VIRsiRNAdb

Predicted off-targets seeds for siRNA "ugauaacacaguucgaguc" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :932.
Total Genes with multiple seed matches: 56.
Genes with at least one seed match: NM_000033 NM_000112 NM_000210 NM_000214 NM_000246 NM_000252 NM_000317 NM_000332 NM_000337 NM_000399 NM_000430 NM_000451 NM_000492 NM_000529 NM_000555 NM_000588 NM_000611 NM_000628 NM_000636 NM_000647 NM_000664 NM_000690 NM_000767 NM_000780 NM_000826 NM_000841 NM_000843 NM_000890 NM_000902 NM_000958 NM_000962 NM_000983 NM_001001342 NM_001001557 NM_001001686 NM_001001687 NM_001001707 NM_001001723 NM_001001732 NM_001002836 NM_001002840 NM_001002861 NM_001002920 NM_001003652 NM_001003674 NM_001003675 NM_001003789 NM_001003800 NM_001004125 NM_001004321 NM_001004328 NM_001004707 NM_001005365 NM_001005387 NM_001005404 NM_001005737 NM_001006932 NM_001007024 NM_001007025 NM_001007279 NM_001008234 NM_001008396 NM_001008408 NM_001008493 NM_001008701 NM_001008745 NM_001009185 NM_001010846 NM_001010891 NM_001011666 NM_001012761 NM_001013685 NM_001013713 NM_001013723 NM_001014439 NM_001014831 NM_001014832 NM_001014833 NM_001014834 NM_001014835 NM_001015047 NM_001015880 NM_001017923 NM_001017930 NM_001017963 NM_001017970 NM_001017995 NM_001018058 NM_001018111 NM_001023563 NM_001023567 NM_001024592 NM_001024858 NM_001025076 NM_001025077 NM_001050 NM_001094 NM_001116 NM_001148 NM_001277 NM_001291 NM_001297 NM_001337 NM_001358 NM_001410 NM_001450 NM_001465 NM_001493 NM_001497 NM_001649 NM_001659 NM_001802 NM_001831 NM_001908 NM_001914 NM_001964 NM_001980 NM_001991 NM_002045 NM_002052 NM_002105 NM_002106 NM_002158 NM_002246 NM_002253 NM_002264 NM_002271 NM_002290 NM_002293 NM_002340 NM_002373 NM_002422 NM_002448 NM_002480 NM_002509 NM_002597 NM_002644 NM_002653 NM_002719 NM_002822 NM_002823 NM_002906 NM_002912 NM_002957 NM_002959 NM_003016 NM_003025 NM_003034 NM_003036 NM_003038 NM_003042 NM_003044 NM_003045 NM_003051 NM_003102 NM_003107 NM_003119 NM_003137 NM_003152 NM_003155 NM_003179 NM_003212 NM_003221 NM_003222 NM_003291 NM_003302 NM_003308 NM_003328 NM_003369 NM_003528 NM_003575 NM_003590 NM_003605 NM_003681 NM_003683 NM_003758 NM_003799 NM_003811 NM_003895 NM_003928 NM_003941 NM_003954 NM_004004 NM_004030 NM_004101 NM_004109 NM_004133 NM_004172 NM_004200 NM_004285 NM_004300 NM_004311 NM_004331 NM_004338 NM_004352 NM_004412 NM_004456 NM_004475 NM_004535 NM_004617 NM_004629 NM_004630 NM_004660 NM_004670 NM_004685 NM_004711 NM_004729 NM_004732 NM_004742 NM_004745 NM_004807 NM_004834 NM_004871 NM_004904 NM_004938 NM_004947 NM_004992 NM_005076 NM_005098 NM_005109 NM_005127 NM_005188 NM_005329 NM_005348 NM_005378 NM_005392 NM_005397 NM_005462 NM_005499 NM_005529 NM_005540 NM_005615 NM_005675 NM_005717 NM_005740 NM_005783 NM_005840 NM_005884 NM_005898 NM_005901 NM_005964 NM_005986 NM_005990 NM_006037 NM_006057 NM_006105 NM_006139 NM_006276 NM_006481 NM_006485 NM_006500 NM_006534 NM_006546 NM_006561 NM_006591 NM_006620 NM_006621 NM_006646 NM_006738 NM_006742 NM_006763 NM_006819 NM_006861 NM_006877 NM_006925 NM_006931 NM_007018 NM_007047 NM_007070 NM_007081 NM_007086 NM_007099 NM_007117 NM_007184 NM_007200 NM_007274 NM_007277 NM_007287 NM_007288 NM_007289 NM_007335 NM_007336 NM_007338 NM_007345 NM_007350 NM_007355 NM_012079 NM_012102 NM_012174 NM_012179 NM_012193 NM_012205 NM_012218 NM_012252 NM_012300 NM_012309 NM_012332 NM_012346 NM_012398 NM_012465 NM_012468 NM_013243 NM_013301 NM_013372 NM_013412 NM_013434 NM_014005 NM_014048 NM_014109 NM_014138 NM_014157 NM_014240 NM_014354 NM_014396 NM_014397 NM_014553 NM_014564 NM_014607 NM_014616 NM_014629 NM_014644 NM_014646 NM_014677 NM_014680 NM_014686 NM_014755 NM_014765 NM_014835 NM_014844 NM_014872 NM_014890 NM_014909 NM_014910 NM_014914 NM_014921 NM_015003 NM_015017 NM_015035 NM_015044 NM_015051 NM_015071 NM_015074 NM_015085 NM_015093 NM_015101 NM_015111 NM_015116 NM_015124 NM_015137 NM_015141 NM_015185 NM_015191 NM_015229 NM_015235 NM_015256 NM_015310 NM_015347 NM_015381 NM_015460 NM_015511 NM_015564 NM_015575 NM_015726 NM_015995 NM_016022 NM_016107 NM_016206 NM_016264 NM_016355 NM_016531 NM_016553 NM_016605 NM_016652 NM_016653 NM_016821 NM_016826 NM_016827 NM_016828 NM_016829 NM_017437 NM_017518 NM_017565 NM_017588 NM_017590 NM_017628 NM_017668 NM_017682 NM_017761 NM_018051 NM_018108 NM_018144 NM_018212 NM_018277 NM_018326 NM_018393 NM_018407 NM_018409 NM_018410 NM_018414 NM_018427 NM_018440 NM_018566 NM_018652 NM_018658 NM_018667 NM_018683 NM_018708 NM_018717 NM_018932 NM_018991 NM_018995 NM_019022 NM_019027 NM_019072 NM_019087 NM_019843 NM_020168 NM_020215 NM_020348 NM_020402 NM_020432 NM_020440 NM_020462 NM_020528 NM_020529 NM_020550 NM_020554 NM_020631 NM_020644 NM_020699 NM_020710 NM_020717 NM_020762 NM_020766 NM_020796 NM_020813 NM_020845 NM_020851 NM_020856 NM_020914 NM_020918 NM_020956 NM_020967 NM_020977 NM_020982 NM_021005 NM_021064 NM_021132 NM_021135 NM_021174 NM_021200 NM_021216 NM_021260 NM_021620 NM_021643 NM_021794 NM_021905 NM_021946 NM_022074 NM_022153 NM_022568 NM_022573 NM_022576 NM_022720 NM_022750 NM_022763 NM_022764 NM_022779 NM_022791 NM_022818 NM_022837 NM_022912 NM_023011 NM_023934 NM_024019 NM_024492 NM_024517 NM_024551 NM_024580 NM_024667 NM_024670 NM_024701 NM_024733 NM_024738 NM_024779 NM_024798 NM_024818 NM_024830 NM_024877 NM_024909 NM_025078 NM_025250 NM_025268 NM_030645 NM_030661 NM_030756 NM_030777 NM_030802 NM_030806 NM_030809 NM_030895 NM_030912 NM_030915 NM_030949 NM_030964 NM_031211 NM_031275 NM_031416 NM_031437 NM_031442 NM_031469 NM_031479 NM_031908 NM_031925 NM_032023 NM_032042 NM_032052 NM_032144 NM_032217 NM_032236 NM_032242 NM_032271 NM_032287 NM_032295 NM_032300 NM_032329 NM_032446 NM_032499 NM_032562 NM_032587 NM_032706 NM_032740 NM_032756 NM_032818 NM_032822 NM_033084 NM_033109 NM_033170 NM_033171 NM_033172 NM_033173 NM_033261 NM_033407 NM_033453 NM_033512 NM_033644 NM_033645 NM_033658 NM_033659 NM_052821 NM_052831 NM_052879 NM_052938 NM_052966 NM_053279 NM_057179 NM_058172 NM_058192 NM_078483 NM_080476 NM_080591 NM_080687 NM_080723 NM_080872 NM_080915 NM_080917 NM_080927 NM_130446 NM_130830 NM_133279 NM_133370 NM_133371 NM_133452 NM_134264 NM_134324 NM_134422 NM_134423 NM_134424 NM_138287 NM_138298 NM_138335 NM_138370 NM_138391 NM_138640 NM_138694 NM_139028 NM_139072 NM_139321 NM_144498 NM_144567 NM_144599 NM_144607 NM_144613 NM_144623 NM_144682 NM_144701 NM_144767 NM_144994 NM_145008 NM_145015 NM_145034 NM_145037 NM_145173 NM_145251 NM_145284 NM_145342 NM_145646 NM_145648 NM_145686 NM_145687 NM_145818 NM_147152 NM_147780 NM_147781 NM_147782 NM_147783 NM_148923 NM_152253 NM_152284 NM_152287 NM_152302 NM_152439 NM_152478 NM_152551 NM_152588 NM_152624 NM_152630 NM_152635 NM_152757 NM_152842 NM_152904 NM_152998 NM_153022 NM_153032 NM_153231 NM_153337 NM_153348 NM_153462 NM_153463 NM_153487 NM_153611 NM_153631 NM_153632 NM_153712 NM_153718 NM_153719 NM_170601 NM_170741 NM_170742 NM_170771 NM_172020 NM_173065 NM_173079 NM_173509 NM_173535 NM_173602 NM_173647 NM_173669 NM_173673 NM_173809 NM_173823 NM_173826 NM_173851 NM_174878 NM_174918 NM_174972 NM_175857 NM_175884 NM_175898 NM_175907 NM_176081 NM_176083 NM_176084 NM_176085 NM_176086 NM_176677 NM_177549 NM_177551 NM_177554 NM_177954 NM_177966 NM_177978 NM_178145 NM_178151 NM_178152 NM_178153 NM_178441 NM_178483 NM_178509 NM_178586 NM_178817 NM_178840 NM_181076 NM_181077 NM_181481 NM_181482 NM_181483 NM_181493 NM_181504 NM_181512 NM_181523 NM_181524 NM_181659 NM_181713 NM_181789 NM_181862 NM_181863 NM_181864 NM_181865 NM_181866 NM_182516 NM_182533 NM_182547 NM_182558 NM_182560 NM_182610 NM_182613 NM_182628 NM_182665 NM_182752 NM_182832 NM_182898 NM_182899 NM_182970 NM_183377 NM_183414 NM_194284 NM_194303 NM_194352 NM_194356 NM_197941 NM_197956 NM_198151 NM_198181 NM_198243 NM_198329 NM_198403 NM_198451 NM_198486 NM_198490 NM_198504 NM_198527 NM_198564 NM_198569 NM_198681 NM_198835 NM_198847 NM_198850 NM_198851 NM_198889 NM_198974 NM_199037 NM_199045 NM_199188 NM_199190 NM_199205 NM_199335 NM_201224 NM_201555 NM_201556 NM_201557 NM_201565 NM_201624 NM_203306 NM_203329 NM_203330 NM_203331 NM_203339 NM_203395 NM_203411 NM_203446 NM_203463 NM_206835 NM_206909 NM_207106 NM_207107 NM_207113 NM_207315 NM_207358 NM_207367 NM_207411 NM_207472 NM_207483 NM_207484 NM_207486 NM_207645 NM_212469 NM_213568 NM_213612 XM_016532 XM_031553 XM_032996 XM_037523 XM_047995 XM_050278 XM_051017 XM_051081 XM_051200 XM_084529 XM_096688 XM_209655 XM_209700 XM_290401 XM_290737 XM_290925 XM_292357 XM_293687 XM_294521 XM_294765 XM_294775 XM_295213 XM_370839 XM_370840 XM_370876 XM_370899 XM_371176 XM_371230 XM_371312 XM_371461 XM_371474 XM_371590 XM_371691 XM_372118 XM_372267 XM_373616 XM_373691 XM_373704 XM_373748 XM_373847 XM_374270 XM_375090 XM_375185 XM_375373 XM_375378 XM_375449 XM_375697 XM_375853 XM_375928 XM_376062 XM_376558 XM_376586 XM_376658 XM_377476 XM_377742 XM_378259 XM_378329 XM_378379 XM_378462 XM_378655 XM_378678 XM_378708 XM_378742 XM_378758 XM_378861 XM_379060 XM_379102 XM_379121 XM_379141 XM_379145 XM_379180 XM_379273 XM_379391 XM_379434 XM_379438 XM_379452 XM_379458 XM_379459 XM_379483 XM_379595 XM_379597 XM_379619 XM_379623 XM_379650 XM_379798 XM_379877 XM_379897 XM_379920 XM_380099 XM_495807 XM_495902 XM_496048 XM_496076 XM_496081 XM_496088 XM_496096 XM_496103 XM_496134 XM_496191 XM_496449 XM_496577 XM_496740 XM_496877 XM_496882 XM_496889 XM_496895 XM_496907 XM_496959 XM_496966 XM_497160 XM_498437 XM_498451 XM_498467 XM_498537 XM_498555 XM_498614 XM_498662 XM_498727 XM_498738 XM_498835 XM_498917 XM_498919 XM_498946 XM_499056 XM_499068 XM_499084 XM_499093 XM_499295 XM_499312 XM_499323 XM_499343 XM_499503 XM_499519 XM_499539 XM_499581 XM_499597 XM_499602 XR_000194 XR_000216 XR_000261 XR_000263 XR_000265 XR_000292	Genes with multiple seed matches: NM_000214 NM_000332 NM_000337 NM_000664 NM_000902 NM_001013685 NM_001024592 NM_001980 NM_002959 NM_003590 NM_003605 NM_003681 NM_004133 NM_004300 NM_005188 NM_007099 NM_007287 NM_007288 NM_007289 NM_007350 NM_012468 NM_013301 NM_014844 NM_015310 NM_015347 NM_020762 NM_020918 NM_021200 NM_022750 NM_024877 NM_025078 NM_031416 NM_032287 NM_032499 NM_134324 NM_144599 NM_144613 NM_144623 NM_174878 NM_177554 NM_194356 NM_198181 NM_198527 NM_198835 NM_207113 XM_051081 XM_294765 XM_370899 XM_375373 XM_496081 XM_496088 XM_496103 XM_496877 XM_498835 XR_000261 XR_000292

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA