VIRsiRNAdb

Predicted off-targets seeds for siRNA "ggagaaagcguucguuauc" Using siRNA Seed Locator Algorithm

siRNA Seed Locator
Total Genes with at least one seed match :1010.
Total Genes with multiple seed matches: 56.
Genes with at least one seed match: NM_000015 NM_000052 NM_000071 NM_000091 NM_000094 NM_000109 NM_000222 NM_000235 NM_000242 NM_000254 NM_000296 NM_000330 NM_000344 NM_000345 NM_000347 NM_000361 NM_000430 NM_000448 NM_000503 NM_000522 NM_000555 NM_000617 NM_000629 NM_000636 NM_000719 NM_000834 NM_000857 NM_000885 NM_000907 NM_000933 NM_000956 NM_000961 NM_000966 NM_001001419 NM_001001420 NM_001001433 NM_001001434 NM_001001557 NM_001001684 NM_001001691 NM_001001700 NM_001001702 NM_001001711 NM_001001723 NM_001001928 NM_001001929 NM_001001930 NM_001001971 NM_001002034 NM_001002256 NM_001002258 NM_001002909 NM_001002924 NM_001003406 NM_001003407 NM_001003408 NM_001003698 NM_001003699 NM_001004301 NM_001004306 NM_001005410 NM_001005411 NM_001006623 NM_001006636 NM_001007097 NM_001007255 NM_001007256 NM_001007257 NM_001007466 NM_001007543 NM_001007595 NM_001008493 NM_001008539 NM_001008544 NM_001009553 NM_001009610 NM_001009944 NM_001010846 NM_001010850 NM_001010883 NM_001010910 NM_001010915 NM_001010971 NM_001012329 NM_001012393 NM_001012415 NM_001012958 NM_001012968 NM_001012977 NM_001013688 NM_001013701 NM_001014764 NM_001015038 NM_001015887 NM_001017923 NM_001017979 NM_001018089 NM_001018090 NM_001018091 NM_001018092 NM_001018093 NM_001018094 NM_001018097 NM_001018098 NM_001018102 NM_001024460 NM_001024465 NM_001024466 NM_001024654 NM_001024655 NM_001024948 NM_001024959 NM_001024960 NM_001025096 NM_001025097 NM_001046 NM_001049 NM_001083 NM_001124 NM_001183 NM_001204 NM_001206 NM_001270 NM_001286 NM_001296 NM_001320 NM_001360 NM_001386 NM_001387 NM_001401 NM_001417 NM_001429 NM_001430 NM_001585 NM_001627 NM_001689 NM_001792 NM_001798 NM_001831 NM_001858 NM_001859 NM_001905 NM_001910 NM_001918 NM_001933 NM_002071 NM_002125 NM_002140 NM_002166 NM_002232 NM_002261 NM_002298 NM_002313 NM_002353 NM_002397 NM_002399 NM_002402 NM_002416 NM_002545 NM_002546 NM_002581 NM_002629 NM_002649 NM_002718 NM_002719 NM_002725 NM_002745 NM_002756 NM_002760 NM_002828 NM_002838 NM_002845 NM_002847 NM_002871 NM_002873 NM_002882 NM_002886 NM_002897 NM_002912 NM_002923 NM_002946 NM_002955 NM_002993 NM_003023 NM_003024 NM_003032 NM_003042 NM_003045 NM_003046 NM_003071 NM_003084 NM_003099 NM_003108 NM_003112 NM_003137 NM_003150 NM_003165 NM_003215 NM_003257 NM_003269 NM_003274 NM_003371 NM_003392 NM_003444 NM_003455 NM_003458 NM_003489 NM_003565 NM_003575 NM_003677 NM_003682 NM_003714 NM_003763 NM_003794 NM_003828 NM_003887 NM_003913 NM_003983 NM_004006 NM_004007 NM_004009 NM_004010 NM_004011 NM_004012 NM_004013 NM_004014 NM_004015 NM_004016 NM_004017 NM_004018 NM_004020 NM_004021 NM_004022 NM_004023 NM_004060 NM_004073 NM_004090 NM_004124 NM_004136 NM_004161 NM_004184 NM_004237 NM_004273 NM_004316 NM_004331 NM_004337 NM_004393 NM_004420 NM_004454 NM_004498 NM_004571 NM_004584 NM_004637 NM_004762 NM_004869 NM_004898 NM_004956 NM_004960 NM_005026 NM_005036 NM_005075 NM_005201 NM_005225 NM_005241 NM_005296 NM_005400 NM_005441 NM_005465 NM_005669 NM_005688 NM_005711 NM_005718 NM_005739 NM_005766 NM_005836 NM_005899 NM_005903 NM_005914 NM_005924 NM_005931 NM_005965 NM_006011 NM_006017 NM_006021 NM_006074 NM_006166 NM_006210 NM_006216 NM_006223 NM_006237 NM_006253 NM_006283 NM_006291 NM_006298 NM_006380 NM_006449 NM_006520 NM_006538 NM_006572 NM_006595 NM_006602 NM_006624 NM_006682 NM_006697 NM_006710 NM_006717 NM_006720 NM_006725 NM_006753 NM_006835 NM_006852 NM_006861 NM_006925 NM_006931 NM_006981 NM_006987 NM_007048 NM_007106 NM_007185 NM_007211 NM_007308 NM_012072 NM_012097 NM_012105 NM_012173 NM_012184 NM_012199 NM_012257 NM_012259 NM_012288 NM_012347 NM_012381 NM_012397 NM_012419 NM_012424 NM_012448 NM_012463 NM_012482 NM_013231 NM_013233 NM_013255 NM_013352 NM_013357 NM_013385 NM_013943 NM_013995 NM_014048 NM_014057 NM_014106 NM_014286 NM_014301 NM_014363 NM_014388 NM_014393 NM_014437 NM_014552 NM_014567 NM_014571 NM_014616 NM_014671 NM_014680 NM_014746 NM_014751 NM_014792 NM_014819 NM_014835 NM_014854 NM_014859 NM_014876 NM_014879 NM_014885 NM_014904 NM_014905 NM_014906 NM_014920 NM_014934 NM_014946 NM_014962 NM_014965 NM_015003 NM_015025 NM_015027 NM_015029 NM_015032 NM_015051 NM_015056 NM_015064 NM_015085 NM_015087 NM_015102 NM_015144 NM_015170 NM_015206 NM_015252 NM_015265 NM_015277 NM_015296 NM_015344 NM_015354 NM_015432 NM_015458 NM_015460 NM_015523 NM_015532 NM_015626 NM_015666 NM_015836 NM_015866 NM_015938 NM_015994 NM_016018 NM_016019 NM_016083 NM_016120 NM_016205 NM_016255 NM_016282 NM_016359 NM_016436 NM_016513 NM_016529 NM_016836 NM_016839 NM_017411 NM_017423 NM_017431 NM_017456 NM_017512 NM_017636 NM_017651 NM_017736 NM_017737 NM_017778 NM_017847 NM_017850 NM_017861 NM_017863 NM_017933 NM_017953 NM_017956 NM_017968 NM_017988 NM_018046 NM_018120 NM_018157 NM_018181 NM_018211 NM_018212 NM_018222 NM_018228 NM_018266 NM_018287 NM_018298 NM_018330 NM_018361 NM_018390 NM_018399 NM_018444 NM_018454 NM_018462 NM_018590 NM_018669 NM_018696 NM_018700 NM_018834 NM_018841 NM_018931 NM_018951 NM_019000 NM_019001 NM_019002 NM_019061 NM_019094 NM_019555 NM_019556 NM_019613 NM_020130 NM_020149 NM_020151 NM_020182 NM_020184 NM_020245 NM_020248 NM_020341 NM_020367 NM_020379 NM_020384 NM_020385 NM_020403 NM_020438 NM_020448 NM_020455 NM_020524 NM_020648 NM_020661 NM_020673 NM_020751 NM_020754 NM_020762 NM_020805 NM_020830 NM_020909 NM_021026 NM_021035 NM_021064 NM_021083 NM_021096 NM_021101 NM_021141 NM_021148 NM_021155 NM_021187 NM_021201 NM_021217 NM_021235 NM_021269 NM_021614 NM_021642 NM_021735 NM_021736 NM_021737 NM_021965 NM_021970 NM_022066 NM_022080 NM_022081 NM_022463 NM_022739 NM_022769 NM_022786 NM_022874 NM_022875 NM_022876 NM_022877 NM_023076 NM_023110 NM_023938 NM_024295 NM_024416 NM_024430 NM_024512 NM_024527 NM_024607 NM_024611 NM_024628 NM_024635 NM_024650 NM_024659 NM_024729 NM_024761 NM_024766 NM_024803 NM_024833 NM_024847 NM_024869 NM_024876 NM_024878 NM_024882 NM_024910 NM_024920 NM_024948 NM_024960 NM_025076 NM_025130 NM_025201 NM_025243 NM_030569 NM_030574 NM_030621 NM_030627 NM_030665 NM_030775 NM_030787 NM_030885 NM_030918 NM_030949 NM_030952 NM_031211 NM_031262 NM_031263 NM_031298 NM_031304 NM_031308 NM_031362 NM_031363 NM_031364 NM_031365 NM_031366 NM_031445 NM_031469 NM_031858 NM_031862 NM_031887 NM_031888 NM_032102 NM_032160 NM_032228 NM_032242 NM_032294 NM_032354 NM_032368 NM_032424 NM_032446 NM_032479 NM_032493 NM_032642 NM_032728 NM_032772 NM_032817 NM_032833 NM_032838 NM_032899 NM_033014 NM_033128 NM_033181 NM_033211 NM_033272 NM_033346 NM_033393 NM_033400 NM_033430 NM_033437 NM_033480 NM_033481 NM_033656 NM_052827 NM_052840 NM_052904 NM_052966 NM_053025 NM_053026 NM_053027 NM_053028 NM_053029 NM_053030 NM_053031 NM_053032 NM_057159 NM_058172 NM_078625 NM_080650 NM_080654 NM_080867 NM_080876 NM_080921 NM_080922 NM_080923 NM_130470 NM_130471 NM_130472 NM_130473 NM_130474 NM_130475 NM_130476 NM_130842 NM_130843 NM_133334 NM_133338 NM_133339 NM_133340 NM_133341 NM_133342 NM_133343 NM_133344 NM_133474 NM_133477 NM_134264 NM_134265 NM_134434 NM_138371 NM_138372 NM_138384 NM_138492 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_138781 NM_138934 NM_138991 NM_138992 NM_139015 NM_139267 NM_139276 NM_144498 NM_144633 NM_144662 NM_144689 NM_144721 NM_144982 NM_145109 NM_145110 NM_145255 NM_145260 NM_145284 NM_145646 NM_145650 NM_148887 NM_148955 NM_148964 NM_152235 NM_152270 NM_152333 NM_152366 NM_152395 NM_152424 NM_152538 NM_152547 NM_152588 NM_152608 NM_152615 NM_152624 NM_152630 NM_152638 NM_152643 NM_152687 NM_152694 NM_152765 NM_152826 NM_152840 NM_152841 NM_152842 NM_152991 NM_152999 NM_153027 NM_153044 NM_153256 NM_153347 NM_153367 NM_153381 NM_153451 NM_153607 NM_153637 NM_153638 NM_153639 NM_153640 NM_153641 NM_153683 NM_153686 NM_153688 NM_153715 NM_153757 NM_170674 NM_170675 NM_170676 NM_170677 NM_170744 NM_170775 NM_172058 NM_172059 NM_172060 NM_172070 NM_172206 NM_172315 NM_172316 NM_173198 NM_173200 NM_173216 NM_173217 NM_173463 NM_173511 NM_173515 NM_173551 NM_173580 NM_173599 NM_173611 NM_173621 NM_173632 NM_173651 NM_173657 NM_173701 NM_173808 NM_174902 NM_174914 NM_174936 NM_175063 NM_175085 NM_175610 NM_175733 NM_175898 NM_176084 NM_176085 NM_176086 NM_176789 NM_176799 NM_176811 NM_177438 NM_177453 NM_177524 NM_177525 NM_177966 NM_177985 NM_177990 NM_178037 NM_178038 NM_178039 NM_178040 NM_178151 NM_178152 NM_178153 NM_178175 NM_178497 NM_178542 NM_178565 NM_178586 NM_178842 NM_178863 NM_181076 NM_181077 NM_181443 NM_181621 NM_181705 NM_181837 NM_181897 NM_182583 NM_182595 NM_182746 NM_182791 NM_182797 NM_182960 NM_182975 NM_182978 NM_183065 NM_183353 NM_183376 NM_183420 NM_183421 NM_194282 NM_194285 NM_194298 NM_194314 NM_194325 NM_194327 NM_198182 NM_198189 NM_198215 NM_198266 NM_198499 NM_198513 NM_198569 NM_198582 NM_198850 NM_198968 NM_199040 NM_199054 NM_199169 NM_199170 NM_199171 NM_199182 NM_199189 NM_199246 NM_199343 NM_199358 NM_199421 NM_199436 NM_199461 NM_201263 NM_201348 NM_201563 NM_203339 NM_203348 NM_203349 NM_203381 NM_203425 NM_203487 NM_205846 NM_206538 NM_206853 NM_206854 NM_206855 NM_206938 NM_206939 NM_206940 NM_207003 NM_207015 NM_207035 NM_207303 NM_207318 NM_207333 NM_207339 NM_207446 NM_207470 NM_207477 NM_212558 NM_213595 NM_213645 NM_213646 NM_213662 XM_027236 XM_029101 XM_030378 XM_031553 XM_031689 XM_034872 XM_038436 XM_047355 XM_048898 XM_051264 XM_087225 XM_087490 XM_093839 XM_114415 XM_114973 XM_117294 XM_211287 XM_291095 XM_294765 XM_370696 XM_371132 XM_371204 XM_371369 XM_371838 XM_372200 XM_372227 XM_372248 XM_372267 XM_373472 XM_373713 XM_373973 XM_374012 XM_374132 XM_376254 XM_376386 XM_376412 XM_376454 XM_376550 XM_376616 XM_378184 XM_378203 XM_378240 XM_378368 XM_378430 XM_378620 XM_378643 XM_378876 XM_378883 XM_379029 XM_379041 XM_379068 XM_379075 XM_379145 XM_379215 XM_379235 XM_379318 XM_379391 XM_379402 XM_379458 XM_379482 XM_379540 XM_379592 XM_379634 XM_379637 XM_379665 XM_379843 XM_379844 XM_380098 XM_495888 XM_496054 XM_496088 XM_496436 XM_496467 XM_497185 XM_498451 XM_498464 XM_498466 XM_498625 XM_498724 XM_498757 XM_498758 XM_498760 XM_498761 XM_498765 XM_498766 XM_498767 XM_498768 XM_498769 XM_498770 XM_498771 XM_498772 XM_498773 XM_498774 XM_498777 XM_498778 XM_498779 XM_498780 XM_498781 XM_498782 XM_498783 XM_498784 XM_498785 XM_498786 XM_498789 XM_498801 XM_498802 XM_498804 XM_498831 XM_498876 XM_498886 XM_498894 XM_498898 XM_499105 XM_499110 XM_499182 XM_499581 XM_499594 XM_499596 XR_000227	Genes with multiple seed matches: NM_001004306 NM_001008539 NM_001010910 NM_001204 NM_001430 NM_002399 NM_003046 NM_003108 NM_003112 NM_003137 NM_003714 NM_003913 NM_005465 NM_006011 NM_006981 NM_013231 NM_014057 NM_015144 NM_016019 NM_020149 NM_020182 NM_020448 NM_021155 NM_024295 NM_024416 NM_024761 NM_025201 NM_033014 NM_033346 NM_033656 NM_080650 NM_080876 NM_133334 NM_144982 NM_152624 NM_153686 NM_170674 NM_170675 NM_170676 NM_170677 NM_172315 NM_172316 NM_173198 NM_173200 NM_173611 NM_173621 NM_175733 NM_183376 NM_199169 NM_199170 NM_199171 XM_372267 XM_376454 XM_376550 XM_379592 XM_499105

For Details about the algorithm please see
"3' UTR seed matches, but not overall identity, are associated with RNAi off-targets" ,Nature Methods - 3, 199 - 204 (2006)

VIRsiRNAdb

Database of Viral siRNA / shRNA