VIRsiRNAdb

Predicted off-targets seeds for siRNA "agguucggaugguucggga" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1289.
Total Genes with multiple seed matches: 70.
Genes with at least one seed match: NM_000037 NM_000048 NM_000051 NM_000067 NM_000135 NM_000189 NM_000221 NM_000252 NM_000268 NM_000293 NM_000314 NM_000376 NM_000398 NM_000441 NM_000451 NM_000545 NM_000565 NM_000574 NM_000577 NM_000598 NM_000609 NM_000635 NM_000664 NM_000744 NM_000780 NM_000793 NM_000843 NM_000896 NM_000907 NM_000912 NM_000916 NM_000923 NM_000931 NM_000960 NM_000962 NM_001001188 NM_001001349 NM_001001436 NM_001001675 NM_001001690 NM_001001694 NM_001001851 NM_001001927 NM_001001974 NM_001002260 NM_001002799 NM_001002861 NM_001003656 NM_001003679 NM_001003807 NM_001003845 NM_001003940 NM_001003941 NM_001003942 NM_001003943 NM_001004301 NM_001004302 NM_001004315 NM_001004318 NM_001004342 NM_001004345 NM_001005158 NM_001005159 NM_001005303 NM_001005353 NM_001005386 NM_001005387 NM_001005388 NM_001005404 NM_001005407 NM_001005505 NM_001005737 NM_001005766 NM_001006665 NM_001006946 NM_001007023 NM_001007088 NM_001007169 NM_001007543 NM_001008409 NM_001008493 NM_001008528 NM_001008661 NM_001008662 NM_001008701 NM_001008801 NM_001010846 NM_001010850 NM_001010851 NM_001010864 NM_001010866 NM_001010867 NM_001010898 NM_001010925 NM_001012393 NM_001012502 NM_001012644 NM_001012715 NM_001012982 NM_001013000 NM_001013005 NM_001013398 NM_001013404 NM_001013617 NM_001013622 NM_001013637 NM_001013640 NM_001013644 NM_001013655 NM_001013671 NM_001013677 NM_001013685 NM_001013688 NM_001013701 NM_001013726 NM_001013727 NM_001014380 NM_001014440 NM_001014797 NM_001014809 NM_001015070 NM_001017395 NM_001017523 NM_001017535 NM_001017916 NM_001017917 NM_001017918 NM_001017989 NM_001018064 NM_001018072 NM_001018111 NM_001018159 NM_001018160 NM_001023565 NM_001024074 NM_001024401 NM_001024599 NM_001024608 NM_001024808 NM_001024858 NM_001024933 NM_001024943 NM_001024944 NM_001024946 NM_001024956 NM_001025076 NM_001025077 NM_001025100 NM_001025193 NM_001025233 NM_001049 NM_001066 NM_001092 NM_001114 NM_001127 NM_001167 NM_001189 NM_001219 NM_001243 NM_001254 NM_001259 NM_001282 NM_001291 NM_001306 NM_001313 NM_001332 NM_001340 NM_001346 NM_001356 NM_001386 NM_001420 NM_001439 NM_001524 NM_001536 NM_001650 NM_001659 NM_001662 NM_001672 NM_001678 NM_001699 NM_001709 NM_001790 NM_001806 NM_001843 NM_001844 NM_001845 NM_001915 NM_001941 NM_001955 NM_001969 NM_001995 NM_002026 NM_002068 NM_002088 NM_002105 NM_002154 NM_002198 NM_002232 NM_002290 NM_002302 NM_002319 NM_002359 NM_002371 NM_002405 NM_002481 NM_002545 NM_002576 NM_002596 NM_002600 NM_002610 NM_002613 NM_002634 NM_002699 NM_002716 NM_002737 NM_002758 NM_002834 NM_002847 NM_002848 NM_002938 NM_002953 NM_002957 NM_002997 NM_003003 NM_003012 NM_003036 NM_003128 NM_003155 NM_003217 NM_003234 NM_003239 NM_003263 NM_003348 NM_003369 NM_003378 NM_003382 NM_003404 NM_003462 NM_003498 NM_003629 NM_003644 NM_003646 NM_003655 NM_003657 NM_003681 NM_003683 NM_003766 NM_003808 NM_003834 NM_003856 NM_003872 NM_003898 NM_003905 NM_003924 NM_003926 NM_003950 NM_003955 NM_004028 NM_004030 NM_004064 NM_004093 NM_004160 NM_004170 NM_004173 NM_004209 NM_004210 NM_004265 NM_004273 NM_004292 NM_004302 NM_004316 NM_004367 NM_004380 NM_004409 NM_004417 NM_004418 NM_004419 NM_004423 NM_004430 NM_004437 NM_004454 NM_004494 NM_004505 NM_004518 NM_004524 NM_004539 NM_004560 NM_004612 NM_004630 NM_004655 NM_004711 NM_004716 NM_004717 NM_004745 NM_004755 NM_004759 NM_004776 NM_004824 NM_004840 NM_004892 NM_004899 NM_004907 NM_004914 NM_004947 NM_004959 NM_004960 NM_004968 NM_004992 NM_005007 NM_005027 NM_005030 NM_005034 NM_005056 NM_005082 NM_005093 NM_005098 NM_005126 NM_005134 NM_005147 NM_005157 NM_005178 NM_005188 NM_005197 NM_005224 NM_005255 NM_005258 NM_005264 NM_005369 NM_005387 NM_005397 NM_005402 NM_005415 NM_005427 NM_005453 NM_005491 NM_005506 NM_005519 NM_005547 NM_005561 NM_005583 NM_005590 NM_005591 NM_005604 NM_005611 NM_005618 NM_005647 NM_005658 NM_005683 NM_005722 NM_005723 NM_005736 NM_005738 NM_005806 NM_005879 NM_005883 NM_005933 NM_005935 NM_005941 NM_005986 NM_005990 NM_006021 NM_006030 NM_006033 NM_006038 NM_006045 NM_006086 NM_006103 NM_006114 NM_006180 NM_006208 NM_006237 NM_006282 NM_006306 NM_006315 NM_006452 NM_006459 NM_006472 NM_006488 NM_006500 NM_006561 NM_006651 NM_006732 NM_006752 NM_006809 NM_006814 NM_006826 NM_006877 NM_006890 NM_006898 NM_006914 NM_006918 NM_006927 NM_006943 NM_006946 NM_006962 NM_007014 NM_007023 NM_007078 NM_007162 NM_007168 NM_007189 NM_007313 NM_007326 NM_007335 NM_007336 NM_007338 NM_007353 NM_007359 NM_007368 NM_012073 NM_012075 NM_012102 NM_012155 NM_012192 NM_012204 NM_012232 NM_012237 NM_012282 NM_012324 NM_012337 NM_012391 NM_012410 NM_012429 NM_012453 NM_012479 NM_013262 NM_013275 NM_013336 NM_013347 NM_013385 NM_013386 NM_013388 NM_013397 NM_013410 NM_013943 NM_013981 NM_013989 NM_014067 NM_014157 NM_014178 NM_014207 NM_014231 NM_014232 NM_014271 NM_014299 NM_014358 NM_014409 NM_014425 NM_014586 NM_014587 NM_014631 NM_014649 NM_014653 NM_014661 NM_014665 NM_014690 NM_014699 NM_014700 NM_014713 NM_014723 NM_014757 NM_014758 NM_014779 NM_014798 NM_014830 NM_014836 NM_014858 NM_014859 NM_014864 NM_014867 NM_014869 NM_014870 NM_014909 NM_014911 NM_014919 NM_014921 NM_014924 NM_014926 NM_014957 NM_015008 NM_015015 NM_015020 NM_015025 NM_015039 NM_015044 NM_015056 NM_015060 NM_015066 NM_015079 NM_015090 NM_015115 NM_015116 NM_015124 NM_015150 NM_015184 NM_015229 NM_015245 NM_015246 NM_015270 NM_015288 NM_015292 NM_015305 NM_015326 NM_015347 NM_015353 NM_015409 NM_015426 NM_015449 NM_015508 NM_015517 NM_015518 NM_015530 NM_015556 NM_015568 NM_015570 NM_015892 NM_015894 NM_015898 NM_015949 NM_015985 NM_015995 NM_016073 NM_016132 NM_016219 NM_016224 NM_016329 NM_016357 NM_016376 NM_016396 NM_016417 NM_016418 NM_016426 NM_016431 NM_016463 NM_016474 NM_016525 NM_016531 NM_016544 NM_016575 NM_016601 NM_016615 NM_016621 NM_016735 NM_016932 NM_017558 NM_017590 NM_017595 NM_017617 NM_017670 NM_017709 NM_017732 NM_017734 NM_017740 NM_017745 NM_017770 NM_017784 NM_017787 NM_017790 NM_017805 NM_017828 NM_017882 NM_017888 NM_017891 NM_017896 NM_017952 NM_017968 NM_017982 NM_017991 NM_018097 NM_018198 NM_018201 NM_018212 NM_018227 NM_018240 NM_018260 NM_018271 NM_018287 NM_018314 NM_018332 NM_018346 NM_018370 NM_018385 NM_018389 NM_018390 NM_018400 NM_018425 NM_018427 NM_018461 NM_018667 NM_018689 NM_018706 NM_018833 NM_018941 NM_018953 NM_018992 NM_019001 NM_019061 NM_019085 NM_019089 NM_019106 NM_019555 NM_019613 NM_019892 NM_020125 NM_020127 NM_020162 NM_020170 NM_020182 NM_020201 NM_020215 NM_020227 NM_020228 NM_020311 NM_020443 NM_020448 NM_020472 NM_020473 NM_020475 NM_020476 NM_020477 NM_020526 NM_020531 NM_020548 NM_020651 NM_020695 NM_020713 NM_020734 NM_020761 NM_020768 NM_020803 NM_020804 NM_020805 NM_020813 NM_020830 NM_020831 NM_020836 NM_020851 NM_020866 NM_020892 NM_020983 NM_020993 NM_021093 NM_021098 NM_021116 NM_021117 NM_021134 NM_021138 NM_021148 NM_021155 NM_021168 NM_021250 NM_021253 NM_021619 NM_021622 NM_021638 NM_021649 NM_021783 NM_021812 NM_021813 NM_021913 NM_021945 NM_021960 NM_021961 NM_021962 NM_022071 NM_022080 NM_022121 NM_022307 NM_022308 NM_022438 NM_022439 NM_022440 NM_022483 NM_022728 NM_022746 NM_022764 NM_022772 NM_022809 NM_022822 NM_022900 NM_023011 NM_023032 NM_023067 NM_023109 NM_024092 NM_024097 NM_024100 NM_024108 NM_024301 NM_024317 NM_024342 NM_024423 NM_024514 NM_024525 NM_024536 NM_024541 NM_024545 NM_024551 NM_024592 NM_024596 NM_024618 NM_024646 NM_024652 NM_024674 NM_024733 NM_024738 NM_024745 NM_024757 NM_024761 NM_024837 NM_024866 NM_024874 NM_024911 NM_024924 NM_024944 NM_025074 NM_025090 NM_025106 NM_025112 NM_025124 NM_025182 NM_025196 NM_025201 NM_025237 NM_030569 NM_030593 NM_030626 NM_030665 NM_030667 NM_030668 NM_030669 NM_030670 NM_030671 NM_030787 NM_030806 NM_030817 NM_030885 NM_030895 NM_031208 NM_031211 NM_031215 NM_031268 NM_031409 NM_031418 NM_031426 NM_031435 NM_031453 NM_031460 NM_031462 NM_031476 NM_031483 NM_031896 NM_031945 NM_031988 NM_032042 NM_032105 NM_032115 NM_032116 NM_032124 NM_032160 NM_032164 NM_032281 NM_032287 NM_032289 NM_032291 NM_032294 NM_032301 NM_032317 NM_032333 NM_032358 NM_032366 NM_032499 NM_032501 NM_032529 NM_032538 NM_032564 NM_032646 NM_032682 NM_032706 NM_032709 NM_032711 NM_032721 NM_032752 NM_032782 NM_032785 NM_032813 NM_032817 NM_032818 NM_032824 NM_032832 NM_032840 NM_032853 NM_032855 NM_032899 NM_032947 NM_032958 NM_032959 NM_032960 NM_032976 NM_032988 NM_033036 NM_033052 NM_033064 NM_033131 NM_033150 NM_033161 NM_033229 NM_033274 NM_033318 NM_033393 NM_033405 NM_033412 NM_033503 NM_033510 NM_033631 NM_033658 NM_052812 NM_052816 NM_052847 NM_052859 NM_052869 NM_052896 NM_052919 NM_052931 NM_052996 NM_053056 NM_053286 NM_057177 NM_058167 NM_078483 NM_080282 NM_080415 NM_080417 NM_080552 NM_080591 NM_080600 NM_080611 NM_080618 NM_080625 NM_080669 NM_080671 NM_080687 NM_080733 NM_080734 NM_080735 NM_080832 NM_130446 NM_130770 NM_130809 NM_130842 NM_130843 NM_133332 NM_133333 NM_133507 NM_133625 NM_133640 NM_133646 NM_134433 NM_138288 NM_138292 NM_138298 NM_138356 NM_138368 NM_138415 NM_138423 NM_138471 NM_138473 NM_138499 NM_138640 NM_138706 NM_138740 NM_138761 NM_138763 NM_138764 NM_138765 NM_138799 NM_138934 NM_139124 NM_139131 NM_139176 NM_139177 NM_139239 NM_139323 NM_144579 NM_144639 NM_144667 NM_144671 NM_144765 NM_144974 NM_144991 NM_144992 NM_145042 NM_145068 NM_145117 NM_145175 NM_145178 NM_145179 NM_145232 NM_145257 NM_145308 NM_145310 NM_145323 NM_145324 NM_145719 NM_145730 NM_145793 NM_152275 NM_152287 NM_152289 NM_152322 NM_152339 NM_152458 NM_152583 NM_152632 NM_152705 NM_152737 NM_152777 NM_152783 NM_152860 NM_152903 NM_152942 NM_153025 NM_153031 NM_153214 NM_153238 NM_153239 NM_153320 NM_153335 NM_153344 NM_153360 NM_153365 NM_153375 NM_153379 NM_153442 NM_153451 NM_153685 NM_153708 NM_170706 NM_170731 NM_170732 NM_170733 NM_170734 NM_170735 NM_170751 NM_170752 NM_171982 NM_172016 NM_172087 NM_172088 NM_172089 NM_172206 NM_172364 NM_173342 NM_173359 NM_173459 NM_173473 NM_173479 NM_173513 NM_173535 NM_173548 NM_173551 NM_173623 NM_173651 NM_173660 NM_173673 NM_173823 NM_173826 NM_173833 NM_173841 NM_173842 NM_173843 NM_174934 NM_174977 NM_175038 NM_175709 NM_175864 NM_175898 NM_175901 NM_175913 NM_175921 NM_175922 NM_176853 NM_176871 NM_177401 NM_177427 NM_177974 NM_177978 NM_177979 NM_177991 NM_178034 NM_178120 NM_178129 NM_178493 NM_178502 NM_178505 NM_178509 NM_178516 NM_178520 NM_178543 NM_178569 NM_178571 NM_178578 NM_178579 NM_178816 NM_178830 NM_178836 NM_181041 NM_181336 NM_181359 NM_181484 NM_181491 NM_181571 NM_181713 NM_181722 NM_181826 NM_181827 NM_181828 NM_181829 NM_181830 NM_181832 NM_181833 NM_181834 NM_181835 NM_181846 NM_181985 NM_182553 NM_182556 NM_182562 NM_182570 NM_182584 NM_182595 NM_182700 NM_182717 NM_182718 NM_182719 NM_182720 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 NM_182763 NM_182769 NM_182770 NM_182771 NM_182772 NM_182850 NM_182853 NM_182964 NM_183004 NM_183011 NM_183012 NM_183013 NM_183060 NM_183245 NM_183337 NM_194286 NM_194299 NM_194315 NM_194316 NM_194319 NM_194324 NM_194457 NM_194458 NM_198074 NM_198079 NM_198157 NM_198225 NM_198318 NM_198319 NM_198402 NM_198431 NM_198458 NM_198484 NM_198502 NM_198545 NM_198547 NM_198553 NM_198564 NM_198582 NM_198595 NM_198835 NM_198859 NM_198956 NM_198971 NM_199050 NM_199054 NM_199131 NM_199132 NM_199169 NM_199170 NM_199171 NM_199176 NM_199182 NM_199191 NM_199192 NM_199193 NM_199194 NM_199245 NM_199343 NM_199424 NM_199437 NM_199438 NM_199439 NM_201266 NM_201279 NM_201432 NM_201433 NM_201532 NM_201533 NM_201565 NM_201575 NM_201628 NM_201995 NM_201998 NM_203342 NM_203343 NM_203400 NM_203412 NM_203436 NM_203464 NM_206828 NM_207117 NM_207309 NM_207313 NM_207333 NM_207351 NM_207370 NM_207442 NM_207446 NM_207495 NM_207504 NM_207510 NM_207581 NM_212460 NM_212474 NM_212475 NM_212476 NM_212478 NM_212482 NM_212502 NM_212503 NM_213651 NM_214711 XM_028810 XM_032945 XM_034872 XM_038436 XM_039877 XM_042698 XM_045421 XM_051081 XM_054983 XM_055866 XM_058628 XM_065166 XM_066058 XM_084852 XM_087353 XM_087386 XM_087672 XM_166320 XM_172995 XM_173087 XM_208835 XM_209429 XM_209640 XM_290546 XM_290842 XM_290948 XM_291170 XM_295213 XM_350880 XM_370696 XM_370839 XM_370849 XM_370944 XM_371214 XM_371374 XM_371423 XM_371569 XM_371783 XM_371797 XM_372019 XM_372121 XM_372233 XM_373631 XM_373865 XM_373914 XM_373973 XM_373981 XM_374134 XM_374249 XM_375065 XM_375443 XM_376269 XM_376558 XM_376588 XM_377028 XM_377742 XM_378312 XM_378460 XM_378487 XM_378628 XM_378655 XM_378692 XM_378698 XM_378756 XM_378777 XM_378787 XM_378883 XM_378908 XM_378983 XM_379029 XM_379041 XM_379075 XM_379145 XM_379156 XM_379164 XM_379276 XM_379363 XM_379381 XM_379391 XM_379406 XM_379434 XM_379483 XM_379484 XM_379535 XM_379541 XM_379634 XM_379637 XM_379664 XM_379665 XM_379800 XM_379920 XM_380099 XM_380100 XM_380160 XM_495909 XM_495939 XM_495996 XM_496041 XM_496044 XM_496134 XM_496346 XM_496349 XM_496408 XM_496431 XM_496659 XM_496688 XM_496849 XM_496943 XM_497002 XM_497062 XM_497080 XM_498454 XM_498474 XM_498502 XM_498511 XM_498528 XM_498561 XM_498563 XM_498582 XM_498614 XM_498624 XM_498631 XM_498649 XM_498652 XM_498681 XM_498728 XM_498739 XM_498825 XM_498835 XM_498853 XM_498878 XM_498894 XM_498958 XM_498972 XM_499007 XM_499021 XM_499054 XM_499093 XM_499142 XM_499169 XM_499185 XM_499257 XM_499499 XM_499583 XR_000190	Genes with multiple seed matches: NM_000037 NM_001001188 NM_001001690 NM_001001927 NM_001002861 NM_001005387 NM_001008701 NM_001013726 NM_001024401 NM_001049 NM_001955 NM_002105 NM_002847 NM_002957 NM_004030 NM_004292 NM_004380 NM_004437 NM_004518 NM_004539 NM_004655 NM_005415 NM_012479 NM_014690 NM_014867 NM_014921 NM_014957 NM_015015 NM_015044 NM_015353 NM_018346 NM_020227 NM_020475 NM_020476 NM_020477 NM_020526 NM_020713 NM_020805 NM_020851 NM_021116 NM_021649 NM_025106 NM_025112 NM_030806 NM_031945 NM_032853 NM_032988 NM_033064 NM_033161 NM_033274 NM_052847 NM_078483 NM_130842 NM_130843 NM_138640 NM_153025 NM_175898 NM_178836 NM_194299 NM_199245 NM_203342 NM_203343 NM_207510 XM_209429 XM_378655 XM_379391 XM_379664 XM_379665 XM_495909 XM_498649

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA