VIRsiRNAdb

Predicted off-targets seeds for siRNA "guucaccuagauagcccgaua" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :860.
Total Genes with multiple seed matches: 42.
Genes with at least one seed match: NM_000038 NM_000059 NM_000093 NM_000103 NM_000133 NM_000173 NM_000210 NM_000226 NM_000243 NM_000248 NM_000351 NM_000511 NM_000533 NM_000599 NM_000611 NM_000627 NM_000641 NM_000682 NM_000702 NM_000726 NM_000744 NM_000795 NM_000835 NM_000843 NM_000876 NM_000885 NM_000887 NM_000891 NM_000894 NM_000952 NM_000991 NM_001001396 NM_001001414 NM_001001484 NM_001001502 NM_001001675 NM_001001686 NM_001001700 NM_001001873 NM_001001927 NM_001001928 NM_001001929 NM_001001930 NM_001002260 NM_001002814 NM_001003800 NM_001004285 NM_001004286 NM_001004313 NM_001004419 NM_001004420 NM_001005407 NM_001005746 NM_001005747 NM_001006603 NM_001006637 NM_001007026 NM_001007097 NM_001007156 NM_001007258 NM_001007262 NM_001007279 NM_001007466 NM_001008222 NM_001008493 NM_001008563 NM_001009553 NM_001009880 NM_001009939 NM_001010850 NM_001010866 NM_001010871 NM_001010898 NM_001010909 NM_001010917 NM_001012279 NM_001012727 NM_001013624 NM_001013673 NM_001013678 NM_001013706 NM_001013712 NM_001013724 NM_001014373 NM_001014839 NM_001014841 NM_001018053 NM_001018097 NM_001018103 NM_001018111 NM_001024218 NM_001024677 NM_001025295 NM_001044 NM_001083 NM_001127 NM_001150 NM_001174 NM_001189 NM_001190 NM_001238 NM_001340 NM_001360 NM_001419 NM_001420 NM_001421 NM_001431 NM_001432 NM_001451 NM_001611 NM_001668 NM_001684 NM_001724 NM_001736 NM_001806 NM_001830 NM_001852 NM_001940 NM_001978 NM_001992 NM_002033 NM_002065 NM_002117 NM_002122 NM_002150 NM_002200 NM_002309 NM_002346 NM_002359 NM_002378 NM_002417 NM_002479 NM_002523 NM_002569 NM_002570 NM_002579 NM_002605 NM_002622 NM_002634 NM_002688 NM_002739 NM_002819 NM_002840 NM_002843 NM_002957 NM_003016 NM_003042 NM_003048 NM_003085 NM_003104 NM_003110 NM_003216 NM_003309 NM_003314 NM_003320 NM_003325 NM_003326 NM_003371 NM_003388 NM_003392 NM_003449 NM_003479 NM_003486 NM_003502 NM_003592 NM_003596 NM_003598 NM_003600 NM_003639 NM_003670 NM_003681 NM_003786 NM_003834 NM_003839 NM_003862 NM_003870 NM_003872 NM_003983 NM_004058 NM_004082 NM_004090 NM_004093 NM_004104 NM_004200 NM_004207 NM_004220 NM_004235 NM_004285 NM_004316 NM_004320 NM_004321 NM_004324 NM_004380 NM_004421 NM_004445 NM_004459 NM_004527 NM_004549 NM_004609 NM_004612 NM_004653 NM_004673 NM_004675 NM_004720 NM_004729 NM_004740 NM_004758 NM_004762 NM_004797 NM_004838 NM_004861 NM_004864 NM_004926 NM_004960 NM_004981 NM_004992 NM_005036 NM_005041 NM_005076 NM_005082 NM_005086 NM_005095 NM_005188 NM_005197 NM_005202 NM_005206 NM_005253 NM_005297 NM_005304 NM_005312 NM_005318 NM_005397 NM_005402 NM_005428 NM_005500 NM_005677 NM_005682 NM_005780 NM_005814 NM_005834 NM_005840 NM_005863 NM_006047 NM_006094 NM_006122 NM_006185 NM_006262 NM_006275 NM_006315 NM_006338 NM_006353 NM_006412 NM_006444 NM_006465 NM_006477 NM_006481 NM_006487 NM_006505 NM_006532 NM_006538 NM_006546 NM_006549 NM_006556 NM_006599 NM_006614 NM_006617 NM_006624 NM_006646 NM_006676 NM_006678 NM_006708 NM_006711 NM_006722 NM_006732 NM_006742 NM_006805 NM_006925 NM_006940 NM_007030 NM_007146 NM_007148 NM_007171 NM_007189 NM_007331 NM_007371 NM_009588 NM_012092 NM_012140 NM_012218 NM_012231 NM_012232 NM_012268 NM_012468 NM_013231 NM_013255 NM_013269 NM_013280 NM_013325 NM_013382 NM_013435 NM_013999 NM_014062 NM_014190 NM_014216 NM_014235 NM_014284 NM_014312 NM_014326 NM_014365 NM_014418 NM_014427 NM_014442 NM_014562 NM_014573 NM_014604 NM_014610 NM_014636 NM_014667 NM_014671 NM_014690 NM_014704 NM_014732 NM_014737 NM_014747 NM_014787 NM_014792 NM_014798 NM_014835 NM_014848 NM_014930 NM_014956 NM_014972 NM_014991 NM_015064 NM_015077 NM_015086 NM_015107 NM_015245 NM_015254 NM_015264 NM_015266 NM_015289 NM_015299 NM_015318 NM_015330 NM_015338 NM_015359 NM_015409 NM_015438 NM_015440 NM_015481 NM_015526 NM_015559 NM_015568 NM_015722 NM_015898 NM_016032 NM_016063 NM_016066 NM_016075 NM_016114 NM_016354 NM_016389 NM_016511 NM_016570 NM_016574 NM_016598 NM_016647 NM_016734 NM_017438 NM_017456 NM_017509 NM_017521 NM_017550 NM_017553 NM_017592 NM_017621 NM_017656 NM_017721 NM_017723 NM_017740 NM_017775 NM_017784 NM_017879 NM_017921 NM_017999 NM_018188 NM_018193 NM_018198 NM_018212 NM_018264 NM_018389 NM_018444 NM_018579 NM_018667 NM_018999 NM_019001 NM_019060 NM_019085 NM_019885 NM_020037 NM_020038 NM_020062 NM_020170 NM_020213 NM_020214 NM_020223 NM_020245 NM_020309 NM_020314 NM_020550 NM_020631 NM_020638 NM_020663 NM_020684 NM_020715 NM_020751 NM_020792 NM_020806 NM_020814 NM_020826 NM_020856 NM_020884 NM_020919 NM_020939 NM_020956 NM_020971 NM_021044 NM_021045 NM_021078 NM_021098 NM_021101 NM_021116 NM_021159 NM_021202 NM_021255 NM_021260 NM_021570 NM_021806 NM_021950 NM_021965 NM_022047 NM_022049 NM_022062 NM_022107 NM_022152 NM_022170 NM_022343 NM_022449 NM_022479 NM_022737 NM_023006 NM_023019 NM_023072 NM_023926 NM_024015 NM_024022 NM_024050 NM_024052 NM_024069 NM_024110 NM_024325 NM_024327 NM_024342 NM_024515 NM_024616 NM_024637 NM_024709 NM_024779 NM_024784 NM_024787 NM_024792 NM_024848 NM_024850 NM_024877 NM_024909 NM_024989 NM_025160 NM_025213 NM_030626 NM_030643 NM_030664 NM_030766 NM_030777 NM_030968 NM_031226 NM_031426 NM_031461 NM_031476 NM_031484 NM_031990 NM_031991 NM_031992 NM_032039 NM_032108 NM_032153 NM_032196 NM_032281 NM_032350 NM_032375 NM_032401 NM_032404 NM_032421 NM_032432 NM_032440 NM_032466 NM_032468 NM_032643 NM_032682 NM_032689 NM_032711 NM_032765 NM_032826 NM_032843 NM_032848 NM_032861 NM_032866 NM_032920 NM_032950 NM_032961 NM_033036 NM_033045 NM_033118 NM_033127 NM_033130 NM_033240 NM_033244 NM_033245 NM_033377 NM_033378 NM_033387 NM_033420 NM_033421 NM_033430 NM_033437 NM_033446 NM_033504 NM_033649 NM_052832 NM_052847 NM_052876 NM_052909 NM_052953 NM_057182 NM_058195 NM_058197 NM_078471 NM_078476 NM_080391 NM_080538 NM_080539 NM_080540 NM_080541 NM_080542 NM_080543 NM_080544 NM_080590 NM_080594 NM_080607 NM_080614 NM_080625 NM_080751 NM_080789 NM_080790 NM_080792 NM_130440 NM_130459 NM_130830 NM_133265 NM_133445 NM_133468 NM_134422 NM_134423 NM_134424 NM_138319 NM_138415 NM_138434 NM_138450 NM_138462 NM_138563 NM_138564 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138713 NM_138714 NM_138802 NM_138966 NM_138983 NM_139016 NM_139076 NM_139179 NM_139265 NM_139321 NM_139354 NM_139355 NM_144498 NM_144564 NM_144599 NM_144603 NM_144606 NM_144617 NM_144654 NM_144677 NM_144679 NM_144692 NM_145011 NM_145013 NM_145045 NM_145265 NM_145304 NM_145349 NM_145351 NM_145659 NM_145660 NM_145699 NM_145730 NM_145872 NM_145912 NM_148171 NM_152235 NM_152477 NM_152506 NM_152511 NM_152605 NM_152622 NM_152630 NM_152641 NM_152689 NM_152769 NM_152838 NM_152866 NM_152868 NM_152890 NM_152897 NM_152989 NM_153181 NM_153233 NM_153239 NM_153499 NM_153500 NM_153636 NM_170773 NM_170774 NM_172020 NM_172216 NM_172226 NM_172346 NM_173080 NM_173201 NM_173214 NM_173454 NM_173455 NM_173456 NM_173457 NM_173558 NM_173578 NM_173617 NM_173661 NM_173826 NM_173832 NM_173854 NM_173855 NM_175738 NM_175847 NM_175895 NM_175898 NM_175913 NM_176801 NM_177427 NM_177972 NM_178010 NM_178034 NM_178037 NM_178038 NM_178039 NM_178040 NM_178326 NM_178426 NM_178427 NM_178441 NM_178448 NM_178568 NM_178585 NM_178831 NM_180991 NM_181050 NM_181351 NM_181522 NM_181525 NM_181530 NM_181706 NM_181727 NM_181870 NM_182509 NM_182516 NM_182534 NM_182546 NM_182606 NM_182641 NM_182643 NM_182779 NM_182894 NM_183337 NM_194249 NM_194313 NM_197962 NM_198138 NM_198147 NM_198158 NM_198159 NM_198177 NM_198178 NM_198274 NM_198334 NM_198335 NM_198433 NM_198434 NM_198435 NM_198436 NM_198437 NM_198476 NM_198537 NM_198554 NM_198576 NM_198593 NM_198594 NM_198679 NM_198681 NM_198682 NM_198955 NM_199135 NM_199186 NM_199265 NM_199280 NM_199296 NM_199358 NM_199423 NM_199461 NM_199478 NM_201266 NM_201279 NM_201524 NM_201525 NM_201628 NM_201630 NM_203318 NM_203329 NM_203330 NM_203331 NM_203371 NM_203375 NM_203403 NM_203423 NM_205855 NM_206887 NM_206943 NM_207003 NM_207305 NM_207335 NM_207351 NM_207372 NM_207386 NM_207391 NM_207432 NM_207440 NM_207482 NM_207483 NM_207491 NM_212556 NM_214711 XM_028810 XM_036936 XM_036942 XM_041126 XM_058628 XM_059689 XM_065166 XM_117294 XM_171054 XM_208522 XM_208847 XM_371204 XM_371429 XM_372038 XM_372267 XM_373765 XM_374069 XM_374112 XM_375018 XM_375500 XM_376567 XM_376720 XM_376722 XM_377742 XM_378247 XM_378321 XM_378356 XM_378389 XM_378390 XM_378421 XM_378606 XM_378623 XM_378653 XM_378700 XM_378777 XM_378793 XM_378810 XM_378908 XM_378964 XM_379060 XM_379086 XM_379121 XM_379146 XM_379194 XM_379214 XM_379309 XM_379363 XM_379434 XM_379459 XM_379474 XM_379664 XM_379665 XM_379774 XM_379967 XM_380089 XM_495807 XM_495939 XM_496239 XM_496280 XM_496328 XM_496330 XM_496481 XM_496773 XM_496895 XM_496942 XM_498436 XM_498437 XM_498545 XM_498578 XM_498649 XM_498666 XM_498683 XM_498817 XM_498897 XM_498933 XM_498965 XM_499130 XM_499182 XM_499323 XM_499391 XM_499501 XM_499566 XR_000192 XR_000265 XR_000268	Genes with multiple seed matches: NM_000611 NM_000876 NM_001001396 NM_001007026 NM_001420 NM_001684 NM_001940 NM_003388 NM_003834 NM_003983 NM_004093 NM_004992 NM_005076 NM_006546 NM_007030 NM_012232 NM_015898 NM_020038 NM_020170 NM_020956 NM_024792 NM_025160 NM_030626 NM_032281 NM_032421 NM_033387 NM_080625 NM_130830 NM_144654 NM_144677 NM_152506 NM_178448 NM_183337 NM_198274 NM_198955 NM_203329 NM_203330 NM_203331 NM_207372 NM_207432 XM_376720 XM_379967

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA