XM_032945 XM_032996 XM_035601 XM_051017 XM_059318 XM_059482 XM_059689 XM_066058 XM_088459 XM_116980 XM_170659 XM_208320 XM_209429 XM_209559 XM_209700 XM_211367 XM_211805 XM_290401 XM_290842 XM_291019 XM_291105 XM_291729 XM_292717 XM_293380 XM_294688 XM_294993 XM_297816 XM_350880 XM_370932 XM_370982 XM_371015 XM_371074 XM_371196 XM_371755 XM_371797 XM_372013 XM_372019 XM_372028 XM_372030 XM_372193 XM_372273 XM_372556 XM_373433 XM_373687 XM_373775 XM_374001 XM_374004 XM_374053 XM_374343 XM_375042 XM_375065 XM_375081 XM_375292 XM_375359 XM_375378 XM_376049 XM_376241 XM_376350 XM_376567 XM_376902 XM_377002 XM_377076 XM_377476 XM_377742 XM_378224 XM_378239 XM_378247 XM_378259 XM_378279 XM_378299 XM_378309 XM_378360 XM_378362 XM_378379 XM_378434 XM_378494 XM_378507 XM_378558 XM_378567 XM_378617 XM_378623 XM_378667 XM_378786 XM_378823 XM_378842 XM_378843 XM_378861 XM_378949 XM_378993 XM_379029 XM_379030 XM_379065 XM_379074 XM_379096 XM_379118 XM_379164 XM_379171 XM_379189 XM_379215 XM_379458 XM_379482 XM_379483 XM_379501 XM_379535 XM_379584 XM_379664 XM_379665 XM_379774 XM_379877 XM_380098 XM_380099 XM_380120 XM_380160 XM_495860 XM_495926 XM_496036 XM_496054 XM_496335 XM_496351 XM_496749 XM_496836 XM_496895 XM_496943 XM_496945 XM_496946 XM_496947 XM_496948 XM_496949 XM_496951 XM_496952 XM_496953 XM_496954 XM_496955 XM_496956 XM_496957 XM_496960 XM_496961 XM_497019 XM_497080 XM_497134 XM_498473 XM_498491 XM_498511 XM_498553 XM_498572 XM_498693 XM_498736 XM_498737 XM_498758 XM_498857 XM_498886 XM_498902 XM_498933 XM_498955 XM_498972 XM_499035 XM_499046 XM_499047 XM_499048 XM_499056 XM_499093 XM_499136 XM_499137 XM_499170 XM_499323 XM_499503 XM_499541 XR_000184 XR_000190 XR_000194 XR_000227 XR_000261 XR_000265 XR_000269 XR_000292 XR_000294	Genes with multiple seed matches: NM_000037 NM_000278 NM_001001188 NM_001002231 NM_001002232 NM_001003940 NM_001003942 NM_001003943 NM_001004430 NM_001008493 NM_001008494 NM_001013701 NM_001014431 NM_001014432 NM_001017995 NM_001174 NM_002501 NM_002613 NM_002996 NM_003382 NM_003926 NM_003987 NM_003988 NM_003989 NM_003990 NM_004339 NM_004711 NM_004745 NM_004992 NM_005163 NM_005551 NM_007345 NM_014698 NM_014772 NM_014844 NM_015316 NM_015318 NM_017798 NM_017933 NM_018212 NM_020475 NM_020476 NM_020477 NM_023939 NM_024757 NM_024830 NM_025251 NM_030775 NM_030781 NM_031268 NM_031455 NM_032108 NM_032262 NM_032329 NM_032529 NM_032642 NM_033503 NM_033513 NM_138350 NM_138384 NM_138450 NM_146388 NM_152515 NM_152988 NM_156036 NM_174902 NM_178557 NM_182533 NM_182832 NM_183414 NM_198074 NM_198571 NM_199050 NM_201565 NM_201613 NM_207379 NM_207483 XM_066058 XM_088459 XM_372019 XM_372028 XM_372030 XM_378993 XM_379029 XM_379458 XM_379584 XM_497080 XM_498972 XR_000265

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA