VIRsiRNAdb

Predicted off-targets seeds for siRNA "aucggagcuucgucgaaug" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :919.
Total Genes with multiple seed matches: 35.
Genes with at least one seed match: NM_000163 NM_000176 NM_000182 NM_000192 NM_000261 NM_000262 NM_000303 NM_000305 NM_000326 NM_000332 NM_000334 NM_000335 NM_000452 NM_000525 NM_000560 NM_000573 NM_000587 NM_000603 NM_000610 NM_000615 NM_000633 NM_000651 NM_000663 NM_000668 NM_000761 NM_000844 NM_000851 NM_000867 NM_000907 NM_000918 NM_000997 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001001419 NM_001001420 NM_001001557 NM_001001664 NM_001001677 NM_001001686 NM_001001871 NM_001001878 NM_001001891 NM_001002019 NM_001002020 NM_001002257 NM_001002762 NM_001002811 NM_001002812 NM_001003407 NM_001003408 NM_001004298 NM_001004330 NM_001004345 NM_001005386 NM_001005463 NM_001005474 NM_001006657 NM_001006946 NM_001007278 NM_001007546 NM_001008215 NM_001008234 NM_001008541 NM_001008726 NM_001008781 NM_001009909 NM_001009913 NM_001009938 NM_001010866 NM_001010882 NM_001010883 NM_001010909 NM_001010986 NM_001011541 NM_001012320 NM_001012707 NM_001012753 NM_001013619 NM_001013629 NM_001013682 NM_001013698 NM_001013848 NM_001014380 NM_001015047 NM_001017920 NM_001018065 NM_001018066 NM_001018074 NM_001018075 NM_001018076 NM_001018077 NM_001018161 NM_001023563 NM_001024094 NM_001024683 NM_001024858 NM_001025233 NM_001036 NM_001039 NM_001110 NM_001112 NM_001116 NM_001138 NM_001146 NM_001167 NM_001174 NM_001177 NM_001189 NM_001198 NM_001248 NM_001387 NM_001412 NM_001415 NM_001419 NM_001430 NM_001432 NM_001530 NM_001537 NM_001547 NM_001609 NM_001617 NM_001619 NM_001634 NM_001638 NM_001733 NM_001806 NM_001821 NM_001901 NM_001912 NM_001933 NM_001942 NM_001955 NM_001957 NM_001961 NM_001969 NM_002017 NM_002035 NM_002099 NM_002130 NM_002163 NM_002247 NM_002249 NM_002264 NM_002310 NM_002313 NM_002374 NM_002389 NM_002402 NM_002531 NM_002628 NM_002716 NM_002725 NM_002814 NM_002819 NM_002852 NM_002919 NM_002941 NM_002956 NM_002957 NM_002997 NM_003004 NM_003032 NM_003045 NM_003048 NM_003124 NM_003137 NM_003204 NM_003281 NM_003343 NM_003373 NM_003379 NM_003404 NM_003411 NM_003412 NM_003431 NM_003479 NM_003480 NM_003568 NM_003605 NM_003632 NM_003633 NM_003644 NM_003679 NM_003685 NM_003774 NM_003783 NM_003842 NM_003846 NM_003848 NM_003855 NM_003856 NM_003953 NM_004035 NM_004064 NM_004113 NM_004133 NM_004155 NM_004208 NM_004223 NM_004272 NM_004360 NM_004369 NM_004431 NM_004488 NM_004502 NM_004503 NM_004518 NM_004545 NM_004578 NM_004582 NM_004590 NM_004612 NM_004619 NM_004673 NM_004697 NM_004707 NM_004717 NM_004776 NM_004795 NM_004821 NM_004921 NM_004995 NM_005042 NM_005077 NM_005157 NM_005187 NM_005197 NM_005259 NM_005296 NM_005333 NM_005347 NM_005399 NM_005414 NM_005416 NM_005436 NM_005441 NM_005475 NM_005504 NM_005540 NM_005550 NM_005569 NM_005593 NM_005595 NM_005668 NM_005669 NM_005671 NM_005722 NM_005737 NM_005789 NM_005798 NM_005844 NM_005876 NM_005902 NM_005903 NM_005924 NM_005962 NM_005968 NM_006007 NM_006141 NM_006322 NM_006330 NM_006359 NM_006380 NM_006393 NM_006459 NM_006464 NM_006465 NM_006503 NM_006566 NM_006587 NM_006620 NM_006622 NM_006698 NM_006720 NM_006738 NM_006773 NM_006822 NM_006828 NM_006895 NM_006981 NM_006990 NM_007036 NM_007083 NM_007084 NM_007148 NM_007200 NM_007271 NM_007292 NM_007306 NM_007313 NM_007316 NM_007354 NM_012097 NM_012121 NM_012296 NM_012309 NM_012407 NM_012448 NM_013230 NM_013246 NM_013255 NM_013308 NM_013337 NM_013374 NM_013386 NM_013423 NM_013427 NM_014000 NM_014023 NM_014048 NM_014285 NM_014325 NM_014333 NM_014360 NM_014432 NM_014451 NM_014504 NM_014612 NM_014670 NM_014704 NM_014761 NM_014795 NM_014797 NM_014829 NM_014864 NM_014865 NM_014880 NM_014887 NM_014910 NM_014917 NM_014926 NM_014936 NM_015027 NM_015033 NM_015047 NM_015064 NM_015079 NM_015097 NM_015137 NM_015141 NM_015192 NM_015215 NM_015288 NM_015315 NM_015336 NM_015353 NM_015359 NM_015458 NM_015550 NM_015560 NM_015565 NM_015621 NM_015635 NM_015833 NM_016002 NM_016018 NM_016076 NM_016144 NM_016166 NM_016217 NM_016275 NM_016335 NM_016340 NM_016356 NM_016376 NM_016389 NM_016396 NM_016422 NM_016426 NM_016619 NM_016733 NM_017409 NM_017437 NM_017483 NM_017485 NM_017486 NM_017488 NM_017540 NM_017623 NM_017644 NM_017728 NM_017738 NM_017760 NM_017768 NM_017778 NM_017902 NM_017953 NM_017990 NM_018015 NM_018057 NM_018109 NM_018176 NM_018199 NM_018204 NM_018228 NM_018247 NM_018266 NM_018285 NM_018325 NM_018327 NM_018332 NM_018424 NM_018443 NM_018476 NM_018498 NM_018652 NM_018728 NM_018976 NM_018999 NM_019053 NM_019069 NM_019089 NM_019094 NM_019604 NM_020127 NM_020135 NM_020148 NM_020184 NM_020247 NM_020374 NM_020416 NM_020423 NM_020429 NM_020438 NM_020686 NM_020697 NM_020762 NM_020779 NM_020802 NM_020803 NM_020826 NM_020832 NM_020859 NM_020909 NM_020956 NM_021032 NM_021242 NM_021251 NM_021646 NM_021818 NM_021932 NM_021960 NM_022050 NM_022131 NM_022147 NM_022351 NM_022358 NM_022473 NM_022648 NM_022753 NM_022803 NM_022836 NM_022843 NM_023083 NM_023084 NM_023085 NM_023086 NM_023087 NM_023088 NM_024026 NM_024076 NM_024090 NM_024116 NM_024335 NM_024503 NM_024548 NM_024569 NM_024571 NM_024646 NM_024647 NM_024656 NM_024691 NM_024738 NM_024749 NM_024878 NM_024891 NM_024910 NM_024917 NM_024958 NM_025195 NM_025215 NM_030579 NM_030627 NM_030772 NM_030781 NM_030817 NM_030948 NM_030961 NM_031203 NM_031265 NM_031275 NM_031305 NM_031309 NM_031419 NM_031448 NM_031481 NM_031485 NM_031490 NM_031845 NM_031846 NM_031847 NM_031886 NM_031990 NM_031991 NM_032012 NM_032041 NM_032116 NM_032322 NM_032328 NM_032374 NM_032435 NM_032446 NM_032486 NM_032492 NM_032710 NM_032740 NM_032809 NM_032813 NM_032836 NM_032876 NM_033031 NM_033389 NM_033551 NM_033670 NM_033671 NM_052811 NM_052851 NM_052910 NM_052939 NM_052999 NM_053024 NM_054031 NM_057164 NM_057165 NM_057166 NM_057167 NM_058197 NM_058219 NM_078628 NM_080491 NM_080666 NM_080717 NM_080737 NM_080867 NM_080872 NM_130395 NM_130439 NM_130771 NM_130809 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837 NM_133168 NM_133169 NM_133266 NM_133448 NM_133631 NM_138280 NM_138333 NM_138337 NM_138428 NM_138450 NM_138473 NM_138492 NM_138636 NM_138694 NM_138809 NM_138934 NM_139073 NM_139167 NM_139323 NM_144597 NM_144632 NM_144648 NM_144669 NM_144676 NM_144693 NM_144714 NM_144767 NM_144778 NM_144974 NM_145012 NM_145064 NM_145271 NM_145291 NM_145320 NM_145321 NM_145322 NM_145323 NM_145324 NM_145328 NM_145735 NM_145759 NM_145804 NM_145812 NM_145813 NM_145918 NM_147187 NM_148960 NM_152225 NM_152280 NM_152429 NM_152461 NM_152495 NM_152565 NM_152571 NM_152583 NM_152588 NM_152615 NM_152655 NM_152667 NM_152680 NM_152716 NM_152754 NM_152793 NM_153001 NM_153013 NM_153027 NM_153034 NM_153043 NM_153207 NM_153261 NM_153360 NM_153453 NM_153613 NM_153649 NM_153683 NM_153693 NM_153712 NM_153826 NM_170710 NM_170750 NM_170782 NM_172024 NM_172069 NM_172193 NM_172208 NM_172346 NM_172350 NM_172351 NM_172352 NM_172353 NM_172354 NM_172355 NM_172356 NM_172357 NM_172358 NM_172359 NM_172360 NM_172361 NM_173178 NM_173198 NM_173200 NM_173216 NM_173217 NM_173362 NM_173459 NM_173511 NM_173519 NM_173536 NM_173538 NM_173557 NM_173617 NM_173649 NM_173667 NM_173675 NM_173694 NM_173698 NM_173823 NM_173851 NM_174911 NM_174933 NM_174972 NM_175571 NM_175847 NM_175910 NM_175913 NM_175931 NM_176863 NM_176871 NM_177524 NM_177525 NM_177967 NM_177985 NM_178006 NM_178007 NM_178025 NM_178037 NM_178038 NM_178039 NM_178040 NM_178135 NM_178815 NM_178839 NM_181054 NM_181093 NM_181265 NM_181268 NM_181269 NM_181270 NM_181271 NM_181272 NM_181283 NM_181285 NM_181286 NM_181287 NM_181288 NM_181289 NM_181290 NM_181292 NM_181293 NM_181294 NM_181295 NM_181296 NM_181297 NM_181298 NM_181299 NM_181300 NM_181301 NM_181349 NM_181351 NM_181486 NM_181690 NM_181698 NM_181787 NM_181874 NM_181876 NM_182499 NM_182551 NM_182562 NM_182615 NM_182631 NM_182645 NM_182688 NM_182700 NM_182734 NM_182763 NM_182798 NM_182799 NM_182801 NM_182907 NM_182960 NM_183004 NM_183387 NM_183414 NM_194294 NM_194310 NM_194314 NM_194317 NM_194439 NM_197939 NM_198041 NM_198056 NM_198086 NM_198181 NM_198183 NM_198240 NM_198317 NM_198321 NM_198428 NM_198461 NM_198462 NM_198484 NM_198499 NM_198513 NM_198525 NM_198539 NM_198555 NM_198851 NM_198887 NM_198956 NM_198991 NM_199000 NM_199040 NM_199078 NM_199126 NM_199206 NM_199421 NM_199450 NM_201348 NM_201432 NM_201433 NM_201623 NM_201625 NM_203301 NM_203371 NM_203374 NM_203395 NM_205846 NM_206817 NM_206818 NM_206831 NM_206832 NM_206834 NM_207304 NM_207359 NM_207362 NM_207467 NM_207478 NM_207481 NM_207499 NM_212557 NM_213590 NM_213612 NM_213651 XM_028810 XM_032278 XM_032996 XM_035299 XM_045290 XM_048898 XM_166132 XM_166320 XM_209640 XM_211367 XM_211805 XM_290342 XM_290936 XM_291017 XM_292357 XM_292963 XM_294521 XM_294765 XM_350880 XM_370536 XM_370876 XM_370899 XM_371461 XM_371711 XM_371783 XM_372118 XM_373433 XM_373513 XM_373847 XM_373950 XM_374070 XM_374078 XM_375697 XM_375838 XM_376372 XM_376560 XM_376677 XM_376905 XM_378379 XM_378389 XM_378411 XM_378421 XM_378456 XM_378512 XM_378606 XM_378643 XM_378703 XM_378708 XM_378758 XM_378760 XM_378982 XM_378993 XM_379069 XM_379190 XM_379260 XM_379267 XM_379276 XM_379288 XM_379459 XM_379477 XM_379484 XM_379530 XM_379573 XM_379619 XM_379643 XM_379931 XM_380092 XM_380100 XM_380154 XM_495882 XM_495937 XM_495950 XM_496028 XM_496054 XM_496076 XM_496081 XM_496088 XM_496103 XM_496351 XM_496654 XM_496661 XM_496690 XM_496692 XM_496849 XM_497002 XM_497080 XM_498443 XM_498449 XM_498454 XM_498459 XM_498481 XM_498555 XM_498611 XM_498706 XM_498774 XM_498824 XM_498841 XM_499085 XM_499147 XM_499257 XM_499573 XM_499579 XM_499583 XM_499589 XM_499602 XR_000167 XR_000217 XR_000265	Genes with multiple seed matches: NM_001003407 NM_001003408 NM_001012753 NM_001014380 NM_001116 NM_002313 NM_004921 NM_006720 NM_012309 NM_015192 NM_015215 NM_015336 NM_022351 NM_022473 NM_024738 NM_032041 NM_032116 NM_052851 NM_058219 NM_152793 NM_173667 NM_173823 NM_178006 NM_178007 NM_182700 NM_182734 NM_198555 NM_198851 NM_198956 NM_199000 XM_294521 XM_350880 XM_375838 XM_378703 XM_498481

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA